GLYMA19G26390 (Glycine max)
SBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03110 (SBP) IPR004333 GLYMA19G26390 T322598_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SPL13A
M07265_2.00 		Arabidopsis thaliana
DNYGTACGGWH
DWCCGTACRNH		 Dap-seq
OMalley et al.(2016)
SPL13_col_a 		0.937 0.773
For this family, TFs with SR scores > 0.885 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GLYMA19G26390.1 SBP 75 149

Links

Other SBP family TFs
Other Glycine max TFs

219 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GLYMA16G05895 Glycine max GLYMA16G05895 I 0.984
MTR_7g028740 Medicago truncatula MTR_7g028740 I 0.976
Ca_24733 Cicer arietinum Ca_24733 I 0.975
LjSGA_061446.1 Lotus japonicus LjSGA_061446.1 I 0.971
Si026656m.g Setaria italica Si026656m.g I 0.964
Pavir.Hb01173 Panicum virgatum Pavir.Hb01173 I 0.964
evm.TU.supercontig_1141.2 Carica papaya evm.TU.supercontig_1141.2 I 0.959
GSMUA_AchrUn_randomG05850_001 Musa acuminata GSMUA_AchrUn_randomG05850_001 I 0.958
GSMUA_Achr7G22940_001 Musa acuminata GSMUA_Achr7G22940_001 I 0.956
PK19500.1 Cannabis sativa PK19500.1 I 0.955
TCM_014668 Theobroma cacao TCM_014668 I 0.955
Ciclev10031834m.g Citrus clementina Ciclev10031834m.g I 0.955
orange1.1g016971m.g Citrus sinensis orange1.1g016971m.g I 0.955
Sb03g044160 Sorghum bicolor Sb03g044160 I 0.953
Sb05g017510 Sorghum bicolor Sb05g017510 I 0.953
VIT_14s0068g01780 Vitis vinifera VIT_14s0068g01780 N 0.952
GSMUA_Achr9G01380_001 Musa acuminata GSMUA_Achr9G01380_001 I 0.951
PGSC0003DMG400028308 Solanum tuberosum PGSC0003DMG400028308 I 0.951
LPERR01G36700 Leersia perrieri LPERR01G36700 I 0.951
MLOC_52321 Hordeum vulgare MLOC_52321 I 0.951
GSMUA_Achr2G06150_001 Musa acuminata GSMUA_Achr2G06150_001 I 0.951
Solyc05g012040.2 Solanum lycopersicum Solyc05g012040.2 I 0.951
GSMUA_Achr6G27520_001 Musa acuminata GSMUA_Achr6G27520_001 I 0.950
Cucsa.392170 Cucumis sativus Cucsa.392170 I 0.949
Cla002666 Citrullus lanatus Cla002666 I 0.949
POPTR_0015s11100 Populus trichocarpa POPTR_0015s11100 I 0.949
PRUPE_ppa006611mg Prunus persica PRUPE_ppa006611mg I 0.949
Pm024528 Prunus mume Pm024528 I 0.949
Gorai.002G181700 Gossypium raimondii Gorai.002G181700 I 0.949
POPTR_0012s10260 Populus trichocarpa POPTR_0012s10260 I 0.949
cassava6548.valid.m1 Manihot esculenta cassava6548.valid.m1 I 0.948
GSMUA_AchrUn_randomG08380_001 Musa acuminata GSMUA_AchrUn_randomG08380_001 I 0.948
OPUNC01G41070 Oryza punctata OPUNC01G41070 I 0.948
GSMUA_Achr9G29330_001 Musa acuminata GSMUA_Achr9G29330_001 I 0.948
OGLUM01G46420 Oryza glumaepatula OGLUM01G46420 I 0.948
BGIOSGA005075 Oryza indica BGIOSGA005075 I 0.948
OMERI01G39190 Oryza meridionalis OMERI01G39190 I 0.948
ORGLA01G0361700 Oryza glaberrima ORGLA01G0361700 I 0.948
ORUFI01G45560 Oryza rufipogon ORUFI01G45560 I 0.948
ONIVA01G48230 Oryza nivara ONIVA01G48230 I 0.948
29929.m004627 Ricinus communis 29929.m004627 I 0.946
PK02140.1 Cannabis sativa PK02140.1 I 0.946
Lus10015764.g Linum usitatissimum Lus10015764.g I 0.946
GSMUA_AchrUn_randomG21900_001 Musa acuminata GSMUA_AchrUn_randomG21900_001 I 0.946
GSMUA_Achr6G06030_001 Musa acuminata GSMUA_Achr6G06030_001 I 0.946
VIT_01s0010g03910 Vitis vinifera VIT_01s0010g03910 I 0.945
BRADI2G59110 Brachypodium distachyon BRADI2G59110 I 0.945
GLYMA08G01450 Glycine max GLYMA08G01450 I 0.945
GLYMA06G17700 Glycine max GLYMA06G17700 I 0.945
SapurV1A.0168s0440 Salix purpurea SapurV1A.0168s0440 I 0.945
GLYMA04G37391 Glycine max GLYMA04G37391 I 0.945
Ca_01426 Cicer arietinum Ca_01426 I 0.945
MTR_3g099080 Medicago truncatula MTR_3g099080 I 0.945
Cucsa.054050 Cucumis sativus Cucsa.054050 I 0.944
VIT_17s0000g01260 Vitis vinifera VIT_17s0000g01260 I 0.944
Cla004156 Citrullus lanatus Cla004156 I 0.944
Eucgr.K02708 Eucalyptus grandis Eucgr.K02708 I 0.944
gene06295-v1.0-hybrid Fragaria vesca gene06295-v1.0-hybrid I 0.944
Gorai.008G166000 Gossypium raimondii Gorai.008G166000 I 0.943
cassava42933.valid.m1 Manihot esculenta cassava42933.valid.m1 I 0.943
Ciclev10032171m.g Citrus clementina Ciclev10032171m.g I 0.943
Aquca_011_00114 Aquilegia coerulea Aquca_011_00114 I 0.943
TCM_008671 Theobroma cacao TCM_008671 I 0.943
scaffold_801495.1 Arabidopsis lyrata scaffold_801495.1 I 0.942
GSMUA_Achr11G19580_001 Musa acuminata GSMUA_Achr11G19580_001 I 0.942
MTR_8g096780 Medicago truncatula MTR_8g096780 I 0.941
Ca_05711 Cicer arietinum Ca_05711 I 0.941
AMTR_s00013p00150040 Amborella trichopoda AMTR_s00013p00150040 I 0.941
Gorai.005G164600 Gossypium raimondii Gorai.005G164600 I 0.940
Gorai.013G095700 Gossypium raimondii Gorai.013G095700 I 0.940
OS01G0922600 Oryza sativa OS01G0922600 I 0.939
SapurV1A.1018s0120 Salix purpurea SapurV1A.1018s0120 I 0.939
Bo9g097630 Brassica oleracea Bo9g097630 I 0.939
Thhalv10013892m.g Eutrema salsugineum Thhalv10013892m.g I 0.939
GLYMA05G38180 Glycine max GLYMA05G38180 I 0.939
Cucsa.157230 Cucumis sativus Cucsa.157230 I 0.938
SPL13A Arabidopsis thaliana AT5G50570 I 0.937
orange1.1g021420m.g Citrus sinensis orange1.1g021420m.g I 0.937
Carubv10026628m.g Capsella rubella Carubv10026628m.g I 0.937
SPL13A Arabidopsis thaliana AT5G50670 D 0.937
Cagra.0117s0007 Capsella grandiflora Cagra.0117s0007 I 0.937
Bo3g024180 Brassica oleracea Bo3g024180 I 0.937
Cla019579 Citrullus lanatus Cla019579 I 0.936
Bostr.15774s0206 Boechera stricta Bostr.15774s0206 I 0.936
Bra022766 Brassica rapa Bra022766 I 0.935
SPL19 Oryza sativa OS11G0496600 I 0.934
SapurV1A.0173s0270 Salix purpurea SapurV1A.0173s0270 I 0.934
LPERR11G11330 Leersia perrieri LPERR11G11330 I 0.934
ORGLA11G0121600 Oryza glaberrima ORGLA11G0121600 I 0.934
GRMZM2G371033 Zea mays GRMZM2G371033 I 0.933
OBART01G42150 Oryza barthii OBART01G42150 I 0.932
MDP0000193702 Malus domestica MDP0000193702 I 0.932
MDP0000119458 Malus domestica MDP0000119458 I 0.932
Lus10000643.g Linum usitatissimum Lus10000643.g I 0.932
Eucgr.B03518 Eucalyptus grandis Eucgr.B03518 I 0.931
Lus10036812.g Linum usitatissimum Lus10036812.g I 0.931
POPTR_0003s16780 Populus trichocarpa POPTR_0003s16780 I 0.930
cassava17811.valid.m1 Manihot esculenta cassava17811.valid.m1 I 0.930
PK14243.1 Cannabis sativa PK14243.1 N 0.927
SapurV1A.1460s0110 Salix purpurea SapurV1A.1460s0110 I 0.927
POPTR_0001s13630 Populus trichocarpa POPTR_0001s13630 I 0.927
Gorai.001G057700 Gossypium raimondii Gorai.001G057700 I 0.926
gene01338-v1.0-hybrid Fragaria vesca gene01338-v1.0-hybrid I 0.926
Si001804m.g Setaria italica Si001804m.g I 0.924
SapurV1A.0176s0470 Salix purpurea SapurV1A.0176s0470 I 0.924
GSMUA_Achr5G25090_001 Musa acuminata GSMUA_Achr5G25090_001 I 0.924
Pavir.J02262 Panicum virgatum Pavir.J02262 I 0.924
Pavir.Ea03909 Panicum virgatum Pavir.Ea03909 I 0.924
GSMUA_Achr4G16050_001 Musa acuminata GSMUA_Achr4G16050_001 I 0.923
Aquca_040_00115 Aquilegia coerulea Aquca_040_00115 N 0.922
Cla001541 Citrullus lanatus Cla001541 I 0.922
Cucsa.349620 Cucumis sativus Cucsa.349620 I 0.922
Pm016138 Prunus mume Pm016138 I 0.920
OMERI11G11920 Oryza meridionalis OMERI11G11920 I 0.918
PRUPE_ppa007202mg Prunus persica PRUPE_ppa007202mg I 0.917
LPERR08G18310 Leersia perrieri LPERR08G18310 I 0.917
PRUPE_ppa003644mg Prunus persica PRUPE_ppa003644mg I 0.917
gene26117-v1.0-hybrid Fragaria vesca gene26117-v1.0-hybrid I 0.917
Eucgr.B00631 Eucalyptus grandis Eucgr.B00631 I 0.917
Gorai.003G102800 Gossypium raimondii Gorai.003G102800 I 0.917
PGSC0003DMG400021902 Solanum tuberosum PGSC0003DMG400021902 I 0.916
Solyc05g015840.2 Solanum lycopersicum Solyc05g015840.2 I 0.916
GLYMA0005S50 Glycine max GLYMA0005S50 I 0.913
MTR_4g109770 Medicago truncatula MTR_4g109770 I 0.913
Ca_19449 Cicer arietinum Ca_19449 I 0.913
GLYMA17G08840 Glycine max GLYMA17G08840 I 0.913
MTR_2g461920 Medicago truncatula MTR_2g461920 I 0.913
Cucsa.198630 Cucumis sativus Cucsa.198630 I 0.913
GLYMA04G32002 Glycine max GLYMA04G32002 I 0.913
GRMZM2G138421 Zea mays GRMZM2G138421 I 0.912
MDP0000146640 Malus domestica MDP0000146640 I 0.912
MDP0000778465 Malus domestica MDP0000778465 I 0.912
TCM_011483 Theobroma cacao TCM_011483 I 0.912
Pm025028 Prunus mume Pm025028 I 0.911
TCM_014330 Theobroma cacao TCM_014330 I 0.910
30174.m009082 Ricinus communis 30174.m009082 I 0.909
PK17790.1 Cannabis sativa PK17790.1 I 0.909
SapurV1A.0072s0340 Salix purpurea SapurV1A.0072s0340 I 0.909
VIT_17s0000g05020 Vitis vinifera VIT_17s0000g05020 I 0.909
POPTR_0010s16400 Populus trichocarpa POPTR_0010s16400 I 0.909
Cla019331 Citrullus lanatus Cla019331 I 0.909
Cucsa.113410 Cucumis sativus Cucsa.113410 I 0.909
evm.TU.supercontig_2783.1 Carica papaya evm.TU.supercontig_2783.1 I 0.908
Sb02g029300 Sorghum bicolor Sb02g029300 I 0.908
GRMZM2G061734 Zea mays GRMZM2G061734 I 0.908
BRADI4G34667 Brachypodium distachyon BRADI4G34667 I 0.908
SPL16 Oryza sativa OS08G0531600 I 0.906
OMERI06G13610 Oryza meridionalis OMERI06G13610 I 0.906
Pavir.Fa00457 Panicum virgatum Pavir.Fa00457 I 0.906
OGLUM08G22810 Oryza glumaepatula OGLUM08G22810 I 0.906
Pavir.Fb01917 Panicum virgatum Pavir.Fb01917 I 0.906
GSMUA_Achr5G22250_001 Musa acuminata GSMUA_Achr5G22250_001 I 0.906
Si013151m.g Setaria italica Si013151m.g I 0.906
30138.m003942 Ricinus communis 30138.m003942 I 0.906
PRUPE_ppa023657mg Prunus persica PRUPE_ppa023657mg I 0.906
Solyc03g114850.2 Solanum lycopersicum Solyc03g114850.2 I 0.905
VIT_01s0011g00130 Vitis vinifera VIT_01s0011g00130 I 0.905
PGSC0003DMG400024527 Solanum tuberosum PGSC0003DMG400024527 I 0.905
PGSC0003DMG400023260 Solanum tuberosum PGSC0003DMG400023260 I 0.904
Solyc12g038520.1 Solanum lycopersicum Solyc12g038520.1 I 0.904
Bo3g042890 Brassica oleracea Bo3g042890 I 0.904
Lus10021141.g Linum usitatissimum Lus10021141.g I 0.904
Thhalv10018638m.g Eutrema salsugineum Thhalv10018638m.g I 0.904
Carubv10020369m.g Capsella rubella Carubv10020369m.g I 0.904
Cagra.0537s0003 Capsella grandiflora Cagra.0537s0003 I 0.904
OBART09G15750 Oryza barthii OBART09G15750 I 0.903
OGLUM09G16320 Oryza glumaepatula OGLUM09G16320 I 0.903
LPERR09G11920 Leersia perrieri LPERR09G11920 I 0.903
SPL18 Oryza sativa OS09G0507100 I 0.903
ONIVA09G16860 Oryza nivara ONIVA09G16860 I 0.903
POPTR_0015s07140 Populus trichocarpa POPTR_0015s07140 I 0.902
POPTR_0008s09750 Populus trichocarpa POPTR_0008s09750 I 0.902
Cla018827 Citrullus lanatus Cla018827 I 0.902
cassava39122.m1 Manihot esculenta cassava39122.m1 I 0.902
30147.m014478 Ricinus communis 30147.m014478 I 0.902
PRUPE_ppa017695mg Prunus persica PRUPE_ppa017695mg I 0.901
Pm030597 Prunus mume Pm030597 I 0.901
fgenesh1_pg.C_scaffold_2001253 Arabidopsis lyrata fgenesh1_pg.C_scaffold_2001253 I 0.900
Lus10007984.g Linum usitatissimum Lus10007984.g I 0.899
AMTR_s00022p00106940 Amborella trichopoda AMTR_s00022p00106940 I 0.898
MDP0000171877 Malus domestica MDP0000171877 I 0.898
MDP0000246046 Malus domestica MDP0000246046 I 0.898
LPERR08G17180 Leersia perrieri LPERR08G17180 I 0.898
cassava43385.valid.m1 Manihot esculenta cassava43385.valid.m1 I 0.898
gene04565-v1.0-hybrid Fragaria vesca gene04565-v1.0-hybrid I 0.898
PDK_20s1709081g002 Phoenix dactylifera PDK_20s1709081g002 I 0.898
SPL6 Arabidopsis thaliana AT1G69170 I 0.898
ORGLA08G0230100 Oryza glaberrima ORGLA08G0230100 I 0.898
Aquca_007_00971 Aquilegia coerulea Aquca_007_00971 I 0.896
SapurV1A.3749s0010 Salix purpurea SapurV1A.3749s0010 I 0.895
Aquca_002_00889 Aquilegia coerulea Aquca_002_00889 I 0.895
AMTR_s00047p00197010 Amborella trichopoda AMTR_s00047p00197010 I 0.895
SapurV1A.0118s0110 Salix purpurea SapurV1A.0118s0110 I 0.895
BRADI3G41250 Brachypodium distachyon BRADI3G41250 I 0.894
GRMZM2G106798 Zea mays GRMZM2G106798 I 0.894
MDP0000142582 Malus domestica MDP0000142582 N 0.894
MDP0000263766 Malus domestica MDP0000263766 I 0.893
cassava7440.valid.m1 Manihot esculenta cassava7440.valid.m1 I 0.893
gene22888-v1.0-hybrid Fragaria vesca gene22888-v1.0-hybrid I 0.893
GRMZM2G098557 Zea mays GRMZM2G098557 I 0.892
GRMZM2G169270 Zea mays GRMZM2G169270 I 0.892
Sb07g027420 Sorghum bicolor Sb07g027420 I 0.892
GSMUA_Achr7G20620_001 Musa acuminata GSMUA_Achr7G20620_001 I 0.891
LjT35D18.50.nc Lotus japonicus LjT35D18.50.nc I 0.891
gene29149-v1.0-hybrid Fragaria vesca gene29149-v1.0-hybrid I 0.891
Bo6g031220 Brassica oleracea Bo6g031220 I 0.890
Bra039656 Brassica rapa Bra039656 I 0.890
orange1.1g008680m.g Citrus sinensis orange1.1g008680m.g I 0.890
Ciclev10019546m.g Citrus clementina Ciclev10019546m.g I 0.890
ORUFI08G22780 Oryza rufipogon ORUFI08G22780 I 0.888
SPL15 Oryza indica BGIOSGA028994 I 0.888
OPUNC08G18470 Oryza punctata OPUNC08G18470 I 0.888
OLONG_014873 Oryza longistaminata OLONG_014873 I 0.888
OBART08G20320 Oryza barthii OBART08G20320 I 0.888
OMERI02G02300 Oryza meridionalis OMERI02G02300 I 0.888
ONIVA08G22940 Oryza nivara ONIVA08G22940 I 0.888
OGLUM08G21580 Oryza glumaepatula OGLUM08G21580 I 0.888
ORGLA08G0179900 Oryza glaberrima ORGLA08G0179900 I 0.888
OPUNC08G19660 Oryza punctata OPUNC08G19660 I 0.887