CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Sb05g027360
(
Sorghum bicolor
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
IPR014778
Sb05g027360
T279238_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
MYB59
M00883_2.00
Arabidopsis thaliana
NKACCTAAYN
NRTTAGGTMN
PBM
Franco-Zorrilla et al.(2014)
MYB59
0.711
0.733
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Sb05g027360.1
Myb
10
57
KGPWTEEEDMQLVCTVRLLGDRRWDSIAQVSGLNRSGKSCRMRWVNYL
Sb05g027360.1
Myb
63
105
HGRLSQQEERLVIELHSRWGNRIARRLPGRTDNDIKNYWKTRM
Links
Other
Myb/SANT
family TFs
Other
Sorghum bicolor
TFs
102 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Si026803m.g
Setaria italica
Si026803m.g
I
0.834
Pavir.Hb00058
Panicum virgatum
Pavir.Hb00058
I
0.834
ORGLA11G0187400
Oryza glaberrima
ORGLA11G0187400
I
0.812
Traes_4BS_61B30E3E4
Triticum aestivum
Traes_4BS_61B30E3E4
I
0.812
F775_28589
Aegilops tauschii
F775_28589
I
0.812
ORUFI11G25190
Oryza rufipogon
ORUFI11G25190
I
0.812
MYBAS1
Oryza sativa
OS11G0700500
I
0.812
MLOC_78504
Hordeum vulgare
MLOC_78504
I
0.812
TRIUR3_16687
Triticum urartu
TRIUR3_16687
I
0.812
Traes_4DS_0ECE7A421
Triticum aestivum
Traes_4DS_0ECE7A421
I
0.812
BGIOSGA033532
Oryza indica
BGIOSGA033532
I
0.812
Traes_4AL_8B52D54FD
Triticum aestivum
Traes_4AL_8B52D54FD
I
0.804
Pavir.J08441
Panicum virgatum
Pavir.J08441
I
0.804
GRMZM2G048136
Zea mays
GRMZM2G048136
I
0.793
Pavir.J11826
Panicum virgatum
Pavir.J11826
I
0.792
GSMUA_Achr2G16200_001
Musa acuminata
GSMUA_Achr2G16200_001
I
0.785
Pavir.J33560
Panicum virgatum
Pavir.J33560
I
0.774
OB11G27690
Oryza brachyantha
OB11G27690
I
0.767
GSMUA_Achr9G28370_001
Musa acuminata
GSMUA_Achr9G28370_001
I
0.767
OB12G23080
Oryza brachyantha
OB12G23080
I
0.762
LPERR12G13390
Leersia perrieri
LPERR12G13390
I
0.762
MLOC_52439
Hordeum vulgare
MLOC_52439
I
0.762
Si023104m.g
Setaria italica
Si023104m.g
I
0.762
Pavir.Ca02588
Panicum virgatum
Pavir.Ca02588
I
0.762
Pavir.J11500
Panicum virgatum
Pavir.J11500
I
0.762
TRIUR3_16862
Triticum urartu
TRIUR3_16862
I
0.762
Sb08g018580
Sorghum bicolor
Sb08g018580
I
0.762
ORGLA12G0206100
Oryza glaberrima
ORGLA12G0206100
I
0.762
ORUFI12G17930
Oryza rufipogon
ORUFI12G17930
I
0.762
ORGLA12G0141600
Oryza glaberrima
ORGLA12G0141600
I
0.762
MYBAS2
Oryza sativa
OS12G0567300
I
0.762
GRMZM2G047626
Zea mays
GRMZM2G047626
I
0.762
F775_06315
Aegilops tauschii
F775_06315
I
0.762
BGIOSGA035986
Oryza indica
BGIOSGA035986
I
0.762
GRMZM2G130149
Zea mays
GRMZM2G130149
I
0.762
BRADI4G04050
Brachypodium distachyon
BRADI4G04050
I
0.762
GSMUA_Achr10G26730_001
Musa acuminata
GSMUA_Achr10G26730_001
I
0.747
Pavir.Gb02200
Panicum virgatum
Pavir.Gb02200
I
0.744
MDP0000177010
Malus domestica
MDP0000177010
I
0.735
VIT_06s0004g04140
Vitis vinifera
VIT_06s0004g04140
I
0.735
Cla013488
Citrullus lanatus
Cla013488
I
0.732
Cucsa.379880
Cucumis sativus
Cucsa.379880
I
0.732
MDP0000143156
Malus domestica
MDP0000143156
I
0.730
mgf020363m
Mimulus guttatus
mgf020363m
I
0.730
mgf025691m
Mimulus guttatus
mgf025691m
I
0.730
POPTR_0009s03240
Populus trichocarpa
POPTR_0009s03240
I
0.728
SapurV1A.0489s0220
Salix purpurea
SapurV1A.0489s0220
I
0.728
Cucsa.213500
Cucumis sativus
Cucsa.213500
I
0.728
Cla008413
Citrullus lanatus
Cla008413
I
0.728
SapurV1A.0040s0010
Salix purpurea
SapurV1A.0040s0010
I
0.728
PGSC0003DMG400015536
Solanum tuberosum
PGSC0003DMG400015536
I
0.722
Solyc11g073120.1
Solanum lycopersicum
Solyc11g073120.1
I
0.722
GSMUA_Achr8G02640_001
Musa acuminata
GSMUA_Achr8G02640_001
I
0.720
GSMUA_Achr10G03710_001
Musa acuminata
GSMUA_Achr10G03710_001
I
0.719
Gorai.013G265300
Gossypium raimondii
Gorai.013G265300
I
0.718
GSMUA_Achr7G18200_001
Musa acuminata
GSMUA_Achr7G18200_001
I
0.715
GLYMA13G40830
Glycine max
GLYMA13G40830
I
0.711
Thhalv10014524m.g
Eutrema salsugineum
Thhalv10014524m.g
I
0.711
Carubv10017875m.g
Capsella rubella
Carubv10017875m.g
I
0.711
GLYMA15G04620
Glycine max
GLYMA15G04620
I
0.711
evm.TU.supercontig_190.35
Carica papaya
evm.TU.supercontig_190.35
I
0.711
Thhalv10002648m.g
Eutrema salsugineum
Thhalv10002648m.g
I
0.711
Pm000809
Prunus mume
Pm000809
I
0.711
MYB59
Arabidopsis thaliana
AT5G59780
D
0.711
Bra018223
Brassica rapa
Bra018223
I
0.711
ATMYB48
Arabidopsis thaliana
AT3G46130
I
0.711
Gorai.003G136400
Gossypium raimondii
Gorai.003G136400
I
0.711
ATMYB48-1
Arabidopsis lyrata
fgenesh1_pg.C_scaffold_5001097
I
0.711
PRUPE_ppa015954mg
Prunus persica
PRUPE_ppa015954mg
I
0.711
Bo3g130340
Brassica oleracea
Bo3g130340
I
0.711
TCM_041904
Theobroma cacao
TCM_041904
I
0.711
MYB59
Arabidopsis lyrata
fgenesh2_kg.8__1928__AT5G59780.3
I
0.711
orange1.1g023677m.g
Citrus sinensis
orange1.1g023677m.g
I
0.711
GSMUA_Achr5G28350_001
Musa acuminata
GSMUA_Achr5G28350_001
I
0.708
POPTR_0001s24220
Populus trichocarpa
POPTR_0001s24220
I
0.708
Gorai.001G107900
Gossypium raimondii
Gorai.001G107900
I
0.708
GSMUA_Achr6G15370_001
Musa acuminata
GSMUA_Achr6G15370_001
I
0.707
GSMUA_Achr10G13520_001
Musa acuminata
GSMUA_Achr10G13520_001
I
0.706
MTR_4g063100
Medicago truncatula
MTR_4g063100
I
0.703
Lus10005886.g
Linum usitatissimum
Lus10005886.g
I
0.702
SapurV1A.0008s0940
Salix purpurea
SapurV1A.0008s0940
I
0.701
SapurV1A.0008s0950
Salix purpurea
SapurV1A.0008s0950
I
0.701
Ca_02593
Cicer arietinum
Ca_02593
I
0.700
MTR_2g096380
Medicago truncatula
MTR_2g096380
I
0.700
Traes_3AL_A8AF980F3
Triticum aestivum
Traes_3AL_A8AF980F3
I
0.699
F775_29427
Aegilops tauschii
F775_29427
I
0.699
cassava13589.valid.m1
Manihot esculenta
cassava13589.valid.m1
I
0.699
TRAES3BF065400010CFD_g
Triticum aestivum
TRAES3BF065400010CFD_g
I
0.699
TRIUR3_22432
Triticum urartu
TRIUR3_22432
I
0.699
29788.m000340
Ricinus communis
29788.m000340
I
0.699
Solyc06g005330.2
Solanum lycopersicum
Solyc06g005330.2
I
0.698
AMTR_s00145p00098450
Amborella trichopoda
AMTR_s00145p00098450
I
0.698
OB01G54920
Oryza brachyantha
OB01G54920
I
0.686
Bra020289
Brassica rapa
Bra020289
I
0.681
Bo2g025410
Brassica oleracea
Bo2g025410
I
0.681
BRADI2G62510
Brachypodium distachyon
BRADI2G62510
I
0.677
Bra002533
Brassica rapa
Bra002533
I
0.677
Bo9g140750
Brassica oleracea
Bo9g140750
I
0.677
GSMUA_Achr11G24690_001
Musa acuminata
GSMUA_Achr11G24690_001
I
0.676
Bra006694
Brassica rapa
Bra006694
I
0.672
GLYMA11G15180
Glycine max
GLYMA11G15180
I
0.670
GLYMA12G07110
Glycine max
GLYMA12G07110
I
0.661