Lus10002687.g (Linum usitatissimum)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02365 (NAM) IPR003441 Lus10002687.g T298194_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NAC043
M02370_2.00 		Arabidopsis thaliana
NTTACGYWAN
NTWRCGTAAN		 PBM
Weirauch et al.(2014)
pTH8161 		0.956 0.904
NAC043
M07192_2.00 		Arabidopsis thaliana
TRCKTVHDNHNYAMG
CKTRNDNHDBAMGYA		 Dap-seq
OMalley et al.(2016)
NST1_colamp_a 		0.956 0.904
NAC043
M07193_2.00 		Arabidopsis thaliana
RCKTVHDNHNYAMGYWA
TWRCKTRNDNHDBAMGY		 Dap-seq
OMalley et al.(2016)
NST1_col_v31 		0.956 0.904
OS06G0131700
M02378_2.00 		Oryza sativa
NNNNHMDNND
HNNHKDNNNN		 PBM
Weirauch et al.(2014)
pTH8356 		0.934 0.886
MDP0000762302
M02383_2.00 		Malus domestica
NNNAMKHNWN
NWNDMKTNNN		 PBM
Weirauch et al.(2014)
pTH9205 		0.934 0.912
NAC066
M00978_2.00 		Arabidopsis thaliana
NBNNHNBNNN
NNNVNDNNVN		 PBM
Lindemose et al.(2014)
NST2 		0.929 0.895
NAC012
M00971_2.00 		Arabidopsis thaliana
NYAMGYHANN
NNTDRCKTRN		 PBM
Lindemose et al.(2014)
SND1 		0.928 0.895
SMB
M07184_2.00 		Arabidopsis thaliana
TWNCKTVHDNHNYAMGYWAYH
DRTWRCKTRNDNHDBAMGNWA		 Dap-seq
OMalley et al.(2016)
SMB_col_a 		0.880 0.807
SMB
M07185_2.00 		Arabidopsis thaliana
TWNCKTVNNNNNYAMG
CKTRNNNNNBAMGNWA		 Dap-seq
OMalley et al.(2016)
SMB_colamp_a 		0.880 0.807
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Lus10002687 NAC/NAM 12 139

Links

Other NAC/NAM family TFs
Other Linum usitatissimum TFs

256 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Lus10030205.g Linum usitatissimum Lus10030205.g I 0.968
27964.m000369 Ricinus communis 27964.m000369 I 0.967
Cla006806 Citrullus lanatus Cla006806 I 0.966
cassava33021.m1 Manihot esculenta cassava33021.m1 I 0.966
Cucsa.120870 Cucumis sativus Cucsa.120870 I 0.966
MDP0000563165 Malus domestica MDP0000563165 I 0.965
gene18636-v1.0-hybrid Fragaria vesca gene18636-v1.0-hybrid I 0.965
TCM_005047 Theobroma cacao TCM_005047 I 0.965
PRUPE_ppa020746mg Prunus persica PRUPE_ppa020746mg I 0.965
Pm018292 Prunus mume Pm018292 I 0.965
Ca_22425 Cicer arietinum Ca_22425 I 0.964
Gorai.007G112500 Gossypium raimondii Gorai.007G112500 I 0.964
LjSGA_027787.1 Lotus japonicus LjSGA_027787.1 I 0.963
AMTR_s00113p00077540 Amborella trichopoda AMTR_s00113p00077540 I 0.963
GLYMA07G05660 Glycine max GLYMA07G05660 I 0.963
Ca_22426 Cicer arietinum Ca_22426 I 0.963
GLYMA16G02200 Glycine max GLYMA16G02200 I 0.963
MTR_8g024480 Medicago truncatula MTR_8g024480 I 0.963
Gorai.001G150800 Gossypium raimondii Gorai.001G150800 I 0.962
SapurV1A.0162s0220 Salix purpurea SapurV1A.0162s0220 I 0.962
POPTR_0014s10060 Populus trichocarpa POPTR_0014s10060 I 0.962
POPTR_0002s17950 Populus trichocarpa POPTR_0002s17950 I 0.959
ANAC012 Vitis vinifera VIT_02s0025g02710 I 0.959
Bo4g197330 Brassica oleracea Bo4g197330 I 0.958
Bra040486 Brassica rapa Bra040486 I 0.958
NST1 Arabidopsis lyrata scaffold_403649.1 I 0.956
Bra004509 Brassica rapa Bra004509 I 0.956
Bo4g006990 Brassica oleracea Bo4g006990 I 0.956
Thhalv10001506m.g Eutrema salsugineum Thhalv10001506m.g I 0.956
orange1.1g015853m.g Citrus sinensis orange1.1g015853m.g I 0.956
Bostr.25993s0090 Boechera stricta Bostr.25993s0090 I 0.956
NAC043 Arabidopsis thaliana AT2G46770 D 0.956
Ciclev10024035m.g Citrus clementina Ciclev10024035m.g I 0.956
Cagra.0050s0024 Capsella grandiflora Cagra.0050s0024 I 0.956
Carubv10023503m.g Capsella rubella Carubv10023503m.g I 0.956
VIT_15s0048g02660 Vitis vinifera VIT_15s0048g02660 I 0.955
Cla011508 Citrullus lanatus Cla011508 I 0.954
GSMUA_Achr9G24450_001 Musa acuminata GSMUA_Achr9G24450_001 I 0.954
Cucsa.193460 Cucumis sativus Cucsa.193460 I 0.954
PK04961.1 Cannabis sativa PK04961.1 I 0.954
GSMUA_Achr3G12230_001 Musa acuminata GSMUA_Achr3G12230_001 I 0.953
Aquca_037_00272 Aquilegia coerulea Aquca_037_00272 I 0.952
GSMUA_Achr7G05980_001 Musa acuminata GSMUA_Achr7G05980_001 I 0.951
mgf022455m Mimulus guttatus mgf022455m I 0.951
Cagra.0483s0052 Capsella grandiflora Cagra.0483s0052 I 0.950
Carubv10019223m.g Capsella rubella Carubv10019223m.g I 0.950
PDK_20s1408241g001 Phoenix dactylifera PDK_20s1408241g001 I 0.949
cassava32649.m1 Manihot esculenta cassava32649.m1 I 0.948
Gorai.008G130300 Gossypium raimondii Gorai.008G130300 I 0.947
Si006565m.g Setaria italica Si006565m.g I 0.947
SapurV1A.0003s0530 Salix purpurea SapurV1A.0003s0530 I 0.947
Sb10g002120 Sorghum bicolor Sb10g002120 I 0.947
GRMZM2G171395 Zea mays GRMZM2G171395 I 0.947
GSMUA_AchrUn_randomG21980_001 Musa acuminata GSMUA_AchrUn_randomG21980_001 I 0.946
Bra003478 Brassica rapa Bra003478 I 0.945
Bra007640 Brassica rapa Bra007640 I 0.945
Bostr.13158s0196 Boechera stricta Bostr.13158s0196 I 0.945
GRMZM2G069047 Zea mays GRMZM2G069047 I 0.942
Sb07g001550 Sorghum bicolor Sb07g001550 I 0.941
Pavir.J21162 Panicum virgatum Pavir.J21162 I 0.941
F775_11081 Aegilops tauschii F775_11081 I 0.941
MLOC_66924 Hordeum vulgare MLOC_66924 I 0.941
Traes_7AL_B000BC0DD Triticum aestivum Traes_7AL_B000BC0DD I 0.941
GRMZM2G092465 Zea mays GRMZM2G092465 I 0.941
Pavir.J20698 Panicum virgatum Pavir.J20698 I 0.941
Traes_7DL_1AD9A3E8D Triticum aestivum Traes_7DL_1AD9A3E8D I 0.941
NST2 Arabidopsis lyrata scaffold_503455.1 I 0.940
Eucgr.D01671 Eucalyptus grandis Eucgr.D01671 I 0.939
Pm024260 Prunus mume Pm024260 I 0.938
PRUPE_ppa006801mg Prunus persica PRUPE_ppa006801mg I 0.938
Gorai.004G129200 Gossypium raimondii Gorai.004G129200 I 0.936
TCM_015621 Theobroma cacao TCM_015621 I 0.936
30068.m002591 Ricinus communis 30068.m002591 I 0.936
orange1.1g014260m.g Citrus sinensis orange1.1g014260m.g I 0.936
Ciclev10021141m.g Citrus clementina Ciclev10021141m.g I 0.936
cassava42638.valid.m1 Manihot esculenta cassava42638.valid.m1 I 0.936
gene01881-v1.0-hybrid Fragaria vesca gene01881-v1.0-hybrid I 0.936
Pavir.J07835 Panicum virgatum Pavir.J07835 I 0.935
ORGLA08G0004900 Oryza glaberrima ORGLA08G0004900 I 0.934
LPERR08G01440 Leersia perrieri LPERR08G01440 I 0.934
OPUNC08G01110 Oryza punctata OPUNC08G01110 I 0.934
BGIOSGA022006 Oryza indica BGIOSGA022006 I 0.934
ORGLA06G0019800 Oryza glaberrima ORGLA06G0019800 I 0.934
OS06G0131700 Oryza sativa OS06G0131700 D 0.934
OPUNC06G01800 Oryza punctata OPUNC06G01800 I 0.934
OB06G11970 Oryza brachyantha OB06G11970 I 0.934
LPERR06G01790 Leersia perrieri LPERR06G01790 I 0.934
OS08G0115800 Oryza sativa OS08G0115800 I 0.934
ORUFI06G01950 Oryza rufipogon ORUFI06G01950 I 0.934
ORUFI08G01170 Oryza rufipogon ORUFI08G01170 I 0.934
MDP0000762302 Malus domestica MDP0000762302 D 0.934
BGIOSGA027883 Oryza indica BGIOSGA027883 I 0.934
OMERI06G01850 Oryza meridionalis OMERI06G01850 I 0.934
OGLUM06G01950 Oryza glumaepatula OGLUM06G01950 I 0.934
OBART08G01110 Oryza barthii OBART08G01110 I 0.934
OB08G11290 Oryza brachyantha OB08G11290 I 0.934
OBART06G01950 Oryza barthii OBART06G01950 I 0.934
MDP0000140229 Malus domestica MDP0000140229 I 0.934
OGLUM08G01180 Oryza glumaepatula OGLUM08G01180 I 0.934
ONIVA08G01130 Oryza nivara ONIVA08G01130 I 0.934
ONIVA06G02290 Oryza nivara ONIVA06G02290 I 0.934
cassava45846.m1 Manihot esculenta cassava45846.m1 I 0.933
Gorai.003G077700 Gossypium raimondii Gorai.003G077700 I 0.933
PK22182.1 Cannabis sativa PK22182.1 I 0.932
OMERI08G01360 Oryza meridionalis OMERI08G01360 I 0.931
POPTR_0011s15640 Populus trichocarpa POPTR_0011s15640 I 0.930
Gorai.008G259700 Gossypium raimondii Gorai.008G259700 I 0.930
SapurV1A.0131s0060 Salix purpurea SapurV1A.0131s0060 I 0.930
Eucgr.E01053 Eucalyptus grandis Eucgr.E01053 I 0.930
Bostr.3359s0081 Boechera stricta Bostr.3359s0081 I 0.929
NAC066 Arabidopsis thaliana AT3G61910 D 0.929
Lus10001664.g Linum usitatissimum Lus10001664.g I 0.928
PGSC0003DMG400011268 Solanum tuberosum PGSC0003DMG400011268 I 0.928
NAC012 Arabidopsis thaliana AT1G32770 D 0.928
Lus10017340.g Linum usitatissimum Lus10017340.g I 0.928
Bo5g049360 Brassica oleracea Bo5g049360 I 0.928
Carubv10011900m.g Capsella rubella Carubv10011900m.g I 0.928
Thhalv10009336m.g Eutrema salsugineum Thhalv10009336m.g I 0.928
Solyc10g005010.2 Solanum lycopersicum Solyc10g005010.2 I 0.928
ANAC012 Arabidopsis lyrata fgenesh1_pm.C_scaffold_1002619 I 0.928
Cagra.14513s0001 Capsella grandiflora Cagra.14513s0001 I 0.928
Bra023288 Brassica rapa Bra023288 I 0.926
gene18635-v1.0-hybrid Fragaria vesca gene18635-v1.0-hybrid I 0.926
Bo6g079180 Brassica oleracea Bo6g079180 I 0.926
evm.TU.supercontig_37.89 Carica papaya evm.TU.supercontig_37.89 I 0.926
GSMUA_Achr2G20020_001 Musa acuminata GSMUA_Achr2G20020_001 I 0.925
Lus10008271.g Linum usitatissimum Lus10008271.g I 0.925
Lus10033239.g Linum usitatissimum Lus10033239.g I 0.925
SapurV1A.2717s0010 Salix purpurea SapurV1A.2717s0010 I 0.924
SapurV1A.0941s0070 Salix purpurea SapurV1A.0941s0070 I 0.924
BRADI3G13727 Brachypodium distachyon BRADI3G13727 I 0.924
POPTR_0001s45250 Populus trichocarpa POPTR_0001s45250 I 0.924
Gorai.006G205300 Gossypium raimondii Gorai.006G205300 I 0.923
GSMUA_Achr10G14400_001 Musa acuminata GSMUA_Achr10G14400_001 I 0.922
Bra010183 Brassica rapa Bra010183 I 0.921
GRMZM2G091490 Zea mays GRMZM2G091490 I 0.921
Aquca_030_00252 Aquilegia coerulea Aquca_030_00252 I 0.921
Bo5g086900 Brassica oleracea Bo5g086900 I 0.921
AMTR_s00068p00207380 Amborella trichopoda AMTR_s00068p00207380 I 0.918
GRMZM2G104074 Zea mays GRMZM2G104074 I 0.911
GRMZM2G041746 Zea mays GRMZM2G041746 I 0.911
Sb10g020860 Sorghum bicolor Sb10g020860 I 0.911
F775_42361 Aegilops tauschii F775_42361 I 0.909
TRIUR3_14210 Triticum urartu TRIUR3_14210 I 0.909
Traes_7DL_AD6EAD1A61 Triticum aestivum Traes_7DL_AD6EAD1A61 I 0.909
Traes_7AL_46F73E667 Triticum aestivum Traes_7AL_46F73E667 I 0.909
MLOC_17128 Hordeum vulgare MLOC_17128 I 0.909
Traes_7DL_AD6EAD1A6 Triticum aestivum Traes_7DL_AD6EAD1A6 I 0.909
BRADI1G38730 Brachypodium distachyon BRADI1G38730 I 0.908
Sb04g009180 Sorghum bicolor Sb04g009180 I 0.907
Pavir.J05053 Panicum virgatum Pavir.J05053 I 0.907
Si007822m.g Setaria italica Si007822m.g I 0.907
Pavir.Da01009 Panicum virgatum Pavir.Da01009 I 0.907
Lus10030143.g Linum usitatissimum Lus10030143.g I 0.906
OB02G19660 Oryza brachyantha OB02G19660 I 0.905
Si017641m.g Setaria italica Si017641m.g I 0.905
LPERR02G09170 Leersia perrieri LPERR02G09170 I 0.904
Pavir.Aa02770 Panicum virgatum Pavir.Aa02770 I 0.904
BRADI3G09520 Brachypodium distachyon BRADI3G09520 I 0.904
Pavir.Ab01037 Panicum virgatum Pavir.Ab01037 I 0.904
Lus10009939.g Linum usitatissimum Lus10009939.g I 0.903
evm.TU.supercontig_118.26 Carica papaya evm.TU.supercontig_118.26 I 0.898
PGSC0003DMG400012113 Solanum tuberosum PGSC0003DMG400012113 I 0.894
OPUNC02G09610 Oryza punctata OPUNC02G09610 I 0.892
Lus10032238.g Linum usitatissimum Lus10032238.g I 0.892
Pm010886 Prunus mume Pm010886 I 0.890
Ca_13929 Cicer arietinum Ca_13929 I 0.890
gene19898-v1.0-hybrid Fragaria vesca gene19898-v1.0-hybrid I 0.890
PRUPE_ppa025341mg Prunus persica PRUPE_ppa025341mg I 0.890
29725.m000235 Ricinus communis 29725.m000235 I 0.890
TRIUR3_14543 Triticum urartu TRIUR3_14543 I 0.889
F775_21627 Aegilops tauschii F775_21627 I 0.889
TRIUR3_27911 Triticum urartu TRIUR3_27911 I 0.887
PK10271.1 Cannabis sativa PK10271.1 I 0.886
TRIUR3_14544 Triticum urartu TRIUR3_14544 I 0.886
ORUFI02G10740 Oryza rufipogon ORUFI02G10740 I 0.885
OS02G0252200 Oryza sativa OS02G0252200 I 0.885
MTR_2g062730 Medicago truncatula MTR_2g062730 I 0.885
ORGLA02G0097800 Oryza glaberrima ORGLA02G0097800 I 0.885
ONIVA02G12010 Oryza nivara ONIVA02G12010 I 0.885
OBART02G10820 Oryza barthii OBART02G10820 I 0.885
OGLUM02G10770 Oryza glumaepatula OGLUM02G10770 I 0.885
LjSGA_059487.1 Lotus japonicus LjSGA_059487.1 I 0.885
OLONG_007664 Oryza longistaminata OLONG_007664 I 0.885
BGIOSGA007898 Oryza indica BGIOSGA007898 I 0.885
Aquca_013_00692 Aquilegia coerulea Aquca_013_00692 I 0.885
GLYMA08G17140 Glycine max GLYMA08G17140 I 0.885
cassava32687.m1 Manihot esculenta cassava32687.m1 I 0.885
ORUFI06G18140 Oryza rufipogon ORUFI06G18140 I 0.882
OS06G0530400 Oryza sativa OS06G0530400 I 0.882
SapurV1A.0164s0070 Salix purpurea SapurV1A.0164s0070 I 0.882
OB06G24850 Oryza brachyantha OB06G24850 I 0.882
POPTR_0010s18420 Populus trichocarpa POPTR_0010s18420 I 0.882
POPTR_0008s07950 Populus trichocarpa POPTR_0008s07950 I 0.882
BGIOSGA021116 Oryza indica BGIOSGA021116 I 0.882
OGLUM06G18230 Oryza glumaepatula OGLUM06G18230 I 0.882
OBART06G17120 Oryza barthii OBART06G17120 I 0.882
SapurV1A.0093s0460 Salix purpurea SapurV1A.0093s0460 I 0.882
OMERI06G17980 Oryza meridionalis OMERI06G17980 I 0.882
OPUNC06G15490 Oryza punctata OPUNC06G15490 I 0.882
ONIVA06G20460 Oryza nivara ONIVA06G20460 I 0.882
Bo6g123980 Brassica oleracea Bo6g123980 I 0.882
Gorai.004G268500 Gossypium raimondii Gorai.004G268500 I 0.882
LPERR06G14120 Leersia perrieri LPERR06G14120 I 0.882
TCM_033728 Theobroma cacao TCM_033728 I 0.882
Bra035127 Brassica rapa Bra035127 I 0.882
Cucsa.240210 Cucumis sativus Cucsa.240210 I 0.881
SMB Vitis vinifera VIT_19s0085g01210 I 0.881
GSMUA_Achr10G21750_001 Musa acuminata GSMUA_Achr10G21750_001 I 0.881
cassava39971.m1 Manihot esculenta cassava39971.m1 I 0.881
Cagra.1725s0032 Capsella grandiflora Cagra.1725s0032 I 0.880
TRIUR3_14545 Triticum urartu TRIUR3_14545 I 0.880
Cla005561 Citrullus lanatus Cla005561 I 0.880
MDP0000501518 Malus domestica MDP0000501518 I 0.880
Carubv10020504m.g Capsella rubella Carubv10020504m.g I 0.880
MDP0000652584 Malus domestica MDP0000652584 I 0.880
SMB Arabidopsis thaliana AT1G79580 D 0.880
Bostr.20129s0396 Boechera stricta Bostr.20129s0396 I 0.880
SMB Arabidopsis lyrata scaffold_202942.1 I 0.880
Thhalv10019534m.g Eutrema salsugineum Thhalv10019534m.g I 0.880
Traes_4AL_3AFF9664B Triticum aestivum Traes_4AL_3AFF9664B I 0.880
Traes_4AL_8FABAA6C3 Triticum aestivum Traes_4AL_8FABAA6C3 I 0.880
Bo6g080930 Brassica oleracea Bo6g080930 I 0.880
GLYMA19G44890 Glycine max GLYMA19G44890 I 0.879
Solyc12g017400.1 Solanum lycopersicum Solyc12g017400.1 I 0.876
TCM_016035 Theobroma cacao TCM_016035 I 0.876
POPTR_0001s00220 Populus trichocarpa POPTR_0001s00220 I 0.876
PGSC0003DMG400009665 Solanum tuberosum PGSC0003DMG400009665 I 0.876
SapurV1A.1275s0070 Salix purpurea SapurV1A.1275s0070 I 0.876
POPTR_0003s11250 Populus trichocarpa POPTR_0003s11250 I 0.876
28200.m000189 Ricinus communis 28200.m000189 I 0.876
BGIOSGA015018 Oryza indica BGIOSGA015018 I 0.875
GRMZM2G099144 Zea mays GRMZM2G099144 I 0.875
mgf025569m Mimulus guttatus mgf025569m I 0.875
ONIVA04G12040 Oryza nivara ONIVA04G12040 I 0.875
Bo2g095440 Brassica oleracea Bo2g095440 I 0.875
OLONG_020428 Oryza longistaminata OLONG_020428 I 0.875
BGIOSGA034998 Oryza indica BGIOSGA034998 I 0.875
OBART04G13830 Oryza barthii OBART04G13830 I 0.875
GRMZM2G155816 Zea mays GRMZM2G155816 I 0.874
GLYMA15G42050 Glycine max GLYMA15G42050 I 0.873
GSMUA_Achr11G17510_001 Musa acuminata GSMUA_Achr11G17510_001 I 0.873
MTR_4g035590 Medicago truncatula MTR_4g035590 I 0.872
Sb06g017720 Sorghum bicolor Sb06g017720 I 0.872
OB04G21050 Oryza brachyantha OB04G21050 I 0.872
OGLUM04G13590 Oryza glumaepatula OGLUM04G13590 I 0.872
Sb10g020850 Sorghum bicolor Sb10g020850 I 0.872
Ca_15792 Cicer arietinum Ca_15792 I 0.872
Si012319m.g Setaria italica Si012319m.g I 0.872
mg017416m Mimulus guttatus mg017416m I 0.872
Pavir.J07268 Panicum virgatum Pavir.J07268 I 0.872
Pavir.Gb01599 Panicum virgatum Pavir.Gb01599 I 0.872
Lus10024601.g Linum usitatissimum Lus10024601.g I 0.871
ORUFI04G15090 Oryza rufipogon ORUFI04G15090 I 0.871
SapurV1A.0634s0120 Salix purpurea SapurV1A.0634s0120 I 0.871
cassava46384.m1 Manihot esculenta cassava46384.m1 I 0.871