OMERI12G14000 (Oryza meridionalis)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 OMERI12G14000 T276183_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK06103.1
M02348_2.00 		Cannabis sativa
TGCCCTAG
CTAGGGCA		 PBM
Weirauch et al.(2014)
pTH9649 		0.782 0.844
estExt_fgenesh1_pg.C_Chr_13.00010057
M02366_2.00 		Ostreococcus tauri
NRMCCTANN
NNTAGGKYN		 PBM
Weirauch et al.(2014)
pTH9424 		0.680 0.667
TRB1
M01070_2.00 		Arabidopsis thaliana
WRMCCTAR
YTAGGKYW		 PBM
Sullivan et al.(2014)
pTH7117 		0.671 0.822
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OMERI12G14000.2 Myb 13 63
OMERI12G14000.3 Myb 13 63

Links

Other Myb/SANT family TFs
Other Oryza meridionalis TFs

129 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ORUFI12G20880 Oryza rufipogon ORUFI12G20880 I 0.888
OB12G25520 Oryza brachyantha OB12G25520 I 0.888
OPUNC12G16890 Oryza punctata OPUNC12G16890 I 0.888
ORGLA12G0159400 Oryza glaberrima ORGLA12G0159400 I 0.888
OS12G0613300 Oryza sativa OS12G0613300 I 0.888
OGLUM12G20330 Oryza glumaepatula OGLUM12G20330 I 0.888
OBART12G18680 Oryza barthii OBART12G18680 I 0.888
BGIOSGA035841 Oryza indica BGIOSGA035841 I 0.888
ONIVA12G17630 Oryza nivara ONIVA12G17630 I 0.888
OLONG_008332 Oryza longistaminata OLONG_008332 I 0.888
Traes_5BS_EB206B8BC Triticum aestivum Traes_5BS_EB206B8BC I 0.830
BRADI4G01770 Brachypodium distachyon BRADI4G01770 I 0.830
MLOC_10278 Hordeum vulgare MLOC_10278 I 0.830
TRIUR3_10613 Triticum urartu TRIUR3_10613 I 0.830
Traes_5AS_8756ECB5A Triticum aestivum Traes_5AS_8756ECB5A I 0.830
MTR_5g015340 Medicago truncatula MTR_5g015340 I 0.821
Traes_5DS_3EE830A43 Triticum aestivum Traes_5DS_3EE830A43 I 0.819
GSMUA_Achr6G31260_001 Musa acuminata GSMUA_Achr6G31260_001 I 0.788
Cla014248 Citrullus lanatus Cla014248 I 0.782
MTR_4g097130 Medicago truncatula MTR_4g097130 I 0.782
Pm002374 Prunus mume Pm002374 I 0.782
Ca_09355 Cicer arietinum Ca_09355 I 0.782
GLYMA05G22500 Glycine max GLYMA05G22500 I 0.782
GLYMA01G40220 Glycine max GLYMA01G40220 I 0.782
MDP0000239354 Malus domestica MDP0000239354 I 0.782
Ca_02232 Cicer arietinum Ca_02232 I 0.782
GSMUA_Achr6G30000_001 Musa acuminata GSMUA_Achr6G30000_001 I 0.782
GLYMA11G05070 Glycine max GLYMA11G05070 I 0.782
Cucsa.103240 Cucumis sativus Cucsa.103240 I 0.782
LjT25P15.150.nd Lotus japonicus LjT25P15.150.nd I 0.782
GLYMA17G17370 Glycine max GLYMA17G17370 I 0.782
PRUPE_ppa009220mg Prunus persica PRUPE_ppa009220mg I 0.782
PK06103.1 Cannabis sativa PK06103.1 D 0.782
PRUPE_ppa011492mg Prunus persica PRUPE_ppa011492mg I 0.777
POPTR_0009s09020 Populus trichocarpa POPTR_0009s09020 I 0.777
Pm021139 Prunus mume Pm021139 I 0.777
Lus10014653.g Linum usitatissimum Lus10014653.g I 0.777
Lus10033775.g Linum usitatissimum Lus10033775.g I 0.777
29812.m000204 Ricinus communis 29812.m000204 I 0.777
SapurV1A.0019s0460 Salix purpurea SapurV1A.0019s0460 I 0.777
cassava19326.valid.m1 Manihot esculenta cassava19326.valid.m1 I 0.777
Eucgr.I01053 Eucalyptus grandis Eucgr.I01053 I 0.777
Eucgr.H02312 Eucalyptus grandis Eucgr.H02312 I 0.772
PDK_20s1413011g001 Phoenix dactylifera PDK_20s1413011g001 I 0.771
PDK_20s1467521g002 Phoenix dactylifera PDK_20s1467521g002 I 0.770
gene25445-v1.0-hybrid Fragaria vesca gene25445-v1.0-hybrid I 0.770
POPTR_0001s30000 Populus trichocarpa POPTR_0001s30000 I 0.770
SapurV1A.0005s0260 Salix purpurea SapurV1A.0005s0260 I 0.770
Ca_02722 Cicer arietinum Ca_02722 I 0.761
VIT_00s1311g00020 Vitis vinifera VIT_00s1311g00020 I 0.755
VIT_07s0151g00480 Vitis vinifera VIT_07s0151g00480 I 0.755
MDP0000234807 Malus domestica MDP0000234807 I 0.748
SELMODRAFT_49312 Selaginella moellendorffii SELMODRAFT_49312 I 0.744
SELMODRAFT_443975 Selaginella moellendorffii SELMODRAFT_443975 I 0.744
Cla006547 Citrullus lanatus Cla006547 I 0.743
PK19870.1 Cannabis sativa PK19870.1 I 0.743
Ciclev10028926m.g Citrus clementina Ciclev10028926m.g I 0.743
Gorai.005G230800 Gossypium raimondii Gorai.005G230800 I 0.743
orange1.1g022048m.g Citrus sinensis orange1.1g022048m.g I 0.743
TRB1 Vitis vinifera VIT_03s0091g01030 I 0.743
Cucsa.298390 Cucumis sativus Cucsa.298390 I 0.743
TCM_007242 Theobroma cacao TCM_007242 I 0.743
Thhalv10012087m.g Eutrema salsugineum Thhalv10012087m.g I 0.741
gene05764-v1.0-hybrid Fragaria vesca gene05764-v1.0-hybrid I 0.738
MTR_1g041765 Medicago truncatula MTR_1g041765 I 0.736
SapurV1A.0235s0100 Salix purpurea SapurV1A.0235s0100 I 0.732
SapurV1A.1368s0050 Salix purpurea SapurV1A.1368s0050 I 0.732
POPTR_0014s01010 Populus trichocarpa POPTR_0014s01010 I 0.732
MTR_2g099610 Medicago truncatula MTR_2g099610 I 0.730
LjSGA_016825.2 Lotus japonicus LjSGA_016825.2 I 0.730
chr3.LjT02L14.30.nd Lotus japonicus chr3.LjT02L14.30.nd I 0.730
EuGene.0500010080 Micromonas sp RCC299 EuGene.0500010080 I 0.726
AMTR_s00036p00166880 Amborella trichopoda AMTR_s00036p00166880 I 0.726
Thhalv10018950m.g Eutrema salsugineum Thhalv10018950m.g I 0.723
chr2.LjT13P17.300.nd Lotus japonicus chr2.LjT13P17.300.nd I 0.722
LjSGA_029815.1 Lotus japonicus LjSGA_029815.1 I 0.722
GSMUA_Achr8G24960_001 Musa acuminata GSMUA_Achr8G24960_001 I 0.720
GSMUA_Achr4G08670_001 Musa acuminata GSMUA_Achr4G08670_001 I 0.720
GSMUA_Achr4G09130_001 Musa acuminata GSMUA_Achr4G09130_001 I 0.720
SELMODRAFT_426759 Selaginella moellendorffii SELMODRAFT_426759 I 0.719
SELMODRAFT_413266 Selaginella moellendorffii SELMODRAFT_413266 I 0.719
Aquca_060_00026 Aquilegia coerulea Aquca_060_00026 I 0.717
Ca_10058 Cicer arietinum Ca_10058 I 0.716
Bo5g077530 Brassica oleracea Bo5g077530 I 0.705
Bra039650 Brassica rapa Bra039650 I 0.705
Lus10025203.g Linum usitatissimum Lus10025203.g I 0.702
Lus10012092.g Linum usitatissimum Lus10012092.g I 0.702
Eucgr.J02841 Eucalyptus grandis Eucgr.J02841 I 0.697
orange1.1g020653m.g Citrus sinensis orange1.1g020653m.g I 0.693
TCM_000807 Theobroma cacao TCM_000807 I 0.693
Gorai.007G224200 Gossypium raimondii Gorai.007G224200 I 0.693
Gorai.003G030800 Gossypium raimondii Gorai.003G030800 I 0.693
Lus10019260.g Linum usitatissimum Lus10019260.g I 0.693
Ciclev10026089m.g Citrus clementina Ciclev10026089m.g I 0.693
29661.m000926 Ricinus communis 29661.m000926 I 0.693
cassava7508.valid.m1 Manihot esculenta cassava7508.valid.m1 I 0.693
Lus10011546.g Linum usitatissimum Lus10011546.g I 0.693
PDK_20s1888511g002 Phoenix dactylifera PDK_20s1888511g002 I 0.686
gene07496-v1.0-hybrid Fragaria vesca gene07496-v1.0-hybrid I 0.682
GLYMA09G03390 Glycine max GLYMA09G03390 I 0.681
GLYMA15G14320 Glycine max GLYMA15G14320 I 0.681
estExt_fgenesh1_pg.C_Chr_13.00010057 Ostreococcus tauri estExt_fgenesh1_pg.C_Chr_13.00010057 D 0.680
BRADI2G47820 Brachypodium distachyon BRADI2G47820 I 0.679
Pavir.Ea02570 Panicum virgatum Pavir.Ea02570 I 0.679
Pavir.Eb02802 Panicum virgatum Pavir.Eb02802 I 0.679
GRMZM2G108424 Zea mays GRMZM2G108424 I 0.679
Si002467m.g Setaria italica Si002467m.g I 0.679
Sb03g032530 Sorghum bicolor Sb03g032530 I 0.679
TRAES3BF075800120CFD_g Triticum aestivum TRAES3BF075800120CFD_g I 0.679
Traes_3AL_12B53AB09 Triticum aestivum Traes_3AL_12B53AB09 I 0.679
LPERR01G24270 Leersia perrieri LPERR01G24270 I 0.679
GRMZM2G023667 Zea mays GRMZM2G023667 I 0.679
Solyc07g040920.2 Solanum lycopersicum Solyc07g040920.2 I 0.677
PGSC0003DMG400023131 Solanum tuberosum PGSC0003DMG400023131 I 0.675
Solyc11g044320.1 Solanum lycopersicum Solyc11g044320.1 I 0.675
mgf010975m Mimulus guttatus mgf010975m I 0.675
mgf000125m Mimulus guttatus mgf000125m I 0.675
Cagra.2826s0004 Capsella grandiflora Cagra.2826s0004 I 0.671
Bo6g018740 Brassica oleracea Bo6g018740 I 0.671
Carubv10009836m.g Capsella rubella Carubv10009836m.g I 0.671
Bostr.26675s0174 Boechera stricta Bostr.26675s0174 I 0.671
TRB1 Arabidopsis lyrata fgenesh2_kg.1__4077__AT1G49950.2 I 0.671
Thhalv10011686m.g Eutrema salsugineum Thhalv10011686m.g I 0.671
TRB1 Arabidopsis thaliana AT1G49950 D 0.671
Bra018818 Brassica rapa Bra018818 I 0.671
MTR_2g031870 Medicago truncatula MTR_2g031870 I 0.664
gw1.1.287.1 Physcomitrella patens gw1.1.287.1 I 0.662
gw1.176.27.1 Physcomitrella patens gw1.176.27.1 I 0.662