CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Thhalv10021297m.g
(
Eutrema salsugineum
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02365 (NAM)
IPR003441
Thhalv10021297m.g
T299283_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Thhalv10021297m
NAC/NAM
19
143
PPGFRFHPRDDELVCDYLMKRTVRSLYQPVVLIEVDLNKCEPWDIPRMARVGGKDWYFYSQKDRKYATGQRTNRATATGYWKATGKDRAIQRNGSLVGMRKTLVFYRGRAPKGRKTEWVMHEFRL
Links
Other
NAC/NAM
family TFs
Other
Eutrema salsugineum
TFs
44 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bra034713
Brassica rapa
Bra034713
N
0.992
Bo5g132990
Brassica oleracea
Bo5g132990
N
0.991
scaffold_301478.1
Arabidopsis lyrata
scaffold_301478.1
N
0.989
Bra001480
Brassica rapa
Bra001480
N
0.988
Bo3g065240
Brassica oleracea
Bo3g065240
N
0.988
AT3G12977
Arabidopsis thaliana
AT3G12977
N
0.987
Bostr.3640s0073
Boechera stricta
Bostr.3640s0073
N
0.983
NAC1
Arabidopsis lyrata
Al_scaffold_0001_4992
N
0.965
Bo3g185760
Brassica oleracea
Bo3g185760
N
0.958
Bra030820
Brassica rapa
Bra030820
N
0.958
NAC021
Arabidopsis thaliana
AT1G56010
N
0.955
Thhalv10011659m.g
Eutrema salsugineum
Thhalv10011659m.g
N
0.954
PGSC0003DMG400022134
Solanum tuberosum
PGSC0003DMG400022134
N
0.950
Ciclev10021117m.g
Citrus clementina
Ciclev10021117m.g
N
0.949
SapurV1A.0085s0410
Salix purpurea
SapurV1A.0085s0410
N
0.949
29650.m000275
Ricinus communis
29650.m000275
N
0.935
OPUNC03G00610
Oryza punctata
OPUNC03G00610
N
0.929
Cla023574
Citrullus lanatus
Cla023574
N
0.924
Eucgr.F01449
Eucalyptus grandis
Eucgr.F01449
N
0.920
TCM_032479
Theobroma cacao
TCM_032479
N
0.918
GLYMA08G18470
Glycine max
GLYMA08G18470
N
0.915
OB03G10720
Oryza brachyantha
OB03G10720
N
0.906
OLONG_025732
Oryza longistaminata
OLONG_025732
I
0.905
cassava27052.m1
Manihot esculenta
cassava27052.m1
I
0.902
BGIOSGA011685
Oryza indica
BGIOSGA011685
I
0.900
Sb10g027100
Sorghum bicolor
Sb10g027100
N
0.899
ORGLA03G0005100
Oryza glaberrima
ORGLA03G0005100
I
0.897
OGLUM03G00640
Oryza glumaepatula
OGLUM03G00640
I
0.897
OBART03G00700
Oryza barthii
OBART03G00700
I
0.897
MDP0000298182
Malus domestica
MDP0000298182
N
0.893
OMERI02G24100
Oryza meridionalis
OMERI02G24100
N
0.886
ONIVA02G26880
Oryza nivara
ONIVA02G26880
N
0.886
OGLUM02G24950
Oryza glumaepatula
OGLUM02G24950
N
0.886
LPERR02G20100
Leersia perrieri
LPERR02G20100
N
0.886
ORUFI02G25930
Oryza rufipogon
ORUFI02G25930
N
0.884
OLONG_000596
Oryza longistaminata
OLONG_000596
N
0.883
PRUPE_ppa008801mg
Prunus persica
PRUPE_ppa008801mg
N
0.882
evm.TU.supercontig_165.12
Carica papaya
evm.TU.supercontig_165.12
N
0.882
OBART02G24560
Oryza barthii
OBART02G24560
N
0.880
Ca_13537
Cicer arietinum
Ca_13537
N
0.880
Carubv10011081m.g
Capsella rubella
Carubv10011081m.g
N
0.872
Cagra.6372s0006
Capsella grandiflora
Cagra.6372s0006
N
0.872
OB02G31950
Oryza brachyantha
OB02G31950
N
0.871
OBART08G05780
Oryza barthii
OBART08G05780
N
0.027