Sb02g029300 (Sorghum bicolor)
SBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03110 (SBP) IPR004333 Sb02g029300 T322994_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SPL13A
M07265_2.00 		Arabidopsis thaliana
DNYGTACGGWH
DWCCGTACRNH		 Dap-seq
OMalley et al.(2016)
SPL13_col_a 		0.918 0.760
For this family, TFs with SR scores > 0.885 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Sb02g029300.1 SBP 124 198

Links

Other SBP family TFs
Other Sorghum bicolor TFs

171 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GRMZM2G061734 Zea mays GRMZM2G061734 I 0.984
BRADI4G34667 Brachypodium distachyon BRADI4G34667 I 0.984
OMERI06G13610 Oryza meridionalis OMERI06G13610 I 0.983
SPL16 Oryza sativa OS08G0531600 I 0.983
OGLUM08G22810 Oryza glumaepatula OGLUM08G22810 I 0.983
ORGLA08G0230100 Oryza glaberrima ORGLA08G0230100 I 0.981
LPERR08G18310 Leersia perrieri LPERR08G18310 I 0.979
BRADI3G41250 Brachypodium distachyon BRADI3G41250 I 0.978
ONIVA08G24550 Oryza nivara ONIVA08G24550 I 0.978
OPUNC08G19660 Oryza punctata OPUNC08G19660 I 0.978
Pavir.Ba01534 Panicum virgatum Pavir.Ba01534 N 0.976
Pavir.J30793 Panicum virgatum Pavir.J30793 N 0.976
Pavir.J28847 Panicum virgatum Pavir.J28847 N 0.974
Si013747m.g Setaria italica Si013747m.g N 0.974
Pavir.Fb00717 Panicum virgatum Pavir.Fb00717 N 0.974
ONIVA09G16860 Oryza nivara ONIVA09G16860 I 0.973
LPERR09G11920 Leersia perrieri LPERR09G11920 I 0.973
OGLUM09G16320 Oryza glumaepatula OGLUM09G16320 I 0.973
SPL18 Oryza sativa OS09G0507100 I 0.973
OBART09G15750 Oryza barthii OBART09G15750 I 0.973
Sb07g026220 Sorghum bicolor Sb07g026220 N 0.965
Sb05g017510 Sorghum bicolor Sb05g017510 I 0.964
GRMZM2G101511 Zea mays GRMZM2G101511 N 0.963
ORUFI08G24030 Oryza rufipogon ORUFI08G24030 N 0.962
GSMUA_Achr7G22940_001 Musa acuminata GSMUA_Achr7G22940_001 I 0.962
GSMUA_AchrUn_randomG05850_001 Musa acuminata GSMUA_AchrUn_randomG05850_001 I 0.960
GSMUA_Achr11G19580_001 Musa acuminata GSMUA_Achr11G19580_001 I 0.957
Sb03g044160 Sorghum bicolor Sb03g044160 I 0.955
mgf010913m Mimulus guttatus mgf010913m I 0.954
LPERR01G36700 Leersia perrieri LPERR01G36700 I 0.954
mgf003797m Mimulus guttatus mgf003797m I 0.954
Pavir.Hb01173 Panicum virgatum Pavir.Hb01173 I 0.953
Si026656m.g Setaria italica Si026656m.g I 0.953
MLOC_52321 Hordeum vulgare MLOC_52321 I 0.953
OGLUM01G46420 Oryza glumaepatula OGLUM01G46420 I 0.952
ORUFI01G45560 Oryza rufipogon ORUFI01G45560 I 0.952
BGIOSGA005075 Oryza indica BGIOSGA005075 I 0.952
ORGLA01G0361700 Oryza glaberrima ORGLA01G0361700 I 0.952
OPUNC01G41070 Oryza punctata OPUNC01G41070 I 0.952
OMERI01G39190 Oryza meridionalis OMERI01G39190 I 0.952
ONIVA01G48230 Oryza nivara ONIVA01G48230 I 0.952
GSMUA_Achr9G01380_001 Musa acuminata GSMUA_Achr9G01380_001 I 0.952
ORGLA11G0121600 Oryza glaberrima ORGLA11G0121600 I 0.948
SPL19 Oryza sativa OS11G0496600 I 0.948
BRADI2G59110 Brachypodium distachyon BRADI2G59110 I 0.946
Gorai.002G181700 Gossypium raimondii Gorai.002G181700 I 0.946
GSMUA_AchrUn_randomG21900_001 Musa acuminata GSMUA_AchrUn_randomG21900_001 I 0.944
Gorai.013G095700 Gossypium raimondii Gorai.013G095700 I 0.944
GRMZM2G106798 Zea mays GRMZM2G106798 I 0.943
GSMUA_Achr6G06030_001 Musa acuminata GSMUA_Achr6G06030_001 I 0.943
GSMUA_Achr4G16050_001 Musa acuminata GSMUA_Achr4G16050_001 I 0.943
GSMUA_AchrUn_randomG08380_001 Musa acuminata GSMUA_AchrUn_randomG08380_001 I 0.940
OS01G0922600 Oryza sativa OS01G0922600 I 0.940
TCM_008671 Theobroma cacao TCM_008671 I 0.939
GSMUA_Achr5G25090_001 Musa acuminata GSMUA_Achr5G25090_001 I 0.939
Aquca_011_00114 Aquilegia coerulea Aquca_011_00114 I 0.939
Gorai.008G166000 Gossypium raimondii Gorai.008G166000 I 0.939
GSMUA_Achr9G29330_001 Musa acuminata GSMUA_Achr9G29330_001 I 0.939
OBART01G42150 Oryza barthii OBART01G42150 I 0.937
PK19500.1 Cannabis sativa PK19500.1 I 0.937
VIT_01s0010g03910 Vitis vinifera VIT_01s0010g03910 I 0.936
GRMZM2G371033 Zea mays GRMZM2G371033 I 0.935
OMERI11G11920 Oryza meridionalis OMERI11G11920 I 0.935
orange1.1g021420m.g Citrus sinensis orange1.1g021420m.g I 0.933
Gorai.005G164600 Gossypium raimondii Gorai.005G164600 I 0.933
GSMUA_Achr6G27520_001 Musa acuminata GSMUA_Achr6G27520_001 I 0.933
Ciclev10032171m.g Citrus clementina Ciclev10032171m.g I 0.933
GSMUA_Achr2G06150_001 Musa acuminata GSMUA_Achr2G06150_001 I 0.932
Gorai.012G185700 Gossypium raimondii Gorai.012G185700 N 0.931
Si001804m.g Setaria italica Si001804m.g I 0.930
Pavir.Ea03909 Panicum virgatum Pavir.Ea03909 I 0.930
Eucgr.K02708 Eucalyptus grandis Eucgr.K02708 I 0.930
Pavir.J02262 Panicum virgatum Pavir.J02262 I 0.930
GLYMA08G01450 Glycine max GLYMA08G01450 I 0.928
Ca_05711 Cicer arietinum Ca_05711 I 0.927
MTR_8g096780 Medicago truncatula MTR_8g096780 I 0.927
cassava6548.valid.m1 Manihot esculenta cassava6548.valid.m1 I 0.926
PK02140.1 Cannabis sativa PK02140.1 I 0.926
29929.m004627 Ricinus communis 29929.m004627 I 0.926
GLYMA05G38180 Glycine max GLYMA05G38180 I 0.926
cassava42933.valid.m1 Manihot esculenta cassava42933.valid.m1 I 0.926
LPERR11G11330 Leersia perrieri LPERR11G11330 I 0.925
Lus10015764.g Linum usitatissimum Lus10015764.g I 0.925
AMTR_s00013p00150040 Amborella trichopoda AMTR_s00013p00150040 I 0.925
evm.TU.supercontig_1141.2 Carica papaya evm.TU.supercontig_1141.2 I 0.925
TCM_014668 Theobroma cacao TCM_014668 I 0.925
Ciclev10031834m.g Citrus clementina Ciclev10031834m.g I 0.924
gene06295-v1.0-hybrid Fragaria vesca gene06295-v1.0-hybrid I 0.924
orange1.1g016971m.g Citrus sinensis orange1.1g016971m.g I 0.924
gene26117-v1.0-hybrid Fragaria vesca gene26117-v1.0-hybrid I 0.923
Eucgr.B00631 Eucalyptus grandis Eucgr.B00631 I 0.923
Gorai.003G102800 Gossypium raimondii Gorai.003G102800 I 0.923
Lus10011348.g Linum usitatissimum Lus10011348.g I 0.923
POPTR_0015s11100 Populus trichocarpa POPTR_0015s11100 I 0.923
PRUPE_ppa003644mg Prunus persica PRUPE_ppa003644mg I 0.923
Cla002666 Citrullus lanatus Cla002666 I 0.922
POPTR_0012s10260 Populus trichocarpa POPTR_0012s10260 I 0.922
Cucsa.392170 Cucumis sativus Cucsa.392170 I 0.922
PRUPE_ppa006611mg Prunus persica PRUPE_ppa006611mg I 0.922
Pm025028 Prunus mume Pm025028 I 0.922
Pm024528 Prunus mume Pm024528 I 0.922
Thhalv10013892m.g Eutrema salsugineum Thhalv10013892m.g I 0.920
Bo9g097630 Brassica oleracea Bo9g097630 I 0.920
scaffold_801495.1 Arabidopsis lyrata scaffold_801495.1 I 0.919
SapurV1A.1018s0120 Salix purpurea SapurV1A.1018s0120 I 0.919
Bostr.15774s0206 Boechera stricta Bostr.15774s0206 I 0.919
Carubv10026628m.g Capsella rubella Carubv10026628m.g I 0.918
Cagra.0117s0007 Capsella grandiflora Cagra.0117s0007 I 0.918
SPL13A Arabidopsis thaliana AT5G50670 D 0.918
Bo3g024180 Brassica oleracea Bo3g024180 I 0.918
TCM_011483 Theobroma cacao TCM_011483 I 0.918
SPL13A Arabidopsis thaliana AT5G50570 I 0.918
SapurV1A.0168s0440 Salix purpurea SapurV1A.0168s0440 I 0.917
Cucsa.157230 Cucumis sativus Cucsa.157230 I 0.916
Lus10003126.g Linum usitatissimum Lus10003126.g N 0.916
GLYMA06G17700 Glycine max GLYMA06G17700 I 0.916
Ca_01426 Cicer arietinum Ca_01426 I 0.916
GLYMA04G37391 Glycine max GLYMA04G37391 I 0.916
MTR_3g099080 Medicago truncatula MTR_3g099080 I 0.916
30147.m014478 Ricinus communis 30147.m014478 I 0.916
VIT_17s0000g01260 Vitis vinifera VIT_17s0000g01260 I 0.915
Bra022766 Brassica rapa Bra022766 I 0.915
Cucsa.054050 Cucumis sativus Cucsa.054050 I 0.914
Cla004156 Citrullus lanatus Cla004156 I 0.914
PGSC0003DMG400028308 Solanum tuberosum PGSC0003DMG400028308 I 0.912
Solyc05g012040.2 Solanum lycopersicum Solyc05g012040.2 I 0.912
Cla019579 Citrullus lanatus Cla019579 I 0.909
Eucgr.B03518 Eucalyptus grandis Eucgr.B03518 I 0.909
SapurV1A.0173s0270 Salix purpurea SapurV1A.0173s0270 I 0.908
GLYMA19G26390 Glycine max GLYMA19G26390 I 0.908
GLYMA16G05895 Glycine max GLYMA16G05895 I 0.905
gene01338-v1.0-hybrid Fragaria vesca gene01338-v1.0-hybrid I 0.904
POPTR_0003s16780 Populus trichocarpa POPTR_0003s16780 I 0.903
cassava17811.valid.m1 Manihot esculenta cassava17811.valid.m1 I 0.902
Pavir.Fa00457 Panicum virgatum Pavir.Fa00457 I 0.902
Solyc05g015840.2 Solanum lycopersicum Solyc05g015840.2 I 0.901
VIT_14s0068g01780 Vitis vinifera VIT_14s0068g01780 N 0.901
PGSC0003DMG400021902 Solanum tuberosum PGSC0003DMG400021902 I 0.901
PK14243.1 Cannabis sativa PK14243.1 N 0.899
Cucsa.349620 Cucumis sativus Cucsa.349620 I 0.899
Cla001541 Citrullus lanatus Cla001541 I 0.899
MDP0000119458 Malus domestica MDP0000119458 I 0.898
MDP0000193702 Malus domestica MDP0000193702 I 0.898
POPTR_0001s13630 Populus trichocarpa POPTR_0001s13630 I 0.898
SapurV1A.1460s0110 Salix purpurea SapurV1A.1460s0110 I 0.898
orange1.1g008680m.g Citrus sinensis orange1.1g008680m.g I 0.897
Ciclev10019546m.g Citrus clementina Ciclev10019546m.g I 0.897
MTR_4g109770 Medicago truncatula MTR_4g109770 I 0.894
Ca_19449 Cicer arietinum Ca_19449 I 0.894
Cucsa.198630 Cucumis sativus Cucsa.198630 I 0.894
GLYMA17G08840 Glycine max GLYMA17G08840 I 0.894
GLYMA04G32002 Glycine max GLYMA04G32002 I 0.894
GLYMA0005S50 Glycine max GLYMA0005S50 I 0.894
MTR_2g461920 Medicago truncatula MTR_2g461920 I 0.894
MDP0000146640 Malus domestica MDP0000146640 I 0.893
MDP0000778465 Malus domestica MDP0000778465 I 0.893
PGSC0003DMG400024527 Solanum tuberosum PGSC0003DMG400024527 I 0.891
Solyc03g114850.2 Solanum lycopersicum Solyc03g114850.2 I 0.891
TCM_014330 Theobroma cacao TCM_014330 I 0.890
SapurV1A.0072s0340 Salix purpurea SapurV1A.0072s0340 I 0.889
VIT_17s0000g05020 Vitis vinifera VIT_17s0000g05020 I 0.889
30174.m009082 Ricinus communis 30174.m009082 I 0.889
Cucsa.113410 Cucumis sativus Cucsa.113410 I 0.889
POPTR_0010s16400 Populus trichocarpa POPTR_0010s16400 I 0.889
Cla019331 Citrullus lanatus Cla019331 I 0.889
Cla018827 Citrullus lanatus Cla018827 I 0.889
evm.TU.supercontig_2783.1 Carica papaya evm.TU.supercontig_2783.1 I 0.889
cassava39122.m1 Manihot esculenta cassava39122.m1 I 0.888
LjT35D18.50.nc Lotus japonicus LjT35D18.50.nc I 0.886
VIT_01s0011g00130 Vitis vinifera VIT_01s0011g00130 I 0.886
30138.m003942 Ricinus communis 30138.m003942 I 0.886