OBART02G29970 (Oryza barthii)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03195 (DUF260) IPR004883 OBART02G29970 T245534_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
OBART02G29970.1 LOB 1 52

Links

Other LOB family TFs
Other Oryza barthii TFs

92 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ORUFI02G31640 Oryza rufipogon ORUFI02G31640 N 0.962
ORGLA02G0255200 Oryza glaberrima ORGLA02G0255200 N 0.942
ORGLA05G0108100 Oryza glaberrima ORGLA05G0108100 I 0.865
OBART05G12620 Oryza barthii OBART05G12620 I 0.865
Sb09g016240 Sorghum bicolor Sb09g016240 I 0.865
Pavir.J22399 Panicum virgatum Pavir.J22399 I 0.865
Pavir.J21476 Panicum virgatum Pavir.J21476 I 0.865
Pavir.Ca01985 Panicum virgatum Pavir.Ca01985 I 0.865
GRMZM2G044150 Zea mays GRMZM2G044150 I 0.865
Si024229m.g Setaria italica Si024229m.g I 0.865
mgf018189m Mimulus guttatus mgf018189m I 0.846
ONIVA04G09470 Oryza nivara ONIVA04G09470 N 0.827
MDP0000265429 Malus domestica MDP0000265429 I 0.827
Solyc06g082310.2 Solanum lycopersicum Solyc06g082310.2 I 0.827
OBART04G11480 Oryza barthii OBART04G11480 N 0.827
evm.TU.supercontig_19.133 Carica papaya evm.TU.supercontig_19.133 I 0.827
PGSC0003DMG400030456 Solanum tuberosum PGSC0003DMG400030456 I 0.827
PDK_20s1810211g001 Phoenix dactylifera PDK_20s1810211g001 I 0.827
Lus10031285.g Linum usitatissimum Lus10031285.g I 0.808
MDP0000861160 Malus domestica MDP0000861160 I 0.808
orange1.1g036782m.g Citrus sinensis orange1.1g036782m.g I 0.808
Gorai.011G290800 Gossypium raimondii Gorai.011G290800 I 0.808
Pavir.J18260 Panicum virgatum Pavir.J18260 I 0.808
Gorai.003G149600 Gossypium raimondii Gorai.003G149600 I 0.808
Si026864m.g Setaria italica Si026864m.g I 0.808
Si011647m.g Setaria italica Si011647m.g I 0.808
TCM_042447 Theobroma cacao TCM_042447 I 0.808
BGIOSGA016336 Oryza indica BGIOSGA016336 N 0.808
Ciclev10032929m.g Citrus clementina Ciclev10032929m.g I 0.808
GLYMA18G02780 Glycine max GLYMA18G02780 I 0.788
Sb05g000550 Sorghum bicolor Sb05g000550 I 0.788
Ciclev10029962m.g Citrus clementina Ciclev10029962m.g I 0.788
Cucsa.144430 Cucumis sativus Cucsa.144430 I 0.788
Sb08g000575 Sorghum bicolor Sb08g000575 I 0.788
Cla007354 Citrullus lanatus Cla007354 I 0.788
PRUPE_ppa012504mg Prunus persica PRUPE_ppa012504mg I 0.788
ASL5 Vitis vinifera VIT_06s0004g07200 I 0.788
TCM_042212 Theobroma cacao TCM_042212 I 0.788
GLYMA11G29450 Glycine max GLYMA11G29450 I 0.788
Pm018982 Prunus mume Pm018982 I 0.788
POPTR_0010s19180 Populus trichocarpa POPTR_0010s19180 I 0.788
SapurV1A.0673s0190 Salix purpurea SapurV1A.0673s0190 I 0.788
orange1.1g038565m.g Citrus sinensis orange1.1g038565m.g I 0.788
SapurV1A.0061s0670 Salix purpurea SapurV1A.0061s0670 I 0.788
Gorai.004G234100 Gossypium raimondii Gorai.004G234100 I 0.788
PDK_20s1728161g001 Phoenix dactylifera PDK_20s1728161g001 I 0.788
POPTR_0008s07280 Populus trichocarpa POPTR_0008s07280 I 0.788
VIT_13s0067g01880 Vitis vinifera VIT_13s0067g01880 I 0.769
cassava26200.m1 Manihot esculenta cassava26200.m1 I 0.769
Ca_13388 Cicer arietinum Ca_13388 I 0.769
GSMUA_Achr9G18030_001 Musa acuminata GSMUA_Achr9G18030_001 I 0.769
gene21039-v1.0-hybrid Fragaria vesca gene21039-v1.0-hybrid I 0.769
PK09808.1 Cannabis sativa PK09808.1 I 0.769
evm.TU.supercontig_2.374 Carica papaya evm.TU.supercontig_2.374 I 0.769
MTR_3g071590 Medicago truncatula MTR_3g071590 I 0.769
GLYMA02G43030 Glycine max GLYMA02G43030 I 0.769
Thhalv10017267m.g Eutrema salsugineum Thhalv10017267m.g I 0.750
Eucgr.J00175 Eucalyptus grandis Eucgr.J00175 I 0.750
Carubv10025543m.g Capsella rubella Carubv10025543m.g I 0.750
BGIOSGA036857 Oryza indica BGIOSGA036857 I 0.750
BGIOSGA034653 Oryza indica BGIOSGA034653 I 0.750
chr6.CM0738.260.nd Lotus japonicus chr6.CM0738.260.nd I 0.750
Traes_5BL_CE4CF3B5C Triticum aestivum Traes_5BL_CE4CF3B5C I 0.750
ORUFI11G00360 Oryza rufipogon ORUFI11G00360 N 0.750
OS11G0106900 Oryza sativa OS11G0106900 I 0.750
OS12G0106200 Oryza sativa OS12G0106200 I 0.750
Bra018335 Brassica rapa Bra018335 I 0.750
Bostr.29246s0022 Boechera stricta Bostr.29246s0022 I 0.750
F775_08326 Aegilops tauschii F775_08326 I 0.750
ORGLA11G0005800 Oryza glaberrima ORGLA11G0005800 I 0.750
MTR_5g083230 Medicago truncatula MTR_5g083230 I 0.750
ASL5 Arabidopsis lyrata fgenesh2_kg.4__983__AT2G30130.1 I 0.750
TRIUR3_11082 Triticum urartu TRIUR3_11082 I 0.750
GSMUA_Achr3G10050_001 Musa acuminata GSMUA_Achr3G10050_001 I 0.750
Bo4g059700 Brassica oleracea Bo4g059700 I 0.750
LBD12 Arabidopsis thaliana AT2G30130 I 0.750
MLOC_5148 Hordeum vulgare MLOC_5148 I 0.750
POPTR_0001s28840 Populus trichocarpa POPTR_0001s28840 I 0.750
SapurV1A.0042s0120 Salix purpurea SapurV1A.0042s0120 I 0.731
GRMZM2G025989 Zea mays GRMZM2G025989 I 0.731
OGLUM12G00350 Oryza glumaepatula OGLUM12G00350 I 0.731
OMERI03G13500 Oryza meridionalis OMERI03G13500 N 0.731
ORGLA12G0001500 Oryza glaberrima ORGLA12G0001500 I 0.731
Eucgr.B03991 Eucalyptus grandis Eucgr.B03991 I 0.731
PGSC0003DMG400023939 Solanum tuberosum PGSC0003DMG400023939 I 0.731
Gorai.009G112900 Gossypium raimondii Gorai.009G112900 I 0.731
Ca_08998 Cicer arietinum Ca_08998 I 0.731
PDK_20s1342451g001 Phoenix dactylifera PDK_20s1342451g001 I 0.712
POPTR_0009s08060 Populus trichocarpa POPTR_0009s08060 I 0.712
BRADI4G44850 Brachypodium distachyon BRADI4G44850 I 0.712
OPUNC12G00430 Oryza punctata OPUNC12G00430 I 0.712
GSMUA_Achr5G29470_001 Musa acuminata GSMUA_Achr5G29470_001 I 0.712