LjSGA_062507.1.1 (Lotus japonicus)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03195 (DUF260) IPR004883 LjSGA_062507.1.1 T247446_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
gw1.238.28.1
M02262_2.00 		Physcomitrella patens
NNNNNVNGSN
NSCNBNNNNN		 PBM
Weirauch et al.(2014)
pTH8459 		0.724 0.724
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
LjSGA_062507.1.1 LOB 1 29

Links

Other LOB family TFs
Other Lotus japonicus TFs

99 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GLYMA11G29450 Glycine max GLYMA11G29450 I 0.931
GSMUA_Achr9G18030_001 Musa acuminata GSMUA_Achr9G18030_001 I 0.931
ASL5 Vitis vinifera VIT_06s0004g07200 I 0.931
TCM_042212 Theobroma cacao TCM_042212 I 0.931
GSMUA_Achr3G10050_001 Musa acuminata GSMUA_Achr3G10050_001 I 0.931
Gorai.003G149600 Gossypium raimondii Gorai.003G149600 I 0.931
Carubv10025543m.g Capsella rubella Carubv10025543m.g I 0.897
mgf018189m Mimulus guttatus mgf018189m I 0.897
Cucsa.144430 Cucumis sativus Cucsa.144430 I 0.897
Cla007354 Citrullus lanatus Cla007354 I 0.897
POPTR_0010s19180 Populus trichocarpa POPTR_0010s19180 I 0.897
POPTR_0008s07280 Populus trichocarpa POPTR_0008s07280 I 0.897
LBD12 Arabidopsis thaliana AT2G30130 I 0.897
TCM_042447 Theobroma cacao TCM_042447 I 0.897
POPTR_0001s28840 Populus trichocarpa POPTR_0001s28840 I 0.897
VIT_13s0067g01880 Vitis vinifera VIT_13s0067g01880 I 0.897
cassava26200.m1 Manihot esculenta cassava26200.m1 I 0.897
Ciclev10029962m.g Citrus clementina Ciclev10029962m.g I 0.897
Thhalv10017267m.g Eutrema salsugineum Thhalv10017267m.g I 0.897
SapurV1A.0061s0670 Salix purpurea SapurV1A.0061s0670 I 0.897
SapurV1A.0673s0190 Salix purpurea SapurV1A.0673s0190 I 0.897
Bra018335 Brassica rapa Bra018335 I 0.897
ASL5 Arabidopsis lyrata fgenesh2_kg.4__983__AT2G30130.1 I 0.897
orange1.1g038565m.g Citrus sinensis orange1.1g038565m.g I 0.897
PDK_20s1810211g001 Phoenix dactylifera PDK_20s1810211g001 I 0.897
Bo4g059700 Brassica oleracea Bo4g059700 I 0.897
Gorai.009G112900 Gossypium raimondii Gorai.009G112900 I 0.897
Gorai.011G290800 Gossypium raimondii Gorai.011G290800 I 0.897
Si024229m.g Setaria italica Si024229m.g I 0.862
PDK_20s1342451g001 Phoenix dactylifera PDK_20s1342451g001 I 0.862
Ca_08998 Cicer arietinum Ca_08998 I 0.862
Lus10031285.g Linum usitatissimum Lus10031285.g I 0.862
MDP0000265429 Malus domestica MDP0000265429 I 0.862
Ca_13388 Cicer arietinum Ca_13388 I 0.862
evm.TU.supercontig_2.374 Carica papaya evm.TU.supercontig_2.374 I 0.862
Sb09g016240 Sorghum bicolor Sb09g016240 I 0.862
GLYMA02G43030 Glycine max GLYMA02G43030 I 0.862
ORGLA05G0108100 Oryza glaberrima ORGLA05G0108100 I 0.862
MTR_3g071590 Medicago truncatula MTR_3g071590 I 0.862
MTR_5g083230 Medicago truncatula MTR_5g083230 I 0.862
OBART05G12620 Oryza barthii OBART05G12620 I 0.862
GRMZM2G044150 Zea mays GRMZM2G044150 I 0.862
gene21039-v1.0-hybrid Fragaria vesca gene21039-v1.0-hybrid I 0.828
Ciclev10032929m.g Citrus clementina Ciclev10032929m.g I 0.828
MLOC_5148 Hordeum vulgare MLOC_5148 I 0.828
TRIUR3_11082 Triticum urartu TRIUR3_11082 I 0.828
GLYMA18G02780 Glycine max GLYMA18G02780 I 0.828
Lus10017431.g Linum usitatissimum Lus10017431.g I 0.828
F775_08326 Aegilops tauschii F775_08326 I 0.828
PK09808.1 Cannabis sativa PK09808.1 I 0.828
PDK_20s1728161g001 Phoenix dactylifera PDK_20s1728161g001 I 0.828
SapurV1A.0042s0120 Salix purpurea SapurV1A.0042s0120 I 0.828
Pavir.J18260 Panicum virgatum Pavir.J18260 I 0.828
Traes_5BL_CE4CF3B5C Triticum aestivum Traes_5BL_CE4CF3B5C I 0.828
MDP0000861160 Malus domestica MDP0000861160 I 0.828
orange1.1g036782m.g Citrus sinensis orange1.1g036782m.g I 0.828
Lus10007525.g Linum usitatissimum Lus10007525.g I 0.828
GSMUA_Achr8G02800_001 Musa acuminata GSMUA_Achr8G02800_001 I 0.828
Si011647m.g Setaria italica Si011647m.g I 0.828
PGSC0003DMG400023939 Solanum tuberosum PGSC0003DMG400023939 I 0.828
Si026864m.g Setaria italica Si026864m.g I 0.828
BRADI4G44850 Brachypodium distachyon BRADI4G44850 I 0.793
ORGLA02G0255200 Oryza glaberrima ORGLA02G0255200 N 0.793
GRMZM2G025989 Zea mays GRMZM2G025989 I 0.793
POPTR_0009s08060 Populus trichocarpa POPTR_0009s08060 I 0.793
Sb05g000550 Sorghum bicolor Sb05g000550 I 0.793
ORGLA11G0005800 Oryza glaberrima ORGLA11G0005800 I 0.759
Eucgr.B03991 Eucalyptus grandis Eucgr.B03991 I 0.759
OS12G0106200 Oryza sativa OS12G0106200 I 0.759
OMERI03G13500 Oryza meridionalis OMERI03G13500 N 0.759
SELMODRAFT_48883 Selaginella moellendorffii SELMODRAFT_48883 I 0.759
ORUFI11G00360 Oryza rufipogon ORUFI11G00360 N 0.759
OGLUM12G00350 Oryza glumaepatula OGLUM12G00350 I 0.759
OS11G0106900 Oryza sativa OS11G0106900 I 0.759
BGIOSGA034653 Oryza indica BGIOSGA034653 I 0.759
SELMODRAFT_58936 Selaginella moellendorffii SELMODRAFT_58936 I 0.759
ORGLA12G0001500 Oryza glaberrima ORGLA12G0001500 I 0.759
BGIOSGA036857 Oryza indica BGIOSGA036857 I 0.759
Pavir.Ib04170 Panicum virgatum Pavir.Ib04170 I 0.724
BGIOSGA016336 Oryza indica BGIOSGA016336 N 0.724
SapurV1A.0038s0110 Salix purpurea SapurV1A.0038s0110 I 0.724
chr4.CM0229.130.nc Lotus japonicus chr4.CM0229.130.nc I 0.724
Pavir.Ia01095 Panicum virgatum Pavir.Ia01095 I 0.724
SapurV1A.0023s0430 Salix purpurea SapurV1A.0023s0430 I 0.724
POPTR_0010s22470 Populus trichocarpa POPTR_0010s22470 I 0.724
OPUNC12G00430 Oryza punctata OPUNC12G00430 I 0.724
GSMUA_Achr5G29470_001 Musa acuminata GSMUA_Achr5G29470_001 I 0.724
MTR_4g083680 Medicago truncatula MTR_4g083680 I 0.724
OBART04G11480 Oryza barthii OBART04G11480 N 0.724
ONIVA04G09470 Oryza nivara ONIVA04G09470 N 0.724
Si037583m.g Setaria italica Si037583m.g I 0.724
GLYMA20G02850 Glycine max GLYMA20G02850 I 0.724
GLYMA15G41020 Glycine max GLYMA15G41020 I 0.724
GLYMA07G35000 Glycine max GLYMA07G35000 I 0.724
ORGLA04G0085000 Oryza glaberrima ORGLA04G0085000 N 0.724
Lus10031769.g Linum usitatissimum Lus10031769.g I 0.724
GLYMA08G17990 Glycine max GLYMA08G17990 I 0.724
Sb01g012810 Sorghum bicolor Sb01g012810 I 0.724
POPTR_0008s04350 Populus trichocarpa POPTR_0008s04350 I 0.724