cassava22232.valid.m1 (Manihot esculenta)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF10545 (MADF_DNA_bdg) IPR006578 cassava22232.valid.m1 T250463_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
cassava22232.valid.m1 MADF 57 133

Links

Other MADF family TFs
Other Manihot esculenta TFs

25 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
POPTR_0001s06580 Populus trichocarpa POPTR_0001s06580 N 0.967
PRUPE_ppa007968mg Prunus persica PRUPE_ppa007968mg N 0.967
SapurV1A.0574s0200 Salix purpurea SapurV1A.0574s0200 N 0.967
Bostr.0697s0050 Boechera stricta Bostr.0697s0050 N 0.960
Cagra.0562s0030 Capsella grandiflora Cagra.0562s0030 N 0.960
Carubv10019255m.g Capsella rubella Carubv10019255m.g N 0.960
Bra007069 Brassica rapa Bra007069 N 0.960
fgenesh2_kg.5__1832__AT3G54390.1 Arabidopsis lyrata fgenesh2_kg.5__1832__AT3G54390.1 N 0.960
GLYMA13G26550 Glycine max GLYMA13G26550 N 0.959
Pm016744 Prunus mume Pm016744 N 0.956
SapurV1A.0009s1160 Salix purpurea SapurV1A.0009s1160 N 0.955
VIT_13s0084g00800 Vitis vinifera VIT_13s0084g00800 N 0.955
POPTR_0003s19470 Populus trichocarpa POPTR_0003s19470 N 0.955
Cla010096 Citrullus lanatus Cla010096 N 0.948
AT3G54390 Arabidopsis thaliana AT3G54390 N 0.947
Bo8g083630 Brassica oleracea Bo8g083630 N 0.947
Bo8g068640 Brassica oleracea Bo8g068640 N 0.946
MDP0000123719 Malus domestica MDP0000123719 N 0.943
MDP0000727700 Malus domestica MDP0000727700 N 0.943
Solyc01g096470.2 Solanum lycopersicum Solyc01g096470.2 N 0.941
LjSGA_030847.2 Lotus japonicus LjSGA_030847.2 N 0.941
GLYMA11G25570 Glycine max GLYMA11G25570 N 0.936
Ciclev10001759m.g Citrus clementina Ciclev10001759m.g N 0.933
Aquca_004_00804 Aquilegia coerulea Aquca_004_00804 N 0.925
GLYMA15G37451 Glycine max GLYMA15G37451 N 0.916