gene18635-v1.0-hybrid (Fragaria vesca)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02365 (NAM) IPR003441 gene18635-v1.0-hybrid T297959_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NAC012
M00971_2.00 		Arabidopsis thaliana
NYAMGYHANN
NNTDRCKTRN		 PBM
Lindemose et al.(2014)
SND1 		0.932 0.886
MDP0000762302
M02383_2.00 		Malus domestica
NNNAMKHNWN
NWNDMKTNNN		 PBM
Weirauch et al.(2014)
pTH9205 		0.931 0.895
NAC043
M02370_2.00 		Arabidopsis thaliana
NTTACGYWAN
NTWRCGTAAN		 PBM
Weirauch et al.(2014)
pTH8161 		0.913 0.895
NAC043
M07192_2.00 		Arabidopsis thaliana
TRCKTVHDNHNYAMG
CKTRNDNHDBAMGYA		 Dap-seq
OMalley et al.(2016)
NST1_colamp_a 		0.913 0.895
NAC043
M07193_2.00 		Arabidopsis thaliana
RCKTVHDNHNYAMGYWA
TWRCKTRNDNHDBAMGY		 Dap-seq
OMalley et al.(2016)
NST1_col_v31 		0.913 0.895
OS06G0131700
M02378_2.00 		Oryza sativa
NNNNHMDNND
HNNHKDNNNN		 PBM
Weirauch et al.(2014)
pTH8356 		0.889 0.877
SMB
M07184_2.00 		Arabidopsis thaliana
TWNCKTVHDNHNYAMGYWAYH
DRTWRCKTRNDNHDBAMGNWA		 Dap-seq
OMalley et al.(2016)
SMB_col_a 		0.886 0.816
SMB
M07185_2.00 		Arabidopsis thaliana
TWNCKTVNNNNNYAMG
CKTRNNNNNBAMGNWA		 Dap-seq
OMalley et al.(2016)
SMB_colamp_a 		0.886 0.816
NAC066
M00978_2.00 		Arabidopsis thaliana
NBNNHNBNNN
NNNVNDNNVN		 PBM
Lindemose et al.(2014)
NST2 		0.872 0.842
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
mrna18635.1-v1.0-hybrid NAC/NAM 16 143

Links

Other NAC/NAM family TFs
Other Fragaria vesca TFs

221 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Gorai.008G130300 Gossypium raimondii Gorai.008G130300 I 0.946
cassava32649.m1 Manihot esculenta cassava32649.m1 I 0.946
Gorai.008G259700 Gossypium raimondii Gorai.008G259700 I 0.936
gene18636-v1.0-hybrid Fragaria vesca gene18636-v1.0-hybrid I 0.936
MDP0000563165 Malus domestica MDP0000563165 I 0.936
Pm018292 Prunus mume Pm018292 I 0.936
PRUPE_ppa020746mg Prunus persica PRUPE_ppa020746mg I 0.936
cassava45846.m1 Manihot esculenta cassava45846.m1 I 0.935
TCM_015621 Theobroma cacao TCM_015621 I 0.933
cassava42638.valid.m1 Manihot esculenta cassava42638.valid.m1 I 0.933
Eucgr.E01053 Eucalyptus grandis Eucgr.E01053 I 0.933
30068.m002591 Ricinus communis 30068.m002591 I 0.933
orange1.1g014260m.g Citrus sinensis orange1.1g014260m.g I 0.933
Pm024260 Prunus mume Pm024260 I 0.933
Ciclev10021141m.g Citrus clementina Ciclev10021141m.g I 0.933
PRUPE_ppa006801mg Prunus persica PRUPE_ppa006801mg I 0.933
SapurV1A.0131s0060 Salix purpurea SapurV1A.0131s0060 I 0.933
Gorai.004G129200 Gossypium raimondii Gorai.004G129200 I 0.933
PK22182.1 Cannabis sativa PK22182.1 I 0.933
POPTR_0011s15640 Populus trichocarpa POPTR_0011s15640 I 0.933
gene01881-v1.0-hybrid Fragaria vesca gene01881-v1.0-hybrid I 0.933
SapurV1A.0941s0070 Salix purpurea SapurV1A.0941s0070 I 0.932
Carubv10011900m.g Capsella rubella Carubv10011900m.g I 0.932
POPTR_0001s45250 Populus trichocarpa POPTR_0001s45250 I 0.932
Bo5g049360 Brassica oleracea Bo5g049360 I 0.932
Cagra.14513s0001 Capsella grandiflora Cagra.14513s0001 I 0.932
Thhalv10009336m.g Eutrema salsugineum Thhalv10009336m.g I 0.932
ANAC012 Arabidopsis lyrata fgenesh1_pm.C_scaffold_1002619 I 0.932
SapurV1A.2717s0010 Salix purpurea SapurV1A.2717s0010 I 0.932
NAC012 Arabidopsis thaliana AT1G32770 D 0.932
MDP0000762302 Malus domestica MDP0000762302 D 0.931
Bostr.3359s0081 Boechera stricta Bostr.3359s0081 I 0.931
MDP0000140229 Malus domestica MDP0000140229 I 0.931
PK04961.1 Cannabis sativa PK04961.1 I 0.931
Gorai.003G077700 Gossypium raimondii Gorai.003G077700 I 0.930
AMTR_s00113p00077540 Amborella trichopoda AMTR_s00113p00077540 I 0.930
Solyc10g005010.2 Solanum lycopersicum Solyc10g005010.2 I 0.930
MTR_8g024480 Medicago truncatula MTR_8g024480 I 0.930
PGSC0003DMG400011268 Solanum tuberosum PGSC0003DMG400011268 I 0.930
Ca_22426 Cicer arietinum Ca_22426 I 0.930
GLYMA16G02200 Glycine max GLYMA16G02200 I 0.930
27964.m000369 Ricinus communis 27964.m000369 I 0.930
GLYMA07G05660 Glycine max GLYMA07G05660 I 0.930
LjSGA_027787.1 Lotus japonicus LjSGA_027787.1 I 0.930
Bra023288 Brassica rapa Bra023288 I 0.929
cassava33021.m1 Manihot esculenta cassava33021.m1 I 0.929
Ca_22425 Cicer arietinum Ca_22425 I 0.929
Lus10017340.g Linum usitatissimum Lus10017340.g I 0.929
Lus10001664.g Linum usitatissimum Lus10001664.g I 0.929
Cucsa.120870 Cucumis sativus Cucsa.120870 I 0.928
Cla006806 Citrullus lanatus Cla006806 I 0.928
evm.TU.supercontig_37.89 Carica papaya evm.TU.supercontig_37.89 I 0.928
Gorai.006G205300 Gossypium raimondii Gorai.006G205300 I 0.928
TCM_005047 Theobroma cacao TCM_005047 I 0.927
Lus10030205.g Linum usitatissimum Lus10030205.g I 0.927
SapurV1A.0162s0220 Salix purpurea SapurV1A.0162s0220 I 0.926
Lus10002687.g Linum usitatissimum Lus10002687.g I 0.926
POPTR_0014s10060 Populus trichocarpa POPTR_0014s10060 I 0.926
Bo5g086900 Brassica oleracea Bo5g086900 I 0.925
Bra010183 Brassica rapa Bra010183 I 0.925
Gorai.007G112500 Gossypium raimondii Gorai.007G112500 I 0.925
Lus10033239.g Linum usitatissimum Lus10033239.g I 0.923
Lus10008271.g Linum usitatissimum Lus10008271.g I 0.923
POPTR_0002s17950 Populus trichocarpa POPTR_0002s17950 I 0.922
Gorai.001G150800 Gossypium raimondii Gorai.001G150800 I 0.921
GSMUA_Achr3G12230_001 Musa acuminata GSMUA_Achr3G12230_001 I 0.917
GSMUA_AchrUn_randomG21980_001 Musa acuminata GSMUA_AchrUn_randomG21980_001 I 0.917
Ciclev10024035m.g Citrus clementina Ciclev10024035m.g I 0.916
orange1.1g015853m.g Citrus sinensis orange1.1g015853m.g I 0.916
Cucsa.193460 Cucumis sativus Cucsa.193460 I 0.915
ANAC012 Vitis vinifera VIT_02s0025g02710 I 0.915
Cla011508 Citrullus lanatus Cla011508 I 0.915
VIT_15s0048g02660 Vitis vinifera VIT_15s0048g02660 I 0.915
GSMUA_Achr9G24450_001 Musa acuminata GSMUA_Achr9G24450_001 I 0.914
GSMUA_Achr7G05980_001 Musa acuminata GSMUA_Achr7G05980_001 I 0.913
Thhalv10001506m.g Eutrema salsugineum Thhalv10001506m.g I 0.913
Bo4g006990 Brassica oleracea Bo4g006990 I 0.913
Cagra.0050s0024 Capsella grandiflora Cagra.0050s0024 I 0.913
Bra004509 Brassica rapa Bra004509 I 0.913
Bostr.25993s0090 Boechera stricta Bostr.25993s0090 I 0.913
Carubv10023503m.g Capsella rubella Carubv10023503m.g I 0.913
NST1 Arabidopsis lyrata scaffold_403649.1 I 0.913
NAC043 Arabidopsis thaliana AT2G46770 D 0.913
mgf022455m Mimulus guttatus mgf022455m I 0.912
Lus10009939.g Linum usitatissimum Lus10009939.g I 0.911
Aquca_037_00272 Aquilegia coerulea Aquca_037_00272 I 0.911
PDK_20s1408241g001 Phoenix dactylifera PDK_20s1408241g001 I 0.910
Bo4g197330 Brassica oleracea Bo4g197330 I 0.909
Lus10030143.g Linum usitatissimum Lus10030143.g I 0.909
Bra040486 Brassica rapa Bra040486 I 0.909
Cagra.0483s0052 Capsella grandiflora Cagra.0483s0052 I 0.908
Carubv10019223m.g Capsella rubella Carubv10019223m.g I 0.908
Sb07g001550 Sorghum bicolor Sb07g001550 I 0.903
ONIVA06G20460 Oryza nivara ONIVA06G20460 I 0.903
OB06G24850 Oryza brachyantha OB06G24850 I 0.903
OBART06G17120 Oryza barthii OBART06G17120 I 0.903
OMERI06G17980 Oryza meridionalis OMERI06G17980 I 0.903
Pavir.J21162 Panicum virgatum Pavir.J21162 I 0.903
OS06G0530400 Oryza sativa OS06G0530400 I 0.903
GRMZM2G092465 Zea mays GRMZM2G092465 I 0.903
Pavir.J20698 Panicum virgatum Pavir.J20698 I 0.903
BGIOSGA021116 Oryza indica BGIOSGA021116 I 0.903
OGLUM06G18230 Oryza glumaepatula OGLUM06G18230 I 0.903
ORUFI06G18140 Oryza rufipogon ORUFI06G18140 I 0.903
OGLUM02G10770 Oryza glumaepatula OGLUM02G10770 I 0.902
OLONG_007664 Oryza longistaminata OLONG_007664 I 0.902
BGIOSGA007898 Oryza indica BGIOSGA007898 I 0.902
ONIVA02G12010 Oryza nivara ONIVA02G12010 I 0.902
OBART02G10820 Oryza barthii OBART02G10820 I 0.902
ORGLA02G0097800 Oryza glaberrima ORGLA02G0097800 I 0.902
GRMZM2G041746 Zea mays GRMZM2G041746 I 0.901
LPERR06G14120 Leersia perrieri LPERR06G14120 I 0.901
GRMZM2G104074 Zea mays GRMZM2G104074 I 0.901
Pavir.J07835 Panicum virgatum Pavir.J07835 I 0.901
BRADI3G09520 Brachypodium distachyon BRADI3G09520 I 0.901
OPUNC06G15490 Oryza punctata OPUNC06G15490 I 0.901
Sb10g020860 Sorghum bicolor Sb10g020860 I 0.901
ORUFI02G10740 Oryza rufipogon ORUFI02G10740 I 0.900
OS02G0252200 Oryza sativa OS02G0252200 I 0.900
SapurV1A.0003s0530 Salix purpurea SapurV1A.0003s0530 I 0.900
OB02G19660 Oryza brachyantha OB02G19660 I 0.900
Bra003478 Brassica rapa Bra003478 I 0.899
Bostr.13158s0196 Boechera stricta Bostr.13158s0196 I 0.899
BRADI1G38730 Brachypodium distachyon BRADI1G38730 I 0.899
F775_42361 Aegilops tauschii F775_42361 I 0.899
LPERR02G09170 Leersia perrieri LPERR02G09170 I 0.899
Bra007640 Brassica rapa Bra007640 I 0.899
Traes_7DL_AD6EAD1A6 Triticum aestivum Traes_7DL_AD6EAD1A6 I 0.899
Traes_7DL_AD6EAD1A61 Triticum aestivum Traes_7DL_AD6EAD1A61 I 0.899
TRIUR3_14210 Triticum urartu TRIUR3_14210 I 0.899
MLOC_17128 Hordeum vulgare MLOC_17128 I 0.899
Traes_7AL_46F73E667 Triticum aestivum Traes_7AL_46F73E667 I 0.899
OPUNC02G09610 Oryza punctata OPUNC02G09610 I 0.899
Si006565m.g Setaria italica Si006565m.g I 0.898
evm.TU.supercontig_118.26 Carica papaya evm.TU.supercontig_118.26 I 0.898
Sb04g009180 Sorghum bicolor Sb04g009180 I 0.897
Si007822m.g Setaria italica Si007822m.g I 0.897
Sb10g002120 Sorghum bicolor Sb10g002120 I 0.897
F775_11081 Aegilops tauschii F775_11081 I 0.897
Traes_7DL_1AD9A3E8D Triticum aestivum Traes_7DL_1AD9A3E8D I 0.897
Pavir.J05053 Panicum virgatum Pavir.J05053 I 0.897
MLOC_66924 Hordeum vulgare MLOC_66924 I 0.897
Pavir.Da01009 Panicum virgatum Pavir.Da01009 I 0.897
Traes_7AL_B000BC0DD Triticum aestivum Traes_7AL_B000BC0DD I 0.897
GRMZM2G171395 Zea mays GRMZM2G171395 I 0.897
BRADI3G13727 Brachypodium distachyon BRADI3G13727 I 0.895
Pavir.Aa02770 Panicum virgatum Pavir.Aa02770 I 0.894
Pavir.Ab01037 Panicum virgatum Pavir.Ab01037 I 0.894
Si017641m.g Setaria italica Si017641m.g I 0.894
GRMZM2G069047 Zea mays GRMZM2G069047 I 0.894
orange1.1g046523m.g Citrus sinensis orange1.1g046523m.g I 0.892
PK10271.1 Cannabis sativa PK10271.1 I 0.892
Ciclev10006623m.g Citrus clementina Ciclev10006623m.g I 0.892
Pm010886 Prunus mume Pm010886 I 0.891
Ca_13929 Cicer arietinum Ca_13929 I 0.891
29725.m000235 Ricinus communis 29725.m000235 I 0.891
PRUPE_ppa025341mg Prunus persica PRUPE_ppa025341mg I 0.891
Eucgr.D01671 Eucalyptus grandis Eucgr.D01671 I 0.890
NST2 Arabidopsis lyrata scaffold_503455.1 I 0.890
gene19898-v1.0-hybrid Fragaria vesca gene19898-v1.0-hybrid I 0.890
OMERI06G01850 Oryza meridionalis OMERI06G01850 I 0.889
OGLUM08G01180 Oryza glumaepatula OGLUM08G01180 I 0.889
OPUNC06G01800 Oryza punctata OPUNC06G01800 I 0.889
ORGLA08G0004900 Oryza glaberrima ORGLA08G0004900 I 0.889
ORGLA06G0019800 Oryza glaberrima ORGLA06G0019800 I 0.889
OPUNC08G01110 Oryza punctata OPUNC08G01110 I 0.889
ONIVA08G01130 Oryza nivara ONIVA08G01130 I 0.889
OBART06G01950 Oryza barthii OBART06G01950 I 0.889
LPERR06G01790 Leersia perrieri LPERR06G01790 I 0.889
BGIOSGA027883 Oryza indica BGIOSGA027883 I 0.889
BGIOSGA022006 Oryza indica BGIOSGA022006 I 0.889
LPERR08G01440 Leersia perrieri LPERR08G01440 I 0.889
OB06G11970 Oryza brachyantha OB06G11970 I 0.889
OBART08G01110 Oryza barthii OBART08G01110 I 0.889
ORUFI06G01950 Oryza rufipogon ORUFI06G01950 I 0.889
OB08G11290 Oryza brachyantha OB08G11290 I 0.889
OGLUM06G01950 Oryza glumaepatula OGLUM06G01950 I 0.889
ONIVA06G02290 Oryza nivara ONIVA06G02290 I 0.889
OS06G0131700 Oryza sativa OS06G0131700 D 0.889
OS08G0115800 Oryza sativa OS08G0115800 I 0.889
ORUFI08G01170 Oryza rufipogon ORUFI08G01170 I 0.889
Bra035127 Brassica rapa Bra035127 I 0.888
Bo6g123980 Brassica oleracea Bo6g123980 I 0.888
SapurV1A.0093s0460 Salix purpurea SapurV1A.0093s0460 I 0.886
SMB Vitis vinifera VIT_19s0085g01210 I 0.886
Carubv10020504m.g Capsella rubella Carubv10020504m.g I 0.886
Cagra.1725s0032 Capsella grandiflora Cagra.1725s0032 I 0.886
MTR_2g062730 Medicago truncatula MTR_2g062730 I 0.886
cassava39971.m1 Manihot esculenta cassava39971.m1 I 0.886
GLYMA08G17140 Glycine max GLYMA08G17140 I 0.886
Bo6g080930 Brassica oleracea Bo6g080930 I 0.886
POPTR_0008s07950 Populus trichocarpa POPTR_0008s07950 I 0.886
LjSGA_059487.1 Lotus japonicus LjSGA_059487.1 I 0.886
SMB Arabidopsis thaliana AT1G79580 D 0.886
Bostr.20129s0396 Boechera stricta Bostr.20129s0396 I 0.886
Thhalv10019534m.g Eutrema salsugineum Thhalv10019534m.g I 0.886
cassava32687.m1 Manihot esculenta cassava32687.m1 I 0.886
SMB Arabidopsis lyrata scaffold_202942.1 I 0.886
POPTR_0010s18420 Populus trichocarpa POPTR_0010s18420 I 0.886
SapurV1A.0164s0070 Salix purpurea SapurV1A.0164s0070 I 0.886
Cla005561 Citrullus lanatus Cla005561 I 0.884
OMERI08G01360 Oryza meridionalis OMERI08G01360 I 0.884
Gorai.004G268500 Gossypium raimondii Gorai.004G268500 I 0.883
MDP0000168681 Malus domestica MDP0000168681 N 0.882
TCM_033728 Theobroma cacao TCM_033728 I 0.882
Bo2g095440 Brassica oleracea Bo2g095440 I 0.881
MDP0000501518 Malus domestica MDP0000501518 I 0.881
MDP0000652584 Malus domestica MDP0000652584 I 0.881
mgf025569m Mimulus guttatus mgf025569m I 0.880
MTR_4g035590 Medicago truncatula MTR_4g035590 I 0.879
Ca_15792 Cicer arietinum Ca_15792 I 0.879
GRMZM2G091490 Zea mays GRMZM2G091490 I 0.878
Bra008423 Brassica rapa Bra008423 I 0.877
PGSC0003DMG400009665 Solanum tuberosum PGSC0003DMG400009665 I 0.877
Solyc12g017400.1 Solanum lycopersicum Solyc12g017400.1 I 0.877
Bra003602 Brassica rapa Bra003602 I 0.876
GLYMA15G42050 Glycine max GLYMA15G42050 I 0.874
Cucsa.240210 Cucumis sativus Cucsa.240210 I 0.873
GLYMA09G36820 Glycine max GLYMA09G36820 I 0.873
NAC066 Arabidopsis thaliana AT3G61910 D 0.872
mg017416m Mimulus guttatus mg017416m I 0.872