CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Thhalv10011659m.g
(
Eutrema salsugineum
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02365 (NAM)
IPR003441
Thhalv10011659m.g
T299235_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Thhalv10011659m
NAC/NAM
21
146
PPGFRFHPKDDELVCDYLMRRSHHPSPPPPLFLIHVDLNKCEPWDIPKMACVGGKDWYFYSQRDRKYATGLRTNRATATGYWKATGKDRAILRKGKLVGMRKTLVFYQGRAPRGRKTDWVMHEFRL
Links
Other
NAC/NAM
family TFs
Other
Eutrema salsugineum
TFs
32 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
NAC1
Arabidopsis lyrata
Al_scaffold_0001_4992
N
0.992
NAC021
Arabidopsis thaliana
AT1G56010
N
0.990
Bra030820
Brassica rapa
Bra030820
N
0.985
Bo3g185760
Brassica oleracea
Bo3g185760
N
0.985
Ciclev10021117m.g
Citrus clementina
Ciclev10021117m.g
N
0.965
PGSC0003DMG400022134
Solanum tuberosum
PGSC0003DMG400022134
N
0.955
scaffold_301478.1
Arabidopsis lyrata
scaffold_301478.1
N
0.954
Thhalv10021297m.g
Eutrema salsugineum
Thhalv10021297m.g
N
0.954
29650.m000275
Ricinus communis
29650.m000275
N
0.953
Carubv10011081m.g
Capsella rubella
Carubv10011081m.g
N
0.949
GLYMA08G18470
Glycine max
GLYMA08G18470
N
0.949
Cagra.6372s0006
Capsella grandiflora
Cagra.6372s0006
N
0.949
Bra034713
Brassica rapa
Bra034713
N
0.948
AT3G12977
Arabidopsis thaliana
AT3G12977
N
0.946
Bo5g132990
Brassica oleracea
Bo5g132990
N
0.944
Eucgr.F01449
Eucalyptus grandis
Eucgr.F01449
N
0.944
Cla023574
Citrullus lanatus
Cla023574
N
0.939
cassava27052.m1
Manihot esculenta
cassava27052.m1
I
0.929
Sb10g027100
Sorghum bicolor
Sb10g027100
N
0.925
Bo3g065240
Brassica oleracea
Bo3g065240
N
0.923
Ca_13537
Cicer arietinum
Ca_13537
N
0.923
Bra001480
Brassica rapa
Bra001480
N
0.923
GLYMA15G40510
Glycine max
GLYMA15G40510
N
0.922
chr3.CM0279.430.nd
Lotus japonicus
chr3.CM0279.430.nd
N
0.917
Bostr.3640s0073
Boechera stricta
Bostr.3640s0073
N
0.916
MTR_2g064470
Medicago truncatula
MTR_2g064470
N
0.909
MDP0000298182
Malus domestica
MDP0000298182
N
0.904
SapurV1A.0085s0410
Salix purpurea
SapurV1A.0085s0410
N
0.903
SapurV1A.0284s0040
Salix purpurea
SapurV1A.0284s0040
N
0.897
PRUPE_ppa008801mg
Prunus persica
PRUPE_ppa008801mg
N
0.895
gene10469-v1.0-hybrid
Fragaria vesca
gene10469-v1.0-hybrid
N
0.884
Sb07g005610
Sorghum bicolor
Sb07g005610
I
0.872