Lus10003126.g (Linum usitatissimum)
SBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03110 (SBP) IPR004333 Lus10003126.g T323523_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Lus10003126 SBP 25 99

Links

Other SBP family TFs
Other Linum usitatissimum TFs

111 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Lus10011348.g Linum usitatissimum Lus10011348.g I 0.984
Gorai.012G185700 Gossypium raimondii Gorai.012G185700 N 0.956
Si013747m.g Setaria italica Si013747m.g N 0.954
Pavir.J28847 Panicum virgatum Pavir.J28847 N 0.954
Pavir.Fb00717 Panicum virgatum Pavir.Fb00717 N 0.954
Pavir.Ba01534 Panicum virgatum Pavir.Ba01534 N 0.949
Pavir.J30793 Panicum virgatum Pavir.J30793 N 0.949
cassava42933.valid.m1 Manihot esculenta cassava42933.valid.m1 I 0.941
Eucgr.B03518 Eucalyptus grandis Eucgr.B03518 I 0.940
Cucsa.349620 Cucumis sativus Cucsa.349620 I 0.936
Cla001541 Citrullus lanatus Cla001541 I 0.936
PGSC0003DMG400021902 Solanum tuberosum PGSC0003DMG400021902 I 0.934
Solyc05g015840.2 Solanum lycopersicum Solyc05g015840.2 I 0.934
Aquca_002_00889 Aquilegia coerulea Aquca_002_00889 I 0.933
mgf003797m Mimulus guttatus mgf003797m I 0.933
mgf010913m Mimulus guttatus mgf010913m I 0.933
cassava43385.valid.m1 Manihot esculenta cassava43385.valid.m1 I 0.932
cassava6548.valid.m1 Manihot esculenta cassava6548.valid.m1 I 0.929
cassava7440.valid.m1 Manihot esculenta cassava7440.valid.m1 I 0.928
GLYMA04G32002 Glycine max GLYMA04G32002 I 0.927
Ca_19449 Cicer arietinum Ca_19449 I 0.927
GLYMA0005S50 Glycine max GLYMA0005S50 I 0.927
Cucsa.198630 Cucumis sativus Cucsa.198630 I 0.927
GLYMA17G08840 Glycine max GLYMA17G08840 I 0.927
MTR_4g109770 Medicago truncatula MTR_4g109770 I 0.927
MTR_2g461920 Medicago truncatula MTR_2g461920 I 0.927
MDP0000146640 Malus domestica MDP0000146640 I 0.926
MDP0000778465 Malus domestica MDP0000778465 I 0.926
PGSC0003DMG400023260 Solanum tuberosum PGSC0003DMG400023260 I 0.925
Bo3g042890 Brassica oleracea Bo3g042890 I 0.925
AMTR_s00047p00197010 Amborella trichopoda AMTR_s00047p00197010 I 0.925
Solyc12g038520.1 Solanum lycopersicum Solyc12g038520.1 I 0.925
30138.m003942 Ricinus communis 30138.m003942 I 0.925
Solyc03g114850.2 Solanum lycopersicum Solyc03g114850.2 I 0.924
Cla018827 Citrullus lanatus Cla018827 I 0.924
TCM_014330 Theobroma cacao TCM_014330 I 0.924
PGSC0003DMG400024527 Solanum tuberosum PGSC0003DMG400024527 I 0.924
Cucsa.113410 Cucumis sativus Cucsa.113410 I 0.923
VIT_17s0000g05020 Vitis vinifera VIT_17s0000g05020 I 0.923
Cla019331 Citrullus lanatus Cla019331 I 0.923
30174.m009082 Ricinus communis 30174.m009082 I 0.923
29929.m004627 Ricinus communis 29929.m004627 I 0.923
Lus10021141.g Linum usitatissimum Lus10021141.g I 0.923
SapurV1A.0329s0040 Salix purpurea SapurV1A.0329s0040 I 0.923
SapurV1A.0072s0340 Salix purpurea SapurV1A.0072s0340 I 0.923
POPTR_0010s16400 Populus trichocarpa POPTR_0010s16400 I 0.923
evm.TU.supercontig_2783.1 Carica papaya evm.TU.supercontig_2783.1 I 0.922
POPTR_0015s07140 Populus trichocarpa POPTR_0015s07140 I 0.922
Lus10015764.g Linum usitatissimum Lus10015764.g I 0.922
cassava39122.m1 Manihot esculenta cassava39122.m1 I 0.921
GSMUA_Achr2G06150_001 Musa acuminata GSMUA_Achr2G06150_001 I 0.921
VIT_01s0011g00130 Vitis vinifera VIT_01s0011g00130 I 0.920
Lus10007984.g Linum usitatissimum Lus10007984.g I 0.919
LPERR08G18310 Leersia perrieri LPERR08G18310 I 0.918
SPL19 Oryza sativa OS11G0496600 I 0.918
LPERR11G11330 Leersia perrieri LPERR11G11330 I 0.918
ORGLA11G0121600 Oryza glaberrima ORGLA11G0121600 I 0.918
POPTR_0008s09750 Populus trichocarpa POPTR_0008s09750 I 0.917
PK17790.1 Cannabis sativa PK17790.1 I 0.916
BRADI4G34667 Brachypodium distachyon BRADI4G34667 I 0.916
GRMZM2G061734 Zea mays GRMZM2G061734 I 0.916
Sb02g029300 Sorghum bicolor Sb02g029300 I 0.916
GSMUA_AchrUn_randomG08380_001 Musa acuminata GSMUA_AchrUn_randomG08380_001 I 0.916
OMERI06G13610 Oryza meridionalis OMERI06G13610 I 0.914
orange1.1g021420m.g Citrus sinensis orange1.1g021420m.g I 0.914
OGLUM08G22810 Oryza glumaepatula OGLUM08G22810 I 0.914
SPL16 Oryza sativa OS08G0531600 I 0.914
Gorai.002G181700 Gossypium raimondii Gorai.002G181700 I 0.913
SapurV1A.0173s0270 Salix purpurea SapurV1A.0173s0270 I 0.911
GSMUA_Achr9G29330_001 Musa acuminata GSMUA_Achr9G29330_001 I 0.908
ORGLA08G0230100 Oryza glaberrima ORGLA08G0230100 I 0.907
Aquca_011_00114 Aquilegia coerulea Aquca_011_00114 I 0.906
TCM_008671 Theobroma cacao TCM_008671 I 0.905
Gorai.005G164600 Gossypium raimondii Gorai.005G164600 I 0.905
Gorai.008G166000 Gossypium raimondii Gorai.008G166000 I 0.905
POPTR_0003s16780 Populus trichocarpa POPTR_0003s16780 I 0.905
BRADI3G41250 Brachypodium distachyon BRADI3G41250 I 0.905
GSMUA_Achr6G06030_001 Musa acuminata GSMUA_Achr6G06030_001 I 0.904
GSMUA_Achr6G27520_001 Musa acuminata GSMUA_Achr6G27520_001 I 0.903
OMERI11G11920 Oryza meridionalis OMERI11G11920 I 0.902
MDP0000142582 Malus domestica MDP0000142582 N 0.900
Pavir.J02262 Panicum virgatum Pavir.J02262 I 0.899
Pavir.Ea03909 Panicum virgatum Pavir.Ea03909 I 0.899
Si001804m.g Setaria italica Si001804m.g I 0.899
OPUNC08G19660 Oryza punctata OPUNC08G19660 I 0.898
Ciclev10032171m.g Citrus clementina Ciclev10032171m.g I 0.897
GSMUA_AchrUn_randomG21900_001 Musa acuminata GSMUA_AchrUn_randomG21900_001 I 0.895
LPERR09G11920 Leersia perrieri LPERR09G11920 I 0.894
ONIVA09G16860 Oryza nivara ONIVA09G16860 I 0.894
OBART09G15750 Oryza barthii OBART09G15750 I 0.894
SPL18 Oryza sativa OS09G0507100 I 0.894
SapurV1A.0176s0470 Salix purpurea SapurV1A.0176s0470 I 0.894
OGLUM09G16320 Oryza glumaepatula OGLUM09G16320 I 0.894
ONIVA08G24550 Oryza nivara ONIVA08G24550 I 0.893
POPTR_0001s13630 Populus trichocarpa POPTR_0001s13630 I 0.892
SapurV1A.1460s0110 Salix purpurea SapurV1A.1460s0110 I 0.892
VIT_01s0010g03910 Vitis vinifera VIT_01s0010g03910 I 0.892
evm.TU.supercontig_1141.2 Carica papaya evm.TU.supercontig_1141.2 I 0.891
TCM_014668 Theobroma cacao TCM_014668 I 0.891
gene26117-v1.0-hybrid Fragaria vesca gene26117-v1.0-hybrid I 0.890
Eucgr.B00631 Eucalyptus grandis Eucgr.B00631 I 0.890
PRUPE_ppa003644mg Prunus persica PRUPE_ppa003644mg I 0.890
Gorai.003G102800 Gossypium raimondii Gorai.003G102800 I 0.890
Eucgr.K02708 Eucalyptus grandis Eucgr.K02708 I 0.889
Lus10000643.g Linum usitatissimum Lus10000643.g I 0.889
orange1.1g016971m.g Citrus sinensis orange1.1g016971m.g I 0.889
Ciclev10031834m.g Citrus clementina Ciclev10031834m.g I 0.889
Pm025028 Prunus mume Pm025028 I 0.888
GLYMA08G01450 Glycine max GLYMA08G01450 I 0.888
MDP0000589558 Malus domestica MDP0000589558 I 0.887
Lus10036812.g Linum usitatissimum Lus10036812.g I 0.887