BRADI3G41250 (Brachypodium distachyon)
SBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03110 (SBP) IPR004333 BRADI3G41250 T322497_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SPL13A
M07265_2.00 		Arabidopsis thaliana
DNYGTACGGWH
DWCCGTACRNH		 Dap-seq
OMalley et al.(2016)
SPL13_col_a 		0.912 0.760
For this family, TFs with SR scores > 0.885 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
BRADI3G41250.1 SBP 120 194

Links

Other SBP family TFs
Other Brachypodium distachyon TFs

137 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BRADI4G34667 Brachypodium distachyon BRADI4G34667 I 0.978
Sb02g029300 Sorghum bicolor Sb02g029300 I 0.978
GRMZM2G061734 Zea mays GRMZM2G061734 I 0.978
SPL16 Oryza sativa OS08G0531600 I 0.976
OMERI06G13610 Oryza meridionalis OMERI06G13610 I 0.976
OGLUM08G22810 Oryza glumaepatula OGLUM08G22810 I 0.976
LPERR08G18310 Leersia perrieri LPERR08G18310 I 0.974
ORGLA08G0230100 Oryza glaberrima ORGLA08G0230100 I 0.974
OPUNC08G19660 Oryza punctata OPUNC08G19660 I 0.971
ONIVA08G24550 Oryza nivara ONIVA08G24550 I 0.970
Pavir.Ba01534 Panicum virgatum Pavir.Ba01534 N 0.968
Pavir.J30793 Panicum virgatum Pavir.J30793 N 0.968
Pavir.Fb00717 Panicum virgatum Pavir.Fb00717 N 0.966
Si013747m.g Setaria italica Si013747m.g N 0.966
Pavir.J28847 Panicum virgatum Pavir.J28847 N 0.966
OGLUM09G16320 Oryza glumaepatula OGLUM09G16320 I 0.963
ONIVA09G16860 Oryza nivara ONIVA09G16860 I 0.963
SPL18 Oryza sativa OS09G0507100 I 0.963
LPERR09G11920 Leersia perrieri LPERR09G11920 I 0.963
OBART09G15750 Oryza barthii OBART09G15750 I 0.963
MLOC_52321 Hordeum vulgare MLOC_52321 I 0.958
GRMZM2G101511 Zea mays GRMZM2G101511 N 0.955
Sb05g017510 Sorghum bicolor Sb05g017510 I 0.955
GSMUA_Achr7G22940_001 Musa acuminata GSMUA_Achr7G22940_001 I 0.953
LPERR01G36700 Leersia perrieri LPERR01G36700 I 0.952
Sb07g026220 Sorghum bicolor Sb07g026220 N 0.952
Sb03g044160 Sorghum bicolor Sb03g044160 I 0.951
GSMUA_Achr11G19580_001 Musa acuminata GSMUA_Achr11G19580_001 I 0.951
BRADI2G59110 Brachypodium distachyon BRADI2G59110 I 0.950
mgf003797m Mimulus guttatus mgf003797m I 0.950
mgf010913m Mimulus guttatus mgf010913m I 0.950
BGIOSGA005075 Oryza indica BGIOSGA005075 I 0.949
OPUNC01G41070 Oryza punctata OPUNC01G41070 I 0.949
OGLUM01G46420 Oryza glumaepatula OGLUM01G46420 I 0.949
OMERI01G39190 Oryza meridionalis OMERI01G39190 I 0.949
ONIVA01G48230 Oryza nivara ONIVA01G48230 I 0.949
ORGLA01G0361700 Oryza glaberrima ORGLA01G0361700 I 0.949
ORUFI01G45560 Oryza rufipogon ORUFI01G45560 I 0.949
GSMUA_AchrUn_randomG05850_001 Musa acuminata GSMUA_AchrUn_randomG05850_001 I 0.949
ORUFI08G24030 Oryza rufipogon ORUFI08G24030 N 0.948
GSMUA_Achr9G01380_001 Musa acuminata GSMUA_Achr9G01380_001 I 0.943
Si026656m.g Setaria italica Si026656m.g I 0.942
Pavir.Hb01173 Panicum virgatum Pavir.Hb01173 I 0.942
ORGLA11G0121600 Oryza glaberrima ORGLA11G0121600 I 0.936
Gorai.005G164600 Gossypium raimondii Gorai.005G164600 I 0.936
SPL19 Oryza sativa OS11G0496600 I 0.936
OS01G0922600 Oryza sativa OS01G0922600 I 0.936
OBART01G42150 Oryza barthii OBART01G42150 I 0.934
Aquca_011_00114 Aquilegia coerulea Aquca_011_00114 I 0.934
TCM_008671 Theobroma cacao TCM_008671 I 0.933
Gorai.008G166000 Gossypium raimondii Gorai.008G166000 I 0.933
GSMUA_AchrUn_randomG21900_001 Musa acuminata GSMUA_AchrUn_randomG21900_001 I 0.932
GRMZM2G106798 Zea mays GRMZM2G106798 I 0.931
PK19500.1 Cannabis sativa PK19500.1 I 0.931
GLYMA05G38180 Glycine max GLYMA05G38180 I 0.931
Gorai.002G181700 Gossypium raimondii Gorai.002G181700 I 0.930
GRMZM2G371033 Zea mays GRMZM2G371033 I 0.930
GSMUA_AchrUn_randomG08380_001 Musa acuminata GSMUA_AchrUn_randomG08380_001 I 0.929
GSMUA_Achr6G06030_001 Musa acuminata GSMUA_Achr6G06030_001 I 0.929
Gorai.013G095700 Gossypium raimondii Gorai.013G095700 I 0.928
VIT_01s0010g03910 Vitis vinifera VIT_01s0010g03910 I 0.927
orange1.1g021420m.g Citrus sinensis orange1.1g021420m.g I 0.927
Ciclev10032171m.g Citrus clementina Ciclev10032171m.g I 0.927
Eucgr.K02708 Eucalyptus grandis Eucgr.K02708 I 0.926
Si001804m.g Setaria italica Si001804m.g I 0.926
Pavir.Ea03909 Panicum virgatum Pavir.Ea03909 I 0.926
Pavir.J02262 Panicum virgatum Pavir.J02262 I 0.926
GSMUA_Achr4G16050_001 Musa acuminata GSMUA_Achr4G16050_001 I 0.926
GLYMA08G01450 Glycine max GLYMA08G01450 I 0.925
GSMUA_Achr5G25090_001 Musa acuminata GSMUA_Achr5G25090_001 I 0.925
GSMUA_Achr9G29330_001 Musa acuminata GSMUA_Achr9G29330_001 I 0.925
GSMUA_Achr6G27520_001 Musa acuminata GSMUA_Achr6G27520_001 I 0.925
AMTR_s00013p00150040 Amborella trichopoda AMTR_s00013p00150040 I 0.924
gene06295-v1.0-hybrid Fragaria vesca gene06295-v1.0-hybrid I 0.924
Ca_05711 Cicer arietinum Ca_05711 I 0.923
MTR_8g096780 Medicago truncatula MTR_8g096780 I 0.923
PK02140.1 Cannabis sativa PK02140.1 I 0.922
GSMUA_Achr2G06150_001 Musa acuminata GSMUA_Achr2G06150_001 I 0.919
POPTR_0012s10260 Populus trichocarpa POPTR_0012s10260 I 0.918
Cucsa.392170 Cucumis sativus Cucsa.392170 I 0.918
Cla002666 Citrullus lanatus Cla002666 I 0.918
Pm024528 Prunus mume Pm024528 I 0.918
PRUPE_ppa006611mg Prunus persica PRUPE_ppa006611mg I 0.918
POPTR_0015s11100 Populus trichocarpa POPTR_0015s11100 I 0.918
cassava6548.valid.m1 Manihot esculenta cassava6548.valid.m1 I 0.917
29929.m004627 Ricinus communis 29929.m004627 I 0.917
cassava42933.valid.m1 Manihot esculenta cassava42933.valid.m1 I 0.917
Bra022766 Brassica rapa Bra022766 I 0.916
Lus10015764.g Linum usitatissimum Lus10015764.g I 0.915
VIT_17s0000g01260 Vitis vinifera VIT_17s0000g01260 I 0.915
OMERI11G11920 Oryza meridionalis OMERI11G11920 I 0.915
TCM_014668 Theobroma cacao TCM_014668 I 0.914
Bo9g097630 Brassica oleracea Bo9g097630 I 0.914
Thhalv10013892m.g Eutrema salsugineum Thhalv10013892m.g I 0.914
Bostr.15774s0206 Boechera stricta Bostr.15774s0206 I 0.914
evm.TU.supercontig_1141.2 Carica papaya evm.TU.supercontig_1141.2 I 0.914
scaffold_801495.1 Arabidopsis lyrata scaffold_801495.1 I 0.914
Lus10011348.g Linum usitatissimum Lus10011348.g I 0.913
SapurV1A.1018s0120 Salix purpurea SapurV1A.1018s0120 I 0.913
Cla019579 Citrullus lanatus Cla019579 I 0.913
orange1.1g016971m.g Citrus sinensis orange1.1g016971m.g I 0.912
SPL13A Arabidopsis thaliana AT5G50670 D 0.912
Gorai.012G185700 Gossypium raimondii Gorai.012G185700 N 0.912
Solyc05g015840.2 Solanum lycopersicum Solyc05g015840.2 I 0.912
PGSC0003DMG400021902 Solanum tuberosum PGSC0003DMG400021902 I 0.912
Bo3g024180 Brassica oleracea Bo3g024180 I 0.912
Carubv10026628m.g Capsella rubella Carubv10026628m.g I 0.912
Ciclev10031834m.g Citrus clementina Ciclev10031834m.g I 0.912
SPL13A Arabidopsis thaliana AT5G50570 I 0.912
SapurV1A.0168s0440 Salix purpurea SapurV1A.0168s0440 I 0.912
Cagra.0117s0007 Capsella grandiflora Cagra.0117s0007 I 0.912
MTR_3g099080 Medicago truncatula MTR_3g099080 I 0.911
Ca_01426 Cicer arietinum Ca_01426 I 0.911
GLYMA04G37391 Glycine max GLYMA04G37391 I 0.911
GLYMA06G17700 Glycine max GLYMA06G17700 I 0.911
Cucsa.157230 Cucumis sativus Cucsa.157230 I 0.909
30147.m014478 Ricinus communis 30147.m014478 I 0.909
LPERR11G11330 Leersia perrieri LPERR11G11330 I 0.908
Lus10003126.g Linum usitatissimum Lus10003126.g N 0.905
Gorai.003G102800 Gossypium raimondii Gorai.003G102800 I 0.901
Eucgr.B00631 Eucalyptus grandis Eucgr.B00631 I 0.901
PRUPE_ppa003644mg Prunus persica PRUPE_ppa003644mg I 0.901
gene26117-v1.0-hybrid Fragaria vesca gene26117-v1.0-hybrid I 0.901
Cla004156 Citrullus lanatus Cla004156 I 0.898
Cucsa.054050 Cucumis sativus Cucsa.054050 I 0.898
Pm025028 Prunus mume Pm025028 I 0.898
SapurV1A.0173s0270 Salix purpurea SapurV1A.0173s0270 I 0.896
Pavir.Fa00457 Panicum virgatum Pavir.Fa00457 I 0.896
TCM_011483 Theobroma cacao TCM_011483 I 0.896
cassava17811.valid.m1 Manihot esculenta cassava17811.valid.m1 I 0.895
GLYMA19G26390 Glycine max GLYMA19G26390 I 0.894
GLYMA16G05895 Glycine max GLYMA16G05895 I 0.891
POPTR_0003s16780 Populus trichocarpa POPTR_0003s16780 I 0.890
Cucsa.349620 Cucumis sativus Cucsa.349620 I 0.889
Cla001541 Citrullus lanatus Cla001541 I 0.889
Solyc05g012040.2 Solanum lycopersicum Solyc05g012040.2 I 0.888
PGSC0003DMG400028308 Solanum tuberosum PGSC0003DMG400028308 I 0.888