Gorai.001G115300 (Gossypium raimondii)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Gorai.001G115300 T287464_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.001G115300.1 Myb 154 200
Gorai.001G115300.1 Myb 206 251

Links

Other Myb/SANT family TFs
Other Gossypium raimondii TFs

106 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Gorai.011G044100 Gossypium raimondii Gorai.011G044100 N 0.909
TCM_041651 Theobroma cacao TCM_041651 N 0.872
29681.m001315 Ricinus communis 29681.m001315 N 0.851
cassava26674.m1 Manihot esculenta cassava26674.m1 N 0.851
Pm000541 Prunus mume Pm000541 I 0.849
PRUPE_ppa018123mg Prunus persica PRUPE_ppa018123mg I 0.849
POPTR_0001s25710 Populus trichocarpa POPTR_0001s25710 N 0.847
MDP0000319656 Malus domestica MDP0000319656 I 0.846
POPTR_0009s04870 Populus trichocarpa POPTR_0009s04870 N 0.837
GLYMA18G07360 Glycine max GLYMA18G07360 N 0.837
SapurV1A.0772s0150 Salix purpurea SapurV1A.0772s0150 N 0.827
cassava26507.m1 Manihot esculenta cassava26507.m1 N 0.822
evm.TU.supercontig_112.44 Carica papaya evm.TU.supercontig_112.44 N 0.815
chr4.CM0042.120.nd Lotus japonicus chr4.CM0042.120.nd N 0.813
Ciclev10030254m.g Citrus clementina Ciclev10030254m.g N 0.808
orange1.1g046581m.g Citrus sinensis orange1.1g046581m.g N 0.808
gene08006-v1.0-hybrid Fragaria vesca gene08006-v1.0-hybrid I 0.804
Cla008304 Citrullus lanatus Cla008304 N 0.800
Cucsa.146980 Cucumis sativus Cucsa.146980 N 0.797
SapurV1A.0041s0840 Salix purpurea SapurV1A.0041s0840 N 0.793
Lus10018220.g Linum usitatissimum Lus10018220.g N 0.787
MTR_3g463400 Medicago truncatula MTR_3g463400 N 0.786
Lus10040684.g Linum usitatissimum Lus10040684.g N 0.783
MTR_5g070020 Medicago truncatula MTR_5g070020 N 0.775
Aquca_045_00020 Aquilegia coerulea Aquca_045_00020 I 0.759
PDK_20s1782461g001 Phoenix dactylifera PDK_20s1782461g001 N 0.758
GSMUA_Achr10G00770_001 Musa acuminata GSMUA_Achr10G00770_001 N 0.757
PGSC0003DMG400044141 Solanum tuberosum PGSC0003DMG400044141 N 0.747
Solyc06g076840.1 Solanum lycopersicum Solyc06g076840.1 N 0.747
gene32198-v1.0-hybrid Fragaria vesca gene32198-v1.0-hybrid I 0.731
PRUPE_ppa026791mg Prunus persica PRUPE_ppa026791mg I 0.731
Pm024743 Prunus mume Pm024743 I 0.731
MYB98 Vitis vinifera VIT_17s0000g08550 I 0.731
GLYMA05G02300 Glycine max GLYMA05G02300 I 0.731
cassava19706.m1 Manihot esculenta cassava19706.m1 I 0.728
Thhalv10015404m.g Eutrema salsugineum Thhalv10015404m.g N 0.728
Thhalv10027294m.g Eutrema salsugineum Thhalv10027294m.g N 0.728
cassava9008.m1 Manihot esculenta cassava9008.m1 I 0.723
GSMUA_Achr6G33700_001 Musa acuminata GSMUA_Achr6G33700_001 N 0.723
POPTR_0012s08360 Populus trichocarpa POPTR_0012s08360 I 0.722
Cucsa.196850 Cucumis sativus Cucsa.196850 I 0.716
AMTR_s00096p00076220 Amborella trichopoda AMTR_s00096p00076220 I 0.715
GLYMA02G39070 Glycine max GLYMA02G39070 N 0.715
Cla019490 Citrullus lanatus Cla019490 I 0.713
Solyc06g071520.1 Solanum lycopersicum Solyc06g071520.1 I 0.710
GSMUA_Achr8G02290_001 Musa acuminata GSMUA_Achr8G02290_001 N 0.707
Gorai.008G295800 Gossypium raimondii Gorai.008G295800 I 0.707
MDP0000215359 Malus domestica MDP0000215359 I 0.707
Bostr.20821s0001 Boechera stricta Bostr.20821s0001 N 0.707
TCM_012087 Theobroma cacao TCM_012087 I 0.707
GLYMA14G37140 Glycine max GLYMA14G37140 N 0.705
Bo3g018490 Brassica oleracea Bo3g018490 I 0.704
Bra006744 Brassica rapa Bra006744 I 0.704
Bo2g028290 Brassica oleracea Bo2g028290 I 0.700
MYB64 Arabidopsis thaliana AT5G11050 N 0.700
POPTR_0015s08880 Populus trichocarpa POPTR_0015s08880 I 0.697
SapurV1A.2163s0040 Salix purpurea SapurV1A.2163s0040 I 0.697
Cagra.1398s0045 Capsella grandiflora Cagra.1398s0045 N 0.696
Carubv10003695m.g Capsella rubella Carubv10003695m.g N 0.696
Bra020346 Brassica rapa Bra020346 I 0.695
evm.TU.supercontig_76.38 Carica papaya evm.TU.supercontig_76.38 I 0.693
Thhalv10016057m.g Eutrema salsugineum Thhalv10016057m.g I 0.693
MYB64 Arabidopsis lyrata fgenesh2_kg.6__1071__AT5G11050.1 N 0.691
Eucgr.B00301 Eucalyptus grandis Eucgr.B00301 I 0.686
mgf024290m Mimulus guttatus mgf024290m I 0.684
Lus10005864.g Linum usitatissimum Lus10005864.g I 0.683
SapurV1A.0571s0110 Salix purpurea SapurV1A.0571s0110 I 0.683
MDP0000199939 Malus domestica MDP0000199939 I 0.683
Pavir.J02718 Panicum virgatum Pavir.J02718 I 0.683
Pavir.J02497 Panicum virgatum Pavir.J02497 I 0.683
Carubv10028458m.g Capsella rubella Carubv10028458m.g I 0.674
fgenesh2_kg.3__2684__AT5G58850.1 Arabidopsis lyrata fgenesh2_kg.3__2684__AT5G58850.1 I 0.674
GLYMA16G07927 Glycine max GLYMA16G07927 I 0.674
fgenesh2_kg.277__1__AT5G58850.1 Arabidopsis lyrata fgenesh2_kg.277__1__AT5G58850.1 I 0.674
LjSGA_147332.1 Lotus japonicus LjSGA_147332.1 N 0.674
Cagra.0891s0081 Capsella grandiflora Cagra.0891s0081 I 0.674
GLYMA19G13923 Glycine max GLYMA19G13923 I 0.674
Eucgr.J01929 Eucalyptus grandis Eucgr.J01929 N 0.673
GLYMA05G08761 Glycine max GLYMA05G08761 N 0.672
mg025334m Mimulus guttatus mg025334m I 0.672
Ca_17294 Cicer arietinum Ca_17294 I 0.669
Bostr.23997s0007 Boechera stricta Bostr.23997s0007 N 0.668
Sb01g005100 Sorghum bicolor Sb01g005100 I 0.666
mgf023372m Mimulus guttatus mgf023372m I 0.666
PGSC0003DMG400036895 Solanum tuberosum PGSC0003DMG400036895 I 0.665
MTR_4g105660 Medicago truncatula MTR_4g105660 N 0.665
Traes_7BS_D28CCE3B8 Triticum aestivum Traes_7BS_D28CCE3B8 I 0.662
ORUFI06G04170 Oryza rufipogon ORUFI06G04170 I 0.662
OS06G0162700 Oryza sativa OS06G0162700 I 0.662
OB06G13860 Oryza brachyantha OB06G13860 I 0.662
TRIUR3_12421 Triticum urartu TRIUR3_12421 I 0.662
orange1.1g046859m.g Citrus sinensis orange1.1g046859m.g I 0.662
BGIOSGA022369 Oryza indica BGIOSGA022369 I 0.662
OPUNC06G03990 Oryza punctata OPUNC06G03990 I 0.662
Traes_7AS_A337F362A Triticum aestivum Traes_7AS_A337F362A I 0.662
Ciclev10024427m.g Citrus clementina Ciclev10024427m.g I 0.662
ORGLA06G0038500 Oryza glaberrima ORGLA06G0038500 I 0.662
OLONG_010000 Oryza longistaminata OLONG_010000 I 0.662
OMERI06G04840 Oryza meridionalis OMERI06G04840 I 0.662
OGLUM06G04280 Oryza glumaepatula OGLUM06G04280 I 0.662
OBART06G04170 Oryza barthii OBART06G04170 I 0.662
LPERR06G03780 Leersia perrieri LPERR06G03780 I 0.662
ONIVA06G05390 Oryza nivara ONIVA06G05390 I 0.662
F775_22212 Aegilops tauschii F775_22212 I 0.662
Gorai.001G263600 Gossypium raimondii Gorai.001G263600 I 0.661
GRMZM5G870592 Zea mays GRMZM5G870592 I 0.661