LPERR08G18310 (Leersia perrieri)
SBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03110 (SBP) IPR004333 LPERR08G18310 T322706_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SPL13A
M07265_2.00 		Arabidopsis thaliana
DNYGTACGGWH
DWCCGTACRNH		 Dap-seq
OMalley et al.(2016)
SPL13_col_a 		0.917 0.733
For this family, TFs with SR scores > 0.885 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
LPERR08G18310.1 SBP 116 190

Links

Other SBP family TFs
Other Leersia perrieri TFs

166 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
OMERI06G13610 Oryza meridionalis OMERI06G13610 I 0.981
OGLUM08G22810 Oryza glumaepatula OGLUM08G22810 I 0.981
SPL16 Oryza sativa OS08G0531600 I 0.981
BRADI4G34667 Brachypodium distachyon BRADI4G34667 I 0.979
ORGLA08G0230100 Oryza glaberrima ORGLA08G0230100 I 0.979
Sb02g029300 Sorghum bicolor Sb02g029300 I 0.979
GRMZM2G061734 Zea mays GRMZM2G061734 I 0.979
ONIVA08G24550 Oryza nivara ONIVA08G24550 I 0.976
BRADI3G41250 Brachypodium distachyon BRADI3G41250 I 0.974
OPUNC08G19660 Oryza punctata OPUNC08G19660 I 0.974
Pavir.J30793 Panicum virgatum Pavir.J30793 N 0.969
Pavir.Ba01534 Panicum virgatum Pavir.Ba01534 N 0.969
Si013747m.g Setaria italica Si013747m.g N 0.968
Pavir.J28847 Panicum virgatum Pavir.J28847 N 0.968
Pavir.Fb00717 Panicum virgatum Pavir.Fb00717 N 0.968
OGLUM09G16320 Oryza glumaepatula OGLUM09G16320 I 0.964
OBART09G15750 Oryza barthii OBART09G15750 I 0.964
LPERR09G11920 Leersia perrieri LPERR09G11920 I 0.964
ONIVA09G16860 Oryza nivara ONIVA09G16860 I 0.964
SPL18 Oryza sativa OS09G0507100 I 0.964
GSMUA_Achr7G22940_001 Musa acuminata GSMUA_Achr7G22940_001 I 0.961
ORUFI08G24030 Oryza rufipogon ORUFI08G24030 N 0.958
Sb05g017510 Sorghum bicolor Sb05g017510 I 0.956
Sb07g026220 Sorghum bicolor Sb07g026220 N 0.954
GSMUA_Achr9G01380_001 Musa acuminata GSMUA_Achr9G01380_001 I 0.953
GRMZM2G101511 Zea mays GRMZM2G101511 N 0.953
Sb03g044160 Sorghum bicolor Sb03g044160 I 0.951
GSMUA_AchrUn_randomG05850_001 Musa acuminata GSMUA_AchrUn_randomG05850_001 I 0.950
GSMUA_Achr11G19580_001 Musa acuminata GSMUA_Achr11G19580_001 I 0.949
mgf010913m Mimulus guttatus mgf010913m I 0.948
LPERR01G36700 Leersia perrieri LPERR01G36700 I 0.948
mgf003797m Mimulus guttatus mgf003797m I 0.948
MLOC_52321 Hordeum vulgare MLOC_52321 I 0.947
BGIOSGA005075 Oryza indica BGIOSGA005075 I 0.946
OGLUM01G46420 Oryza glumaepatula OGLUM01G46420 I 0.946
ONIVA01G48230 Oryza nivara ONIVA01G48230 I 0.946
ORGLA01G0361700 Oryza glaberrima ORGLA01G0361700 I 0.946
OPUNC01G41070 Oryza punctata OPUNC01G41070 I 0.946
OMERI01G39190 Oryza meridionalis OMERI01G39190 I 0.946
ORUFI01G45560 Oryza rufipogon ORUFI01G45560 I 0.946
Pavir.Hb01173 Panicum virgatum Pavir.Hb01173 I 0.944
Si026656m.g Setaria italica Si026656m.g I 0.944
Gorai.013G095700 Gossypium raimondii Gorai.013G095700 I 0.943
BRADI2G59110 Brachypodium distachyon BRADI2G59110 I 0.942
Gorai.002G181700 Gossypium raimondii Gorai.002G181700 I 0.939
SPL19 Oryza sativa OS11G0496600 I 0.938
ORGLA11G0121600 Oryza glaberrima ORGLA11G0121600 I 0.938
GSMUA_AchrUn_randomG08380_001 Musa acuminata GSMUA_AchrUn_randomG08380_001 I 0.937
OS01G0922600 Oryza sativa OS01G0922600 I 0.937
GSMUA_Achr9G29330_001 Musa acuminata GSMUA_Achr9G29330_001 I 0.937
GSMUA_Achr6G06030_001 Musa acuminata GSMUA_Achr6G06030_001 I 0.936
Ciclev10031834m.g Citrus clementina Ciclev10031834m.g I 0.935
orange1.1g016971m.g Citrus sinensis orange1.1g016971m.g I 0.935
PK19500.1 Cannabis sativa PK19500.1 I 0.933
GRMZM2G106798 Zea mays GRMZM2G106798 I 0.933
GSMUA_Achr2G06150_001 Musa acuminata GSMUA_Achr2G06150_001 I 0.933
GSMUA_Achr5G25090_001 Musa acuminata GSMUA_Achr5G25090_001 I 0.933
evm.TU.supercontig_1141.2 Carica papaya evm.TU.supercontig_1141.2 I 0.933
GSMUA_Achr6G27520_001 Musa acuminata GSMUA_Achr6G27520_001 I 0.933
TCM_008671 Theobroma cacao TCM_008671 I 0.931
Gorai.012G185700 Gossypium raimondii Gorai.012G185700 N 0.931
Gorai.008G166000 Gossypium raimondii Gorai.008G166000 I 0.931
Aquca_011_00114 Aquilegia coerulea Aquca_011_00114 I 0.931
GRMZM2G371033 Zea mays GRMZM2G371033 I 0.929
GSMUA_AchrUn_randomG21900_001 Musa acuminata GSMUA_AchrUn_randomG21900_001 I 0.929
OBART01G42150 Oryza barthii OBART01G42150 I 0.929
GSMUA_Achr4G16050_001 Musa acuminata GSMUA_Achr4G16050_001 I 0.929
cassava42933.valid.m1 Manihot esculenta cassava42933.valid.m1 I 0.928
cassava6548.valid.m1 Manihot esculenta cassava6548.valid.m1 I 0.928
Gorai.005G164600 Gossypium raimondii Gorai.005G164600 I 0.928
29929.m004627 Ricinus communis 29929.m004627 I 0.928
TCM_014668 Theobroma cacao TCM_014668 I 0.927
VIT_01s0010g03910 Vitis vinifera VIT_01s0010g03910 I 0.927
Lus10015764.g Linum usitatissimum Lus10015764.g I 0.927
AMTR_s00013p00150040 Amborella trichopoda AMTR_s00013p00150040 I 0.925
Lus10011348.g Linum usitatissimum Lus10011348.g I 0.925
OMERI11G11920 Oryza meridionalis OMERI11G11920 I 0.925
GLYMA08G01450 Glycine max GLYMA08G01450 I 0.925
Pm025028 Prunus mume Pm025028 I 0.925
orange1.1g021420m.g Citrus sinensis orange1.1g021420m.g I 0.924
Ciclev10032171m.g Citrus clementina Ciclev10032171m.g I 0.924
TCM_011483 Theobroma cacao TCM_011483 I 0.923
Eucgr.B00631 Eucalyptus grandis Eucgr.B00631 I 0.922
PRUPE_ppa003644mg Prunus persica PRUPE_ppa003644mg I 0.922
Gorai.003G102800 Gossypium raimondii Gorai.003G102800 I 0.922
gene26117-v1.0-hybrid Fragaria vesca gene26117-v1.0-hybrid I 0.922
Eucgr.K02708 Eucalyptus grandis Eucgr.K02708 I 0.921
Pavir.J02262 Panicum virgatum Pavir.J02262 I 0.921
Pavir.Ea03909 Panicum virgatum Pavir.Ea03909 I 0.921
Si001804m.g Setaria italica Si001804m.g I 0.921
GLYMA05G38180 Glycine max GLYMA05G38180 I 0.920
Cla004156 Citrullus lanatus Cla004156 I 0.920
Cucsa.054050 Cucumis sativus Cucsa.054050 I 0.920
Ca_05711 Cicer arietinum Ca_05711 I 0.919
MTR_8g096780 Medicago truncatula MTR_8g096780 I 0.919
Thhalv10013892m.g Eutrema salsugineum Thhalv10013892m.g I 0.919
Bo9g097630 Brassica oleracea Bo9g097630 I 0.919
POPTR_0015s11100 Populus trichocarpa POPTR_0015s11100 I 0.918
Lus10003126.g Linum usitatissimum Lus10003126.g N 0.918
SPL13A Arabidopsis thaliana AT5G50670 D 0.917
SPL13A Arabidopsis thaliana AT5G50570 I 0.917
Carubv10026628m.g Capsella rubella Carubv10026628m.g I 0.917
gene06295-v1.0-hybrid Fragaria vesca gene06295-v1.0-hybrid I 0.917
Cagra.0117s0007 Capsella grandiflora Cagra.0117s0007 I 0.917
Bo3g024180 Brassica oleracea Bo3g024180 I 0.917
Cucsa.392170 Cucumis sativus Cucsa.392170 I 0.917
Pm024528 Prunus mume Pm024528 I 0.917
Cla002666 Citrullus lanatus Cla002666 I 0.917
POPTR_0012s10260 Populus trichocarpa POPTR_0012s10260 I 0.917
GLYMA19G26390 Glycine max GLYMA19G26390 I 0.917
PRUPE_ppa006611mg Prunus persica PRUPE_ppa006611mg I 0.917
PK02140.1 Cannabis sativa PK02140.1 I 0.916
scaffold_801495.1 Arabidopsis lyrata scaffold_801495.1 I 0.914
Bostr.15774s0206 Boechera stricta Bostr.15774s0206 I 0.914
Bra022766 Brassica rapa Bra022766 I 0.914
SapurV1A.1018s0120 Salix purpurea SapurV1A.1018s0120 I 0.913
SapurV1A.0168s0440 Salix purpurea SapurV1A.0168s0440 I 0.912
Solyc05g012040.2 Solanum lycopersicum Solyc05g012040.2 I 0.911
MTR_3g099080 Medicago truncatula MTR_3g099080 I 0.911
GLYMA04G37391 Glycine max GLYMA04G37391 I 0.911
Ca_01426 Cicer arietinum Ca_01426 I 0.911
LPERR11G11330 Leersia perrieri LPERR11G11330 I 0.911
PGSC0003DMG400028308 Solanum tuberosum PGSC0003DMG400028308 I 0.911
GLYMA06G17700 Glycine max GLYMA06G17700 I 0.911
Cucsa.157230 Cucumis sativus Cucsa.157230 I 0.911
VIT_17s0000g01260 Vitis vinifera VIT_17s0000g01260 I 0.910
SapurV1A.0173s0270 Salix purpurea SapurV1A.0173s0270 I 0.910
Eucgr.B03518 Eucalyptus grandis Eucgr.B03518 I 0.908
Cla019579 Citrullus lanatus Cla019579 I 0.907
GLYMA16G05895 Glycine max GLYMA16G05895 I 0.907
POPTR_0003s16780 Populus trichocarpa POPTR_0003s16780 I 0.905
30147.m014478 Ricinus communis 30147.m014478 I 0.905
Pavir.Fa00457 Panicum virgatum Pavir.Fa00457 I 0.903
POPTR_0001s13630 Populus trichocarpa POPTR_0001s13630 I 0.901
SapurV1A.1460s0110 Salix purpurea SapurV1A.1460s0110 I 0.901
orange1.1g008680m.g Citrus sinensis orange1.1g008680m.g I 0.896
cassava17811.valid.m1 Manihot esculenta cassava17811.valid.m1 I 0.896
Ciclev10019546m.g Citrus clementina Ciclev10019546m.g I 0.896
VIT_14s0068g01780 Vitis vinifera VIT_14s0068g01780 N 0.895
Cucsa.198630 Cucumis sativus Cucsa.198630 I 0.893
GLYMA17G08840 Glycine max GLYMA17G08840 I 0.893
GLYMA0005S50 Glycine max GLYMA0005S50 I 0.893
Ca_19449 Cicer arietinum Ca_19449 I 0.893
MTR_4g109770 Medicago truncatula MTR_4g109770 I 0.893
GLYMA04G32002 Glycine max GLYMA04G32002 I 0.893
Cla001541 Citrullus lanatus Cla001541 I 0.893
Cucsa.349620 Cucumis sativus Cucsa.349620 I 0.893
MTR_2g461920 Medicago truncatula MTR_2g461920 I 0.893
MDP0000193702 Malus domestica MDP0000193702 I 0.892
MDP0000146640 Malus domestica MDP0000146640 I 0.892
MDP0000778465 Malus domestica MDP0000778465 I 0.892
MDP0000119458 Malus domestica MDP0000119458 I 0.892
PGSC0003DMG400024527 Solanum tuberosum PGSC0003DMG400024527 I 0.890
Solyc03g114850.2 Solanum lycopersicum Solyc03g114850.2 I 0.890
Solyc05g015840.2 Solanum lycopersicum Solyc05g015840.2 I 0.889
TCM_014330 Theobroma cacao TCM_014330 I 0.889
PGSC0003DMG400021902 Solanum tuberosum PGSC0003DMG400021902 I 0.889
VIT_17s0000g05020 Vitis vinifera VIT_17s0000g05020 I 0.888
cassava39122.m1 Manihot esculenta cassava39122.m1 I 0.888
SapurV1A.0072s0340 Salix purpurea SapurV1A.0072s0340 I 0.888
Cucsa.113410 Cucumis sativus Cucsa.113410 I 0.888
Cla019331 Citrullus lanatus Cla019331 I 0.888
POPTR_0010s16400 Populus trichocarpa POPTR_0010s16400 I 0.888
30174.m009082 Ricinus communis 30174.m009082 I 0.888
Cla018827 Citrullus lanatus Cla018827 I 0.888
LjT35D18.50.nc Lotus japonicus LjT35D18.50.nc I 0.887