CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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29650.m000275
(
Ricinus communis
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02365 (NAM)
IPR003441
29650.m000275
T296742_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
29650.m000275
NAC/NAM
12
134
PPGFRFHPRDEELVCDYLMKKITHSDSLLLIEVDLNKSEPWDIPETACVGGKEWYFYSQRDRKYATGVRTNRATASGYWKATGKDRPVLRKGTLVGMRKTLVFYQGRAPKGRKSDWVMHEFRL
Links
Other
NAC/NAM
family TFs
Other
Ricinus communis
TFs
70 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GLYMA08G18470
Glycine max
GLYMA08G18470
N
0.992
Cla023574
Citrullus lanatus
Cla023574
N
0.988
cassava27052.m1
Manihot esculenta
cassava27052.m1
I
0.984
PGSC0003DMG400022134
Solanum tuberosum
PGSC0003DMG400022134
N
0.984
gene10469-v1.0-hybrid
Fragaria vesca
gene10469-v1.0-hybrid
N
0.983
PRUPE_ppa008801mg
Prunus persica
PRUPE_ppa008801mg
N
0.982
PK23481.1
Cannabis sativa
PK23481.1
N
0.979
SapurV1A.0284s0040
Salix purpurea
SapurV1A.0284s0040
N
0.977
MDP0000298182
Malus domestica
MDP0000298182
N
0.975
Eucgr.F01449
Eucalyptus grandis
Eucgr.F01449
N
0.972
Ciclev10021117m.g
Citrus clementina
Ciclev10021117m.g
N
0.971
chr3.CM0279.430.nd
Lotus japonicus
chr3.CM0279.430.nd
N
0.970
Sb10g027100
Sorghum bicolor
Sb10g027100
N
0.970
Pm011234
Prunus mume
Pm011234
N
0.967
MTR_2g064470
Medicago truncatula
MTR_2g064470
N
0.966
Ca_13537
Cicer arietinum
Ca_13537
N
0.966
GLYMA15G40510
Glycine max
GLYMA15G40510
N
0.966
SapurV1A.0085s0410
Salix purpurea
SapurV1A.0085s0410
N
0.964
NAC021
Arabidopsis thaliana
AT1G56010
N
0.963
NAC1
Arabidopsis lyrata
Al_scaffold_0001_4992
N
0.963
Bra030820
Brassica rapa
Bra030820
N
0.955
Thhalv10011659m.g
Eutrema salsugineum
Thhalv10011659m.g
N
0.953
Bo3g185760
Brassica oleracea
Bo3g185760
N
0.951
VIT_19s0027g00230
Vitis vinifera
VIT_19s0027g00230
N
0.945
TCM_032479
Theobroma cacao
TCM_032479
N
0.941
Bra034713
Brassica rapa
Bra034713
N
0.939
OLONG_025732
Oryza longistaminata
OLONG_025732
I
0.938
GRMZM2G063522
Zea mays
GRMZM2G063522
I
0.936
BGIOSGA011685
Oryza indica
BGIOSGA011685
I
0.936
Bo5g132990
Brassica oleracea
Bo5g132990
N
0.936
Pavir.J36955
Panicum virgatum
Pavir.J36955
I
0.935
Thhalv10021297m.g
Eutrema salsugineum
Thhalv10021297m.g
N
0.935
ORGLA03G0005100
Oryza glaberrima
ORGLA03G0005100
I
0.934
OGLUM03G00640
Oryza glumaepatula
OGLUM03G00640
I
0.934
OBART03G00700
Oryza barthii
OBART03G00700
I
0.934
BRADI1G32660
Brachypodium distachyon
BRADI1G32660
I
0.929
Bo3g065240
Brassica oleracea
Bo3g065240
N
0.928
Bra001480
Brassica rapa
Bra001480
N
0.928
OBART02G24560
Oryza barthii
OBART02G24560
N
0.927
OMERI02G24100
Oryza meridionalis
OMERI02G24100
N
0.927
OGLUM02G24950
Oryza glumaepatula
OGLUM02G24950
N
0.927
ONIVA02G26880
Oryza nivara
ONIVA02G26880
N
0.927
ORUFI02G25930
Oryza rufipogon
ORUFI02G25930
N
0.926
OLONG_000596
Oryza longistaminata
OLONG_000596
N
0.924
OB02G31950
Oryza brachyantha
OB02G31950
N
0.923
Traes_7DL_BDD45DB24
Triticum aestivum
Traes_7DL_BDD45DB24
I
0.922
F775_30297
Aegilops tauschii
F775_30297
I
0.922
TRIUR3_29250
Triticum urartu
TRIUR3_29250
I
0.922
OPUNC03G00610
Oryza punctata
OPUNC03G00610
N
0.920
scaffold_301478.1
Arabidopsis lyrata
scaffold_301478.1
N
0.920
evm.TU.supercontig_165.12
Carica papaya
evm.TU.supercontig_165.12
N
0.919
AT3G12977
Arabidopsis thaliana
AT3G12977
N
0.919
LPERR02G20100
Leersia perrieri
LPERR02G20100
N
0.906
Si006975m.g
Setaria italica
Si006975m.g
N
0.906
Sb07g005610
Sorghum bicolor
Sb07g005610
I
0.900
OLONG_010248
Oryza longistaminata
OLONG_010248
N
0.898
Bostr.3640s0073
Boechera stricta
Bostr.3640s0073
N
0.897
BGIOSGA007201
Oryza indica
BGIOSGA007201
N
0.896
Pavir.Db00380
Panicum virgatum
Pavir.Db00380
N
0.894
GRMZM2G167018
Zea mays
GRMZM2G167018
I
0.891
Pavir.Gb00488
Panicum virgatum
Pavir.Gb00488
N
0.889
OB03G10720
Oryza brachyantha
OB03G10720
N
0.886
MLOC_25708
Hordeum vulgare
MLOC_25708
N
0.881
Si010680m.g
Setaria italica
Si010680m.g
I
0.881
evm.TU.supercontig_10.25
Carica papaya
evm.TU.supercontig_10.25
N
0.876
OPUNC08G18240
Oryza punctata
OPUNC08G18240
I
0.875
OGLUM08G21360
Oryza glumaepatula
OGLUM08G21360
I
0.872
OS08G0511200
Oryza sativa
OS08G0511200
I
0.872
ORUFI08G22550
Oryza rufipogon
ORUFI08G22550
I
0.872
ORGLA08G0177600
Oryza glaberrima
ORGLA08G0177600
I
0.872