CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Sb10g027100
(
Sorghum bicolor
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02365 (NAM)
IPR003441
Sb10g027100
T295604_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Sb10g027100.1
NAC/NAM
14
149
PPGFRFHPRDDELVLDYLAKKLAGGAGVGGGPLVVSIYGCPAMVDVDLNKCEPWDLPEIACIGGKEWYFYSLRDRKYATGQRTNRATDSGYWKATGKDRPISRKGLLVGMRKTLVFYQGRAPKGKKTEWVMHEFRM
Links
Other
NAC/NAM
family TFs
Other
Sorghum bicolor
TFs
85 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GRMZM2G063522
Zea mays
GRMZM2G063522
I
0.986
Pavir.Db00380
Panicum virgatum
Pavir.Db00380
N
0.986
BRADI1G32660
Brachypodium distachyon
BRADI1G32660
I
0.985
Si006975m.g
Setaria italica
Si006975m.g
N
0.983
Pavir.J36955
Panicum virgatum
Pavir.J36955
I
0.983
OLONG_010248
Oryza longistaminata
OLONG_010248
N
0.980
GLYMA08G18470
Glycine max
GLYMA08G18470
N
0.979
Pavir.Gb00488
Panicum virgatum
Pavir.Gb00488
N
0.978
MLOC_25708
Hordeum vulgare
MLOC_25708
N
0.973
LPERR06G20430
Leersia perrieri
LPERR06G20430
N
0.973
Pavir.Ga00022
Panicum virgatum
Pavir.Ga00022
I
0.973
Cla023574
Citrullus lanatus
Cla023574
N
0.973
Si010680m.g
Setaria italica
Si010680m.g
I
0.972
Sb07g005610
Sorghum bicolor
Sb07g005610
I
0.970
29650.m000275
Ricinus communis
29650.m000275
N
0.970
GRMZM2G167018
Zea mays
GRMZM2G167018
I
0.968
Traes_7AL_BE3253C8F
Triticum aestivum
Traes_7AL_BE3253C8F
N
0.967
TRIUR3_03895
Triticum urartu
TRIUR3_03895
N
0.967
MLOC_53744
Hordeum vulgare
MLOC_53744
N
0.966
F775_26920
Aegilops tauschii
F775_26920
N
0.965
TRIUR3_29250
Triticum urartu
TRIUR3_29250
I
0.962
Traes_7DL_BDD45DB24
Triticum aestivum
Traes_7DL_BDD45DB24
I
0.962
F775_30297
Aegilops tauschii
F775_30297
I
0.962
GSMUA_Achr9G10210_001
Musa acuminata
GSMUA_Achr9G10210_001
N
0.960
OPUNC06G22270
Oryza punctata
OPUNC06G22270
N
0.957
cassava27052.m1
Manihot esculenta
cassava27052.m1
I
0.956
OMERI06G24740
Oryza meridionalis
OMERI06G24740
N
0.954
OGLUM06G25850
Oryza glumaepatula
OGLUM06G25850
N
0.954
BGIOSGA023457
Oryza indica
BGIOSGA023457
N
0.954
OBART06G24550
Oryza barthii
OBART06G24550
N
0.954
ORGLA06G0205600
Oryza glaberrima
ORGLA06G0205600
N
0.954
OS06G0675600
Oryza sativa
OS06G0675600
N
0.954
ORUFI06G26420
Oryza rufipogon
ORUFI06G26420
N
0.954
ONIVA02G35380
Oryza nivara
ONIVA02G35380
N
0.954
GSMUA_Achr3G23360_001
Musa acuminata
GSMUA_Achr3G23360_001
N
0.947
PGSC0003DMG400022134
Solanum tuberosum
PGSC0003DMG400022134
N
0.946
Ciclev10021117m.g
Citrus clementina
Ciclev10021117m.g
N
0.940
PRUPE_ppa008801mg
Prunus persica
PRUPE_ppa008801mg
N
0.938
NAC1
Arabidopsis lyrata
Al_scaffold_0001_4992
N
0.937
Bra030820
Brassica rapa
Bra030820
N
0.936
Bo3g185760
Brassica oleracea
Bo3g185760
N
0.936
MTR_2g064470
Medicago truncatula
MTR_2g064470
N
0.934
NAC021
Arabidopsis thaliana
AT1G56010
N
0.934
GSMUA_Achr6G30050_001
Musa acuminata
GSMUA_Achr6G30050_001
N
0.934
gene10469-v1.0-hybrid
Fragaria vesca
gene10469-v1.0-hybrid
N
0.934
Ca_13537
Cicer arietinum
Ca_13537
N
0.930
PK23481.1
Cannabis sativa
PK23481.1
N
0.929
OLONG_025732
Oryza longistaminata
OLONG_025732
I
0.929
Pavir.Fb00532
Panicum virgatum
Pavir.Fb00532
N
0.928
chr3.CM0279.430.nd
Lotus japonicus
chr3.CM0279.430.nd
N
0.927
OBART03G00700
Oryza barthii
OBART03G00700
I
0.926
OGLUM03G00640
Oryza glumaepatula
OGLUM03G00640
I
0.926
BGIOSGA011685
Oryza indica
BGIOSGA011685
I
0.926
scaffold_301478.1
Arabidopsis lyrata
scaffold_301478.1
N
0.926
ORGLA03G0005100
Oryza glaberrima
ORGLA03G0005100
I
0.926
Thhalv10011659m.g
Eutrema salsugineum
Thhalv10011659m.g
N
0.925
Eucgr.F01449
Eucalyptus grandis
Eucgr.F01449
N
0.923
TRIUR3_34020
Triticum urartu
TRIUR3_34020
N
0.918
AT3G12977
Arabidopsis thaliana
AT3G12977
N
0.918
Traes_2AL_CA89051FD
Triticum aestivum
Traes_2AL_CA89051FD
N
0.918
Si014180m.g
Setaria italica
Si014180m.g
N
0.916
SapurV1A.0085s0410
Salix purpurea
SapurV1A.0085s0410
N
0.914
evm.TU.supercontig_165.12
Carica papaya
evm.TU.supercontig_165.12
N
0.913
Bostr.3640s0073
Boechera stricta
Bostr.3640s0073
N
0.908
OPUNC03G00610
Oryza punctata
OPUNC03G00610
N
0.901
Thhalv10021297m.g
Eutrema salsugineum
Thhalv10021297m.g
N
0.899
Bra034713
Brassica rapa
Bra034713
N
0.898
Pm011234
Prunus mume
Pm011234
N
0.895
Bo5g132990
Brassica oleracea
Bo5g132990
N
0.892
SapurV1A.0284s0040
Salix purpurea
SapurV1A.0284s0040
N
0.891
OBART02G24560
Oryza barthii
OBART02G24560
N
0.891
GLYMA15G40510
Glycine max
GLYMA15G40510
N
0.890
Lus10015389.g
Linum usitatissimum
Lus10015389.g
I
0.889
OB02G31950
Oryza brachyantha
OB02G31950
N
0.885
OMERI02G24100
Oryza meridionalis
OMERI02G24100
N
0.884
OGLUM02G24950
Oryza glumaepatula
OGLUM02G24950
N
0.884
ONIVA02G26880
Oryza nivara
ONIVA02G26880
N
0.884
MDP0000298182
Malus domestica
MDP0000298182
N
0.883
ORUFI02G25930
Oryza rufipogon
ORUFI02G25930
N
0.883
OLONG_000596
Oryza longistaminata
OLONG_000596
N
0.882
Sb06g028800
Sorghum bicolor
Sb06g028800
N
0.880
BGIOSGA007201
Oryza indica
BGIOSGA007201
N
0.879
BRADI3G17287
Brachypodium distachyon
BRADI3G17287
N
0.878
Bo3g065240
Brassica oleracea
Bo3g065240
N
0.874
Bra001480
Brassica rapa
Bra001480
N
0.874