CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Bostr.0697s0050
(
Boechera stricta
)
MADF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF10545 (MADF_DNA_bdg)
IPR006578
Bostr.0697s0050
T250581_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bostr.0697s0050.1.p
MADF
46
122
LLEAYESKWVLRNRAKLKGQDWEDVARHVSSRATNTKSPKTQTQCKNKIESMKKRYRSESATADGSSWPLYPRLDHL
Links
Other
MADF
family TFs
Other
Boechera stricta
TFs
25 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Cagra.0562s0030
Capsella grandiflora
Cagra.0562s0030
N
0.970
Carubv10019255m.g
Capsella rubella
Carubv10019255m.g
N
0.970
fgenesh2_kg.5__1832__AT3G54390.1
Arabidopsis lyrata
fgenesh2_kg.5__1832__AT3G54390.1
N
0.970
Bra007069
Brassica rapa
Bra007069
N
0.966
SapurV1A.0574s0200
Salix purpurea
SapurV1A.0574s0200
N
0.964
PRUPE_ppa007968mg
Prunus persica
PRUPE_ppa007968mg
N
0.964
POPTR_0001s06580
Populus trichocarpa
POPTR_0001s06580
N
0.964
cassava22232.valid.m1
Manihot esculenta
cassava22232.valid.m1
N
0.960
AT3G54390
Arabidopsis thaliana
AT3G54390
N
0.960
Bo8g083630
Brassica oleracea
Bo8g083630
N
0.956
GLYMA13G26550
Glycine max
GLYMA13G26550
N
0.955
Pm016744
Prunus mume
Pm016744
N
0.952
SapurV1A.0009s1160
Salix purpurea
SapurV1A.0009s1160
N
0.951
VIT_13s0084g00800
Vitis vinifera
VIT_13s0084g00800
N
0.951
POPTR_0003s19470
Populus trichocarpa
POPTR_0003s19470
N
0.951
Bo8g068640
Brassica oleracea
Bo8g068640
N
0.951
Cla010096
Citrullus lanatus
Cla010096
N
0.944
LjSGA_030847.2
Lotus japonicus
LjSGA_030847.2
N
0.944
Solyc01g096470.2
Solanum lycopersicum
Solyc01g096470.2
N
0.942
MDP0000727700
Malus domestica
MDP0000727700
N
0.938
MDP0000123719
Malus domestica
MDP0000123719
N
0.938
GLYMA11G25570
Glycine max
GLYMA11G25570
N
0.935
Aquca_004_00804
Aquilegia coerulea
Aquca_004_00804
N
0.918
Ciclev10001759m.g
Citrus clementina
Ciclev10001759m.g
N
0.916
GLYMA15G37451
Glycine max
GLYMA15G37451
N
0.909