CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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AMTR_s00096p00076220
(
Amborella trichopoda
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
IPR014778
AMTR_s00096p00076220
T266244_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
MYB118
M07087_2.00
Arabidopsis thaliana
DHWDHRDMCGTTACDWW
WWHGTAACGKHYDHWDH
Dap-seq
OMalley et al.(2016)
MYB118_col_a
0.685
0.785
MYB118
M07088_2.00
Arabidopsis thaliana
DWWWYGTAACGKHYR
YRDMCGTTACRWWWH
Dap-seq
OMalley et al.(2016)
MYB118_colamp_a
0.685
0.785
MYB98
M02301_2.00
Arabidopsis thaliana
NNGTAACGKMN
NKMCGTTACNN
PBM
Weirauch et al.(2014)
pTH8148
0.672
0.753
MYB98
M07108_2.00
Arabidopsis thaliana
DWWWHGTAACGKWHD
HDWMCGTTACDWWWH
Dap-seq
OMalley et al.(2016)
MYB98_col_a
0.672
0.753
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ERN02363
Myb
178
224
KGQWTLEEDRLLIHLVDQYGVRKWSQIAKMFKGRVGKQCRERWHNHL
ERN02363
Myb
230
275
KDTWTEEEEKLLVQAHLEIGNKWAEIARRLPGRTENAIKNHWNATK
Links
Other
Myb/SANT
family TFs
Other
Amborella trichopoda
TFs
136 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
TCM_012087
Theobroma cacao
TCM_012087
I
0.811
MDP0000215359
Malus domestica
MDP0000215359
I
0.811
PRUPE_ppa026791mg
Prunus persica
PRUPE_ppa026791mg
I
0.811
Pm024743
Prunus mume
Pm024743
I
0.811
Cucsa.196850
Cucumis sativus
Cucsa.196850
I
0.802
Cla019490
Citrullus lanatus
Cla019490
I
0.799
MYB98
Vitis vinifera
VIT_17s0000g08550
I
0.795
GLYMA05G02300
Glycine max
GLYMA05G02300
I
0.793
cassava19706.m1
Manihot esculenta
cassava19706.m1
I
0.792
Gorai.008G295800
Gossypium raimondii
Gorai.008G295800
I
0.786
evm.TU.supercontig_76.38
Carica papaya
evm.TU.supercontig_76.38
I
0.782
Solyc06g071520.1
Solanum lycopersicum
Solyc06g071520.1
I
0.776
gene32198-v1.0-hybrid
Fragaria vesca
gene32198-v1.0-hybrid
I
0.771
Eucgr.B00301
Eucalyptus grandis
Eucgr.B00301
I
0.766
SapurV1A.2163s0040
Salix purpurea
SapurV1A.2163s0040
I
0.762
Pm000541
Prunus mume
Pm000541
I
0.757
PRUPE_ppa018123mg
Prunus persica
PRUPE_ppa018123mg
I
0.757
MDP0000319656
Malus domestica
MDP0000319656
I
0.754
Ciclev10024427m.g
Citrus clementina
Ciclev10024427m.g
I
0.751
orange1.1g046859m.g
Citrus sinensis
orange1.1g046859m.g
I
0.751
cassava33974.m1
Manihot esculenta
cassava33974.m1
I
0.748
30147.m013937
Ricinus communis
30147.m013937
I
0.748
POPTR_0015s08880
Populus trichocarpa
POPTR_0015s08880
I
0.746
Solyc06g076840.1
Solanum lycopersicum
Solyc06g076840.1
N
0.744
PGSC0003DMG400044141
Solanum tuberosum
PGSC0003DMG400044141
N
0.744
PDK_20s1782461g001
Phoenix dactylifera
PDK_20s1782461g001
N
0.741
cassava9008.m1
Manihot esculenta
cassava9008.m1
I
0.740
POPTR_0012s08360
Populus trichocarpa
POPTR_0012s08360
I
0.736
Lus10042111.g
Linum usitatissimum
Lus10042111.g
I
0.734
GSMUA_Achr3G19490_001
Musa acuminata
GSMUA_Achr3G19490_001
I
0.732
MYB118
Populus trichocarpa
POPTR_0001s35140
I
0.732
PGSC0003DMG400036895
Solanum tuberosum
PGSC0003DMG400036895
I
0.731
TRIUR3_12421
Triticum urartu
TRIUR3_12421
I
0.727
Traes_7AS_A337F362A
Triticum aestivum
Traes_7AS_A337F362A
I
0.727
Traes_7BS_D28CCE3B8
Triticum aestivum
Traes_7BS_D28CCE3B8
I
0.727
F775_22212
Aegilops tauschii
F775_22212
I
0.727
GLYMA06G19280
Glycine max
GLYMA06G19280
I
0.726
Ca_17294
Cicer arietinum
Ca_17294
I
0.725
MTR_5g049190
Medicago truncatula
MTR_5g049190
I
0.723
gene08006-v1.0-hybrid
Fragaria vesca
gene08006-v1.0-hybrid
I
0.721
MTR_4g105660
Medicago truncatula
MTR_4g105660
N
0.720
GSMUA_Achr10G00770_001
Musa acuminata
GSMUA_Achr10G00770_001
N
0.720
TCM_041651
Theobroma cacao
TCM_041651
N
0.718
OB06G13860
Oryza brachyantha
OB06G13860
I
0.718
29681.m001315
Ricinus communis
29681.m001315
N
0.718
POPTR_0009s04870
Populus trichocarpa
POPTR_0009s04870
N
0.718
cassava26674.m1
Manihot esculenta
cassava26674.m1
N
0.718
Pavir.J02497
Panicum virgatum
Pavir.J02497
I
0.715
Pavir.J02718
Panicum virgatum
Pavir.J02718
I
0.715
Gorai.011G044100
Gossypium raimondii
Gorai.011G044100
N
0.715
Gorai.001G115300
Gossypium raimondii
Gorai.001G115300
N
0.715
POPTR_0001s25710
Populus trichocarpa
POPTR_0001s25710
N
0.714
Lus10002384.g
Linum usitatissimum
Lus10002384.g
I
0.713
LPERR06G03780
Leersia perrieri
LPERR06G03780
I
0.710
OMERI06G04840
Oryza meridionalis
OMERI06G04840
I
0.709
OPUNC06G03990
Oryza punctata
OPUNC06G03990
I
0.709
ONIVA06G05390
Oryza nivara
ONIVA06G05390
I
0.709
OBART06G04170
Oryza barthii
OBART06G04170
I
0.709
OS06G0162700
Oryza sativa
OS06G0162700
I
0.709
ORUFI06G04170
Oryza rufipogon
ORUFI06G04170
I
0.709
ORGLA06G0038500
Oryza glaberrima
ORGLA06G0038500
I
0.709
chr4.CM0042.120.nd
Lotus japonicus
chr4.CM0042.120.nd
N
0.709
OGLUM06G04280
Oryza glumaepatula
OGLUM06G04280
I
0.709
BGIOSGA022369
Oryza indica
BGIOSGA022369
I
0.709
OLONG_010000
Oryza longistaminata
OLONG_010000
I
0.709
mgf024290m
Mimulus guttatus
mgf024290m
I
0.708
Lus10027695.g
Linum usitatissimum
Lus10027695.g
I
0.708
cassava26507.m1
Manihot esculenta
cassava26507.m1
N
0.707
evm.TU.supercontig_112.44
Carica papaya
evm.TU.supercontig_112.44
N
0.707
MTR_3g463400
Medicago truncatula
MTR_3g463400
N
0.706
mg025334m
Mimulus guttatus
mg025334m
I
0.705
GSMUA_Achr6G33700_001
Musa acuminata
GSMUA_Achr6G33700_001
N
0.704
Aquca_045_00020
Aquilegia coerulea
Aquca_045_00020
I
0.704
GLYMA18G07360
Glycine max
GLYMA18G07360
N
0.700
MTR_3g077650
Medicago truncatula
MTR_3g077650
I
0.700
Pavir.J25000
Panicum virgatum
Pavir.J25000
I
0.700
SapurV1A.0571s0110
Salix purpurea
SapurV1A.0571s0110
I
0.699
SapurV1A.0772s0150
Salix purpurea
SapurV1A.0772s0150
N
0.698
Si039046m.g
Setaria italica
Si039046m.g
I
0.698
Traes_1BL_4D9406708
Triticum aestivum
Traes_1BL_4D9406708
I
0.697
Bra025299
Brassica rapa
Bra025299
I
0.696
Cla008304
Citrullus lanatus
Cla008304
N
0.696
Traes_1DL_918A8F357
Triticum aestivum
Traes_1DL_918A8F357
I
0.696
Thhalv10005564m.g
Eutrema salsugineum
Thhalv10005564m.g
I
0.694
Cucsa.146980
Cucumis sativus
Cucsa.146980
N
0.693
orange1.1g046581m.g
Citrus sinensis
orange1.1g046581m.g
N
0.693
Ciclev10030254m.g
Citrus clementina
Ciclev10030254m.g
N
0.693
29917.m001977
Ricinus communis
29917.m001977
I
0.690
Sb01g005100
Sorghum bicolor
Sb01g005100
I
0.689
POPTR_0005s12050
Populus trichocarpa
POPTR_0005s12050
I
0.689
Ca_17087
Cicer arietinum
Ca_17087
I
0.688
Cla010586
Citrullus lanatus
Cla010586
I
0.688
mgf023372m
Mimulus guttatus
mgf023372m
I
0.687
MYB118
Arabidopsis thaliana
AT3G27785
D
0.685
Carubv10018693m.g
Capsella rubella
Carubv10018693m.g
I
0.685
MYB118
Arabidopsis lyrata
fgenesh2_kg.5__560__AT3G27785.1
I
0.685
Cagra.11216s0002
Capsella grandiflora
Cagra.11216s0002
I
0.685
Bostr.0556s0457
Boechera stricta
Bostr.0556s0457
I
0.685
PRUPE_ppa019507mg
Prunus persica
PRUPE_ppa019507mg
I
0.685
SapurV1A.0396s0170
Salix purpurea
SapurV1A.0396s0170
I
0.685
GRMZM5G870592
Zea mays
GRMZM5G870592
I
0.684
TCM_016909
Theobroma cacao
TCM_016909
I
0.682
Ca_07482
Cicer arietinum
Ca_07482
I
0.682
Gorai.001G263600
Gossypium raimondii
Gorai.001G263600
I
0.682
Traes_7DS_E27ECBC6E
Triticum aestivum
Traes_7DS_E27ECBC6E
I
0.681
GSMUA_Achr6G06490_001
Musa acuminata
GSMUA_Achr6G06490_001
I
0.680
Lus10039966.g
Linum usitatissimum
Lus10039966.g
I
0.678
Pavir.J37434
Panicum virgatum
Pavir.J37434
I
0.678
Thhalv10026824m.g
Eutrema salsugineum
Thhalv10026824m.g
I
0.678
Pm015681
Prunus mume
Pm015681
I
0.676
Lus10018220.g
Linum usitatissimum
Lus10018220.g
N
0.673
Cagra.4306s0015
Capsella grandiflora
Cagra.4306s0015
I
0.672
Bo1g019910
Brassica oleracea
Bo1g019910
I
0.672
Bostr.30275s0352
Boechera stricta
Bostr.30275s0352
I
0.672
Bra013346
Brassica rapa
Bra013346
I
0.672
Carubv10006734m.g
Capsella rubella
Carubv10006734m.g
I
0.672
MYB98
Arabidopsis lyrata
scaffold_702543.1
I
0.672
MYB98
Arabidopsis thaliana
AT4G18770
D
0.672
orange1.1g044021m.g
Citrus sinensis
orange1.1g044021m.g
I
0.671
Ciclev10017526m.g
Citrus clementina
Ciclev10017526m.g
I
0.671
SapurV1A.0041s0840
Salix purpurea
SapurV1A.0041s0840
N
0.670
Solyc03g112890.1
Solanum lycopersicum
Solyc03g112890.1
I
0.669
PGSC0003DMG400018092
Solanum tuberosum
PGSC0003DMG400018092
I
0.669
Lus10040684.g
Linum usitatissimum
Lus10040684.g
N
0.669
Bo3g157300
Brassica oleracea
Bo3g157300
I
0.669
GSMUA_Achr8G02290_001
Musa acuminata
GSMUA_Achr8G02290_001
N
0.668
OLONG_008158
Oryza longistaminata
OLONG_008158
I
0.662
OBART12G04500
Oryza barthii
OBART12G04500
I
0.662
OGLUM12G05330
Oryza glumaepatula
OGLUM12G05330
I
0.662
MTR_5g070020
Medicago truncatula
MTR_5g070020
N
0.662
ORGLA12G0042300
Oryza glaberrima
ORGLA12G0042300
I
0.662
OPUNC12G04510
Oryza punctata
OPUNC12G04510
I
0.662
ONIVA12G04220
Oryza nivara
ONIVA12G04220
I
0.662
OMERI12G02760
Oryza meridionalis
OMERI12G02760
I
0.662
BGIOSGA036541
Oryza indica
BGIOSGA036541
I
0.662
OBART12G04480
Oryza barthii
OBART12G04480
I
0.662