CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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POPTR_0003s19470
(
Populus trichocarpa
)
MADF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF10545 (MADF_DNA_bdg)
IPR006578
POPTR_0003s19470
T249667_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
POPTR_0003s19470.1
MADF
63
139
LLEAYENKWILRNRAKLKGHDWEDVAHHVSSRANCTKSPKTQTQCKNKIESMKKRYRSESSTADASSWPLYPRLDLL
Links
Other
MADF
family TFs
Other
Populus trichocarpa
TFs
25 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
SapurV1A.0009s1160
Salix purpurea
SapurV1A.0009s1160
N
0.970
Pm016744
Prunus mume
Pm016744
N
0.961
SapurV1A.0574s0200
Salix purpurea
SapurV1A.0574s0200
N
0.961
POPTR_0001s06580
Populus trichocarpa
POPTR_0001s06580
N
0.961
PRUPE_ppa007968mg
Prunus persica
PRUPE_ppa007968mg
N
0.961
cassava22232.valid.m1
Manihot esculenta
cassava22232.valid.m1
N
0.955
GLYMA13G26550
Glycine max
GLYMA13G26550
N
0.952
Bostr.0697s0050
Boechera stricta
Bostr.0697s0050
N
0.951
Cagra.0562s0030
Capsella grandiflora
Cagra.0562s0030
N
0.951
Carubv10019255m.g
Capsella rubella
Carubv10019255m.g
N
0.951
Bo8g068640
Brassica oleracea
Bo8g068640
N
0.951
Bo8g083630
Brassica oleracea
Bo8g083630
N
0.951
AT3G54390
Arabidopsis thaliana
AT3G54390
N
0.951
Bra007069
Brassica rapa
Bra007069
N
0.951
fgenesh2_kg.5__1832__AT3G54390.1
Arabidopsis lyrata
fgenesh2_kg.5__1832__AT3G54390.1
N
0.951
Aquca_004_00804
Aquilegia coerulea
Aquca_004_00804
N
0.948
VIT_13s0084g00800
Vitis vinifera
VIT_13s0084g00800
N
0.948
LjSGA_030847.2
Lotus japonicus
LjSGA_030847.2
N
0.946
Solyc01g096470.2
Solanum lycopersicum
Solyc01g096470.2
N
0.946
GLYMA11G25570
Glycine max
GLYMA11G25570
N
0.941
Cla010096
Citrullus lanatus
Cla010096
N
0.937
MDP0000727700
Malus domestica
MDP0000727700
N
0.934
MDP0000123719
Malus domestica
MDP0000123719
N
0.934
GLYMA15G37451
Glycine max
GLYMA15G37451
N
0.903
Ciclev10001759m.g
Citrus clementina
Ciclev10001759m.g
N
0.903