Carubv10019945m.g (Capsella rubella)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03514 (GRAS) IPR005202 Carubv10019945m.g T202364_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Carubv10019945m GRAS 256 636

Links

Other GRAS family TFs
Other Capsella rubella TFs

26 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cagra.9501s0015 Capsella grandiflora Cagra.9501s0015 N 0.984
SCL28 Arabidopsis thaliana AT1G63100 N 0.975
Bostr.22157s0011 Boechera stricta Bostr.22157s0011 N 0.975
fgenesh1_pg.C_scaffold_2000170 Arabidopsis lyrata fgenesh1_pg.C_scaffold_2000170 N 0.973
Thhalv10023324m.g Eutrema salsugineum Thhalv10023324m.g N 0.946
Bra026999 Brassica rapa Bra026999 N 0.856
Bo00795s120 Brassica oleracea Bo00795s120 N 0.853
Bo9g028850 Brassica oleracea Bo9g028850 N 0.853
Bra027620 Brassica rapa Bra027620 N 0.845
30190.m011131 Ricinus communis 30190.m011131 N 0.741
orange1.1g005954m.g Citrus sinensis orange1.1g005954m.g N 0.734
Ciclev10019186m.g Citrus clementina Ciclev10019186m.g N 0.730
POPTR_0001s08850 Populus trichocarpa POPTR_0001s08850 N 0.723
evm.TU.supercontig_74.80 Carica papaya evm.TU.supercontig_74.80 N 0.722
cassava2243.valid.m1 Manihot esculenta cassava2243.valid.m1 N 0.722
cassava41178.m1 Manihot esculenta cassava41178.m1 N 0.722
Pm023754 Prunus mume Pm023754 N 0.715
TCM_016186 Theobroma cacao TCM_016186 N 0.714
SapurV1A.0507s0230 Salix purpurea SapurV1A.0507s0230 N 0.712
PRUPE_ppa017030mg Prunus persica PRUPE_ppa017030mg N 0.711
PK26305.1 Cannabis sativa PK26305.1 N 0.710
POPTR_0003s12240 Populus trichocarpa POPTR_0003s12240 N 0.710
Gorai.008G243900 Gossypium raimondii Gorai.008G243900 N 0.707
Eucgr.D01917 Eucalyptus grandis Eucgr.D01917 N 0.706
VIT_02s0025g04000 Vitis vinifera VIT_02s0025g04000 N 0.706
SapurV1A.1081s0090 Salix purpurea SapurV1A.1081s0090 N 0.704