GLYMA19G13923 (Glycine max)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 GLYMA19G13923 T271772_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB98
M02301_2.00 		Arabidopsis thaliana
NNGTAACGKMN
NKMCGTTACNN		 PBM
Weirauch et al.(2014)
pTH8148 		0.707 0.796
MYB98
M07108_2.00 		Arabidopsis thaliana
DWWWHGTAACGKWHD
HDWMCGTTACDWWWH		 Dap-seq
OMalley et al.(2016)
MYB98_col_a 		0.707 0.796
MYB118
M07087_2.00 		Arabidopsis thaliana
DHWDHRDMCGTTACDWW
WWHGTAACGKHYDHWDH		 Dap-seq
OMalley et al.(2016)
MYB118_col_a 		0.683 0.785
MYB118
M07088_2.00 		Arabidopsis thaliana
DWWWYGTAACGKHYR
YRDMCGTTACRWWWH		 Dap-seq
OMalley et al.(2016)
MYB118_colamp_a 		0.683 0.785
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GLYMA19G13923.1 Myb 197 243
GLYMA19G13923.1 Myb 249 294

Links

Other Myb/SANT family TFs
Other Glycine max TFs

66 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GLYMA16G07927 Glycine max GLYMA16G07927 I 0.834
Gorai.001G263600 Gossypium raimondii Gorai.001G263600 I 0.776
TCM_016909 Theobroma cacao TCM_016909 I 0.739
Ca_19427 Cicer arietinum Ca_19427 I 0.733
MTR_7g037260 Medicago truncatula MTR_7g037260 I 0.732
Thhalv10005564m.g Eutrema salsugineum Thhalv10005564m.g I 0.731
GSMUA_Achr3G19490_001 Musa acuminata GSMUA_Achr3G19490_001 I 0.729
Carubv10018693m.g Capsella rubella Carubv10018693m.g I 0.728
Cagra.11216s0002 Capsella grandiflora Cagra.11216s0002 I 0.728
Bostr.0556s0457 Boechera stricta Bostr.0556s0457 I 0.722
PRUPE_ppa019507mg Prunus persica PRUPE_ppa019507mg I 0.719
MDP0000199939 Malus domestica MDP0000199939 I 0.718
MTR_4g088015 Medicago truncatula MTR_4g088015 I 0.714
Pm015681 Prunus mume Pm015681 I 0.710
Cla010586 Citrullus lanatus Cla010586 I 0.710
GSMUA_Achr3G09050_001 Musa acuminata GSMUA_Achr3G09050_001 N 0.709
GLYMA05G08761 Glycine max GLYMA05G08761 N 0.708
MYB98 Arabidopsis thaliana AT4G18770 D 0.707
MTR_3g077650 Medicago truncatula MTR_3g077650 I 0.705
Eucgr.B00301 Eucalyptus grandis Eucgr.B00301 I 0.702
SapurV1A.0571s0110 Salix purpurea SapurV1A.0571s0110 I 0.697
MYB98 Arabidopsis lyrata scaffold_702543.1 I 0.690
Bra025299 Brassica rapa Bra025299 I 0.688
VIT_14s0066g01010 Vitis vinifera VIT_14s0066g01010 I 0.687
Bo3g157300 Brassica oleracea Bo3g157300 I 0.685
MYB118 Arabidopsis lyrata fgenesh2_kg.5__560__AT3G27785.1 I 0.683
MYB118 Arabidopsis thaliana AT3G27785 D 0.683
cassava9008.m1 Manihot esculenta cassava9008.m1 I 0.683
Bra013346 Brassica rapa Bra013346 I 0.682
Cagra.4306s0015 Capsella grandiflora Cagra.4306s0015 I 0.682
Bostr.30275s0352 Boechera stricta Bostr.30275s0352 I 0.682
gene32198-v1.0-hybrid Fragaria vesca gene32198-v1.0-hybrid I 0.682
Bo1g019910 Brassica oleracea Bo1g019910 I 0.682
Pavir.J02718 Panicum virgatum Pavir.J02718 I 0.682
Pavir.J02497 Panicum virgatum Pavir.J02497 I 0.682
cassava33974.m1 Manihot esculenta cassava33974.m1 I 0.682
Carubv10006734m.g Capsella rubella Carubv10006734m.g I 0.682
evm.TU.supercontig_108.29 Carica papaya evm.TU.supercontig_108.29 I 0.680
Ca_17087 Cicer arietinum Ca_17087 I 0.678
MTR_7g451170 Medicago truncatula MTR_7g451170 N 0.678
MYB98 Vitis vinifera VIT_17s0000g08550 I 0.677
Thhalv10026824m.g Eutrema salsugineum Thhalv10026824m.g I 0.676
Bra020992 Brassica rapa Bra020992 I 0.676
Gorai.001G115300 Gossypium raimondii Gorai.001G115300 N 0.674
Gorai.011G044100 Gossypium raimondii Gorai.011G044100 N 0.674
Sb01g005100 Sorghum bicolor Sb01g005100 I 0.674
Ca_07482 Cicer arietinum Ca_07482 I 0.672
gene08006-v1.0-hybrid Fragaria vesca gene08006-v1.0-hybrid I 0.671
cassava26674.m1 Manihot esculenta cassava26674.m1 N 0.671
MDP0000319656 Malus domestica MDP0000319656 I 0.671
PRUPE_ppa018123mg Prunus persica PRUPE_ppa018123mg I 0.671
Pm000541 Prunus mume Pm000541 I 0.671
29681.m001315 Ricinus communis 29681.m001315 N 0.671
GRMZM5G870592 Zea mays GRMZM5G870592 I 0.668
POPTR_0001s25710 Populus trichocarpa POPTR_0001s25710 N 0.667
PGSC0003DMG400036895 Solanum tuberosum PGSC0003DMG400036895 I 0.666
Solyc06g071520.1 Solanum lycopersicum Solyc06g071520.1 I 0.666
mgf024290m Mimulus guttatus mgf024290m I 0.665
Si039046m.g Setaria italica Si039046m.g I 0.665
29917.m001977 Ricinus communis 29917.m001977 I 0.663
MTR_5g049190 Medicago truncatula MTR_5g049190 I 0.663
cassava26507.m1 Manihot esculenta cassava26507.m1 N 0.662
Ciclev10017526m.g Citrus clementina Ciclev10017526m.g I 0.662
orange1.1g044021m.g Citrus sinensis orange1.1g044021m.g I 0.662
orange1.1g046581m.g Citrus sinensis orange1.1g046581m.g N 0.661
Ciclev10030254m.g Citrus clementina Ciclev10030254m.g N 0.661