CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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chr3.CM0279.430.nd
(
Lotus japonicus
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02365 (NAM)
IPR003441
chr3.CM0279.430.nd
T299399_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
chr3.CM0279.430.nd
NAC/NAM
12
134
PPGFRFHPRDEELVCDYLMKKVTHSDSLLMIDVDLNKCEPWDIPATACVGGKEWYFYTQRDRKYATGLRTNRATSSGYWKATGKDRAIHRRGTLVGMRKTLVFYQGRAPKGRKTEWVMHEFAL
Links
Other
NAC/NAM
family TFs
Other
Lotus japonicus
TFs
62 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Ca_13537
Cicer arietinum
Ca_13537
N
0.996
MTR_2g064470
Medicago truncatula
MTR_2g064470
N
0.996
GLYMA15G40510
Glycine max
GLYMA15G40510
N
0.993
Eucgr.F01449
Eucalyptus grandis
Eucgr.F01449
N
0.992
SapurV1A.0284s0040
Salix purpurea
SapurV1A.0284s0040
N
0.992
gene10469-v1.0-hybrid
Fragaria vesca
gene10469-v1.0-hybrid
N
0.990
PRUPE_ppa008801mg
Prunus persica
PRUPE_ppa008801mg
N
0.990
MDP0000298182
Malus domestica
MDP0000298182
N
0.990
PK23481.1
Cannabis sativa
PK23481.1
N
0.984
Pm011234
Prunus mume
Pm011234
N
0.983
TCM_032479
Theobroma cacao
TCM_032479
N
0.983
GLYMA08G18470
Glycine max
GLYMA08G18470
N
0.981
29650.m000275
Ricinus communis
29650.m000275
N
0.970
GSMUA_Achr6G30050_001
Musa acuminata
GSMUA_Achr6G30050_001
N
0.966
GSMUA_Achr3G23360_001
Musa acuminata
GSMUA_Achr3G23360_001
N
0.965
GSMUA_Achr9G10210_001
Musa acuminata
GSMUA_Achr9G10210_001
N
0.961
PGSC0003DMG400022134
Solanum tuberosum
PGSC0003DMG400022134
N
0.957
Ciclev10021117m.g
Citrus clementina
Ciclev10021117m.g
N
0.947
Cla023574
Citrullus lanatus
Cla023574
N
0.947
cassava27052.m1
Manihot esculenta
cassava27052.m1
I
0.945
GSMUA_AchrUn_randomG17260_001
Musa acuminata
GSMUA_AchrUn_randomG17260_001
N
0.940
Traes_7DL_BDD45DB24
Triticum aestivum
Traes_7DL_BDD45DB24
I
0.939
F775_30297
Aegilops tauschii
F775_30297
I
0.939
TRIUR3_29250
Triticum urartu
TRIUR3_29250
I
0.939
MDP0000216357
Malus domestica
MDP0000216357
N
0.938
evm.TU.supercontig_10.25
Carica papaya
evm.TU.supercontig_10.25
N
0.938
GSMUA_Achr11G22760_001
Musa acuminata
GSMUA_Achr11G22760_001
N
0.937
NAC1
Arabidopsis lyrata
Al_scaffold_0001_4992
N
0.928
Sb10g027100
Sorghum bicolor
Sb10g027100
N
0.927
GSMUA_Achr6G36550_001
Musa acuminata
GSMUA_Achr6G36550_001
N
0.923
Sb07g005610
Sorghum bicolor
Sb07g005610
I
0.921
OMERI03G00460
Oryza meridionalis
OMERI03G00460
N
0.919
Thhalv10011659m.g
Eutrema salsugineum
Thhalv10011659m.g
N
0.917
AMTR_s00067p00064350
Amborella trichopoda
AMTR_s00067p00064350
N
0.917
GRMZM2G167018
Zea mays
GRMZM2G167018
I
0.917
AT3G12977
Arabidopsis thaliana
AT3G12977
N
0.912
scaffold_301478.1
Arabidopsis lyrata
scaffold_301478.1
N
0.912
Bra030820
Brassica rapa
Bra030820
N
0.912
NAC021
Arabidopsis thaliana
AT1G56010
N
0.910
F775_26920
Aegilops tauschii
F775_26920
N
0.907
Bo3g185760
Brassica oleracea
Bo3g185760
N
0.905
Si006975m.g
Setaria italica
Si006975m.g
N
0.903
GRMZM2G063522
Zea mays
GRMZM2G063522
I
0.902
LPERR06G20430
Leersia perrieri
LPERR06G20430
N
0.902
Pavir.Fa02065
Panicum virgatum
Pavir.Fa02065
N
0.899
Traes_7AL_BE3253C8F
Triticum aestivum
Traes_7AL_BE3253C8F
N
0.899
TRIUR3_03895
Triticum urartu
TRIUR3_03895
N
0.899
MLOC_53744
Hordeum vulgare
MLOC_53744
N
0.895
VIT_19s0027g00230
Vitis vinifera
VIT_19s0027g00230
N
0.893
SapurV1A.0085s0410
Salix purpurea
SapurV1A.0085s0410
N
0.893
OLONG_010248
Oryza longistaminata
OLONG_010248
N
0.892
Pavir.Db00380
Panicum virgatum
Pavir.Db00380
N
0.891
Pavir.J36955
Panicum virgatum
Pavir.J36955
I
0.890
Pavir.Fb00532
Panicum virgatum
Pavir.Fb00532
N
0.884
Si014180m.g
Setaria italica
Si014180m.g
N
0.881
TRIUR3_17688
Triticum urartu
TRIUR3_17688
N
0.881
BRADI1G32660
Brachypodium distachyon
BRADI1G32660
I
0.877
Cagra.6372s0006
Capsella grandiflora
Cagra.6372s0006
N
0.875
Carubv10011081m.g
Capsella rubella
Carubv10011081m.g
N
0.875
MLOC_25708
Hordeum vulgare
MLOC_25708
N
0.874
Bra034713
Brassica rapa
Bra034713
N
0.872
POPTR_0002s15530
Populus trichocarpa
POPTR_0002s15530
N
0.871