chr3.CM0142.530.nd (Lotus japonicus)
MBD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01429 (MBD) IPR001739 chr3.CM0142.530.nd T261692_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
chr3.CM0142.530.nd MBD 1 59

Links

Other MBD family TFs
Other Lotus japonicus TFs

39 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GLYMA15G01040 Glycine max GLYMA15G01040 N 0.847
Ca_19192 Cicer arietinum Ca_19192 N 0.847
chr4.CM0234.40.nc Lotus japonicus chr4.CM0234.40.nc N 0.814
Ciclev10010753m.g Citrus clementina Ciclev10010753m.g N 0.810
Ca_06682 Cicer arietinum Ca_06682 N 0.797
PK04144.1 Cannabis sativa PK04144.1 N 0.780
Gorai.011G083900 Gossypium raimondii Gorai.011G083900 N 0.780
Aquca_020_00103 Aquilegia coerulea Aquca_020_00103 N 0.763
gene31058-v1.0-hybrid Fragaria vesca gene31058-v1.0-hybrid N 0.763
MDP0000152128 Malus domestica MDP0000152128 N 0.763
MDP0000574053 Malus domestica MDP0000574053 N 0.763
MDP0000301302 Malus domestica MDP0000301302 N 0.763
MDP0000248422 Malus domestica MDP0000248422 N 0.763
cassava6704.valid.m1 Manihot esculenta cassava6704.valid.m1 N 0.763
VIT_09s0002g06870 Vitis vinifera VIT_09s0002g06870 N 0.763
POPTR_0006s06690 Populus trichocarpa POPTR_0006s06690 N 0.763
GLYMA04G23980 Glycine max GLYMA04G23980 N 0.763
GLYMA06G25310 Glycine max GLYMA06G25310 N 0.763
Bo8g066360 Brassica oleracea Bo8g066360 N 0.763
Bra016665 Brassica rapa Bra016665 N 0.763
POPTR_0018s12980 Populus trichocarpa POPTR_0018s12980 N 0.759
GLYMA06G30590 Glycine max GLYMA06G30590 N 0.746
MTR_4g010210 Medicago truncatula MTR_4g010210 N 0.746
MDP0000375866 Malus domestica MDP0000375866 N 0.746
Carubv10009517m.g Capsella rubella Carubv10009517m.g N 0.746
MBD10 Arabidopsis lyrata fgenesh1_pm.C_scaffold_1001305 N 0.746
Thhalv10007967m.g Eutrema salsugineum Thhalv10007967m.g N 0.746
MBD10 Arabidopsis thaliana AT1G15340 N 0.746
Cagra.2238s0088 Capsella grandiflora Cagra.2238s0088 N 0.746
GLYMA04G23780 Glycine max GLYMA04G23780 N 0.746
Ciclev10025929m.g Citrus clementina Ciclev10025929m.g N 0.746
Gorai.006G101100 Gossypium raimondii Gorai.006G101100 N 0.729
Pm027560 Prunus mume Pm027560 N 0.729
PRUPE_ppa008789mg Prunus persica PRUPE_ppa008789mg N 0.729
Cla012920 Citrullus lanatus Cla012920 N 0.729
Cla012423 Citrullus lanatus Cla012423 N 0.712
SapurV1A.0034s0480 Salix purpurea SapurV1A.0034s0480 N 0.712
Gorai.010G062800 Gossypium raimondii Gorai.010G062800 N 0.712
MDP0000462461 Malus domestica MDP0000462461 N 0.707