Ca_24733 (Cicer arietinum)
SBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03110 (SBP) IPR004333 Ca_24733 T323180_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SPL13A
M07265_2.00 		Arabidopsis thaliana
DNYGTACGGWH
DWCCGTACRNH		 Dap-seq
OMalley et al.(2016)
SPL13_col_a 		0.916 0.773
estExt_fgenesh1_pg.C_1940033
M02479_2.00 		Physcomitrella patens
NNGTACGDH
DHCGTACNN		 PBM
Weirauch et al.(2014)
pTH8664 		0.908 0.733
AT1G76580
M02473_2.00 		Arabidopsis thaliana
NNNRTAYNNN
NNNRTAYNNN		 PBM
Weirauch et al.(2014)
pTH8668 		0.902 0.720
PK06791.1
M02482_2.00 		Cannabis sativa
NNGTACGRN
NYCGTACNN		 PBM
Weirauch et al.(2014)
pTH9583 		0.892 0.667
For this family, TFs with SR scores > 0.885 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Ca_24733 SBP 80 154

Links

Other SBP family TFs
Other Cicer arietinum TFs

197 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GLYMA19G26390 Glycine max GLYMA19G26390 I 0.975
GLYMA16G05895 Glycine max GLYMA16G05895 I 0.973
MTR_7g028740 Medicago truncatula MTR_7g028740 I 0.966
LjSGA_061446.1 Lotus japonicus LjSGA_061446.1 I 0.956
Si026656m.g Setaria italica Si026656m.g I 0.948
Pavir.Hb01173 Panicum virgatum Pavir.Hb01173 I 0.948
GSMUA_Achr7G22940_001 Musa acuminata GSMUA_Achr7G22940_001 I 0.946
GRMZM2G371033 Zea mays GRMZM2G371033 I 0.942
GSMUA_AchrUn_randomG05850_001 Musa acuminata GSMUA_AchrUn_randomG05850_001 I 0.937
MLOC_52321 Hordeum vulgare MLOC_52321 I 0.933
Sb05g017510 Sorghum bicolor Sb05g017510 I 0.933
GSMUA_Achr6G06030_001 Musa acuminata GSMUA_Achr6G06030_001 I 0.933
LPERR01G36700 Leersia perrieri LPERR01G36700 I 0.931
Sb03g044160 Sorghum bicolor Sb03g044160 I 0.931
GSMUA_AchrUn_randomG21900_001 Musa acuminata GSMUA_AchrUn_randomG21900_001 I 0.930
GSMUA_AchrUn_randomG08380_001 Musa acuminata GSMUA_AchrUn_randomG08380_001 I 0.929
GSMUA_Achr9G29330_001 Musa acuminata GSMUA_Achr9G29330_001 I 0.929
OMERI01G39190 Oryza meridionalis OMERI01G39190 I 0.928
Solyc05g012040.2 Solanum lycopersicum Solyc05g012040.2 I 0.928
OGLUM01G46420 Oryza glumaepatula OGLUM01G46420 I 0.928
VIT_14s0068g01780 Vitis vinifera VIT_14s0068g01780 N 0.928
GSMUA_Achr6G27520_001 Musa acuminata GSMUA_Achr6G27520_001 I 0.928
BGIOSGA005075 Oryza indica BGIOSGA005075 I 0.928
OPUNC01G41070 Oryza punctata OPUNC01G41070 I 0.928
ORUFI01G45560 Oryza rufipogon ORUFI01G45560 I 0.928
PGSC0003DMG400028308 Solanum tuberosum PGSC0003DMG400028308 I 0.928
evm.TU.supercontig_1141.2 Carica papaya evm.TU.supercontig_1141.2 I 0.928
ORGLA01G0361700 Oryza glaberrima ORGLA01G0361700 I 0.928
GSMUA_Achr11G19580_001 Musa acuminata GSMUA_Achr11G19580_001 I 0.928
ONIVA01G48230 Oryza nivara ONIVA01G48230 I 0.928
orange1.1g016971m.g Citrus sinensis orange1.1g016971m.g I 0.927
BRADI2G59110 Brachypodium distachyon BRADI2G59110 I 0.927
Gorai.002G181700 Gossypium raimondii Gorai.002G181700 I 0.927
Ciclev10031834m.g Citrus clementina Ciclev10031834m.g I 0.927
GSMUA_Achr9G01380_001 Musa acuminata GSMUA_Achr9G01380_001 I 0.926
Gorai.001G057700 Gossypium raimondii Gorai.001G057700 I 0.925
GRMZM2G138421 Zea mays GRMZM2G138421 I 0.924
PK19500.1 Cannabis sativa PK19500.1 I 0.922
TCM_014668 Theobroma cacao TCM_014668 I 0.922
SapurV1A.0173s0270 Salix purpurea SapurV1A.0173s0270 I 0.922
VIT_01s0010g03910 Vitis vinifera VIT_01s0010g03910 I 0.921
GSMUA_Achr2G06150_001 Musa acuminata GSMUA_Achr2G06150_001 I 0.920
Thhalv10013892m.g Eutrema salsugineum Thhalv10013892m.g I 0.919
Bo9g097630 Brassica oleracea Bo9g097630 I 0.919
MTR_8g096780 Medicago truncatula MTR_8g096780 I 0.918
Ca_05711 Cicer arietinum Ca_05711 I 0.918
Eucgr.K02708 Eucalyptus grandis Eucgr.K02708 I 0.918
Aquca_011_00114 Aquilegia coerulea Aquca_011_00114 I 0.918
scaffold_801495.1 Arabidopsis lyrata scaffold_801495.1 I 0.918
PK14243.1 Cannabis sativa PK14243.1 N 0.917
gene22888-v1.0-hybrid Fragaria vesca gene22888-v1.0-hybrid I 0.917
Ciclev10032171m.g Citrus clementina Ciclev10032171m.g I 0.917
Gorai.008G166000 Gossypium raimondii Gorai.008G166000 I 0.917
POPTR_0003s16780 Populus trichocarpa POPTR_0003s16780 I 0.917
Bostr.15774s0206 Boechera stricta Bostr.15774s0206 I 0.917
cassava17811.valid.m1 Manihot esculenta cassava17811.valid.m1 I 0.917
TCM_008671 Theobroma cacao TCM_008671 I 0.917
29929.m004627 Ricinus communis 29929.m004627 I 0.916
Cagra.0117s0007 Capsella grandiflora Cagra.0117s0007 I 0.916
SPL13A Arabidopsis thaliana AT5G50670 D 0.916
cassava6548.valid.m1 Manihot esculenta cassava6548.valid.m1 I 0.916
Carubv10026628m.g Capsella rubella Carubv10026628m.g I 0.916
SPL13A Arabidopsis thaliana AT5G50570 I 0.916
Bo3g024180 Brassica oleracea Bo3g024180 I 0.916
PK02140.1 Cannabis sativa PK02140.1 I 0.916
SapurV1A.3749s0010 Salix purpurea SapurV1A.3749s0010 I 0.915
gene06295-v1.0-hybrid Fragaria vesca gene06295-v1.0-hybrid I 0.915
Lus10015764.g Linum usitatissimum Lus10015764.g I 0.915
SapurV1A.0118s0110 Salix purpurea SapurV1A.0118s0110 I 0.915
Bra022766 Brassica rapa Bra022766 I 0.914
Gorai.005G164600 Gossypium raimondii Gorai.005G164600 I 0.914
POPTR_0001s13630 Populus trichocarpa POPTR_0001s13630 I 0.914
SapurV1A.1460s0110 Salix purpurea SapurV1A.1460s0110 I 0.914
POPTR_0015s11100 Populus trichocarpa POPTR_0015s11100 I 0.913
Cucsa.054050 Cucumis sativus Cucsa.054050 I 0.913
Gorai.013G095700 Gossypium raimondii Gorai.013G095700 I 0.913
Cla004156 Citrullus lanatus Cla004156 I 0.913
PRUPE_ppa006611mg Prunus persica PRUPE_ppa006611mg I 0.912
Cucsa.392170 Cucumis sativus Cucsa.392170 I 0.912
POPTR_0012s10260 Populus trichocarpa POPTR_0012s10260 I 0.912
Cla002666 Citrullus lanatus Cla002666 I 0.912
Pm024528 Prunus mume Pm024528 I 0.912
GLYMA05G38180 Glycine max GLYMA05G38180 I 0.911
Bra039656 Brassica rapa Bra039656 I 0.911
Bo6g031220 Brassica oleracea Bo6g031220 I 0.911
GLYMA08G01450 Glycine max GLYMA08G01450 I 0.911
LjT35D18.50.nc Lotus japonicus LjT35D18.50.nc I 0.911
GRMZM2G106798 Zea mays GRMZM2G106798 I 0.910
orange1.1g021420m.g Citrus sinensis orange1.1g021420m.g I 0.909
OS01G0922600 Oryza sativa OS01G0922600 I 0.909
cassava42933.valid.m1 Manihot esculenta cassava42933.valid.m1 I 0.909
SapurV1A.1018s0120 Salix purpurea SapurV1A.1018s0120 I 0.909
VIT_17s0000g01260 Vitis vinifera VIT_17s0000g01260 I 0.909
fgenesh1_pg.scaffold_50000083 Physcomitrella patens fgenesh1_pg.scaffold_50000083 I 0.908
gene01338-v1.0-hybrid Fragaria vesca gene01338-v1.0-hybrid I 0.908
estExt_fgenesh1_pg.C_1940033 Physcomitrella patens estExt_fgenesh1_pg.C_1940033 D 0.908
OBART01G42150 Oryza barthii OBART01G42150 I 0.906
Ciclev10019546m.g Citrus clementina Ciclev10019546m.g I 0.906
orange1.1g008680m.g Citrus sinensis orange1.1g008680m.g I 0.906
GSMUA_Achr5G25090_001 Musa acuminata GSMUA_Achr5G25090_001 I 0.906
SapurV1A.0168s0440 Salix purpurea SapurV1A.0168s0440 I 0.906
SPL3 Vitis vinifera VIT_10s0003g00050 I 0.906
AMTR_s00013p00150040 Amborella trichopoda AMTR_s00013p00150040 I 0.906
Cucsa.157230 Cucumis sativus Cucsa.157230 I 0.905
GLYMA06G17700 Glycine max GLYMA06G17700 I 0.905
GLYMA04G37391 Glycine max GLYMA04G37391 I 0.905
Ca_01426 Cicer arietinum Ca_01426 I 0.905
MTR_3g099080 Medicago truncatula MTR_3g099080 I 0.905
MDP0000119458 Malus domestica MDP0000119458 I 0.904
MDP0000193702 Malus domestica MDP0000193702 I 0.904
Lus10000643.g Linum usitatissimum Lus10000643.g I 0.903
SELMODRAFT_437670 Selaginella moellendorffii SELMODRAFT_437670 I 0.903
SELMODRAFT_445524 Selaginella moellendorffii SELMODRAFT_445524 I 0.903
AT1G76580 Arabidopsis thaliana AT1G76580 D 0.902
scaffold_202615.1 Arabidopsis lyrata scaffold_202615.1 I 0.902
MDP0000180408 Malus domestica MDP0000180408 I 0.901
PRUPE_ppa000792mg Prunus persica PRUPE_ppa000792mg I 0.901
Cla019579 Citrullus lanatus Cla019579 I 0.901
SPL19 Oryza sativa OS11G0496600 I 0.900
ORGLA11G0121600 Oryza glaberrima ORGLA11G0121600 I 0.900
LPERR11G11330 Leersia perrieri LPERR11G11330 I 0.900
OB08G27190 Oryza brachyantha OB08G27190 I 0.899
POPTR_0007s01030 Populus trichocarpa POPTR_0007s01030 I 0.899
MDP0000919694 Malus domestica MDP0000919694 I 0.898
PRUPE_ppa007202mg Prunus persica PRUPE_ppa007202mg I 0.898
TCM_008150 Theobroma cacao TCM_008150 I 0.897
estExt_fgenesh1_pg.C_1940032 Physcomitrella patens estExt_fgenesh1_pg.C_1940032 I 0.897
Bra041037 Brassica rapa Bra041037 I 0.896
Bo4g005730 Brassica oleracea Bo4g005730 I 0.896
GSMUA_Achr4G16050_001 Musa acuminata GSMUA_Achr4G16050_001 I 0.896
TCM_021482 Theobroma cacao TCM_021482 I 0.896
VIT_05s0020g00700 Vitis vinifera VIT_05s0020g00700 I 0.896
GLYMA10G01211 Glycine max GLYMA10G01211 I 0.895
GLYMA09G09790 Glycine max GLYMA09G09790 I 0.895
Pavir.J02262 Panicum virgatum Pavir.J02262 I 0.895
GLYMA02G01160 Glycine max GLYMA02G01160 I 0.895
GLYMA15G21860 Glycine max GLYMA15G21860 I 0.895
Pm016138 Prunus mume Pm016138 I 0.895
Ciclev10004227m.g Citrus clementina Ciclev10004227m.g I 0.895
Si001804m.g Setaria italica Si001804m.g I 0.895
Pavir.Ea03909 Panicum virgatum Pavir.Ea03909 I 0.895
SapurV1A.0176s0510 Salix purpurea SapurV1A.0176s0510 I 0.895
Lus10036812.g Linum usitatissimum Lus10036812.g I 0.894
evm.TU.supercontig_146.32 Carica papaya evm.TU.supercontig_146.32 I 0.893
29889.m003388 Ricinus communis 29889.m003388 I 0.893
Ciclev10016841m.g Citrus clementina Ciclev10016841m.g I 0.893
POPTR_0008s09810 Populus trichocarpa POPTR_0008s09810 I 0.893
PK06791.1 Cannabis sativa PK06791.1 D 0.892
orange1.1g001971m.g Citrus sinensis orange1.1g001971m.g I 0.892
Lus10010071.g Linum usitatissimum Lus10010071.g I 0.892
Lus10004523.g Linum usitatissimum Lus10004523.g I 0.892
Gorai.008G135700 Gossypium raimondii Gorai.008G135700 I 0.892
Ca_03548 Cicer arietinum Ca_03548 I 0.892
Ciclev10018697m.g Citrus clementina Ciclev10018697m.g I 0.892
Ca_00320 Cicer arietinum Ca_00320 I 0.892
30076.m004574 Ricinus communis 30076.m004574 I 0.892
cassava36085.valid.m1 Manihot esculenta cassava36085.valid.m1 I 0.892
VIT_07s0005g02260 Vitis vinifera VIT_07s0005g02260 I 0.892
Eucgr.A01019 Eucalyptus grandis Eucgr.A01019 I 0.892
MTR_1g035010 Medicago truncatula MTR_1g035010 I 0.892
Eucgr.H04114 Eucalyptus grandis Eucgr.H04114 I 0.892
SapurV1A.0176s0470 Salix purpurea SapurV1A.0176s0470 I 0.891
Cucsa.192470 Cucumis sativus Cucsa.192470 I 0.891
Cla017596 Citrullus lanatus Cla017596 I 0.891
TCM_004922 Theobroma cacao TCM_004922 I 0.891
Bostr.29344s0010 Boechera stricta Bostr.29344s0010 I 0.891
orange1.1g029650m.g Citrus sinensis orange1.1g029650m.g I 0.891
Cagra.3527s0045 Capsella grandiflora Cagra.3527s0045 I 0.891
gene22889-v1.0-hybrid Fragaria vesca gene22889-v1.0-hybrid I 0.891
Carubv10014636m.g Capsella rubella Carubv10014636m.g I 0.890
MTR_1g086250 Medicago truncatula MTR_1g086250 I 0.890
GLYMA03G27195 Glycine max GLYMA03G27195 I 0.890
chr5.CM0158.110.nc Lotus japonicus chr5.CM0158.110.nc I 0.890
Cagra.0007s0069 Capsella grandiflora Cagra.0007s0069 I 0.890
PGSC0003DMG400027151 Solanum tuberosum PGSC0003DMG400027151 I 0.889
Solyc05g053240.2 Solanum lycopersicum Solyc05g053240.2 I 0.889
Eucgr.B03518 Eucalyptus grandis Eucgr.B03518 I 0.889
Eucgr.K01046 Eucalyptus grandis Eucgr.K01046 I 0.888
Thhalv10001295m.g Eutrema salsugineum Thhalv10001295m.g I 0.888
GSMUA_Achr4G20590_001 Musa acuminata GSMUA_Achr4G20590_001 I 0.888
Bostr.25993s0059 Boechera stricta Bostr.25993s0059 I 0.888
Cagra.16630s0008 Capsella grandiflora Cagra.16630s0008 I 0.888
orange1.1g032937m.g Citrus sinensis orange1.1g032937m.g I 0.887
GLYMA20G00900 Glycine max GLYMA20G00900 I 0.887
Ciclev10009879m.g Citrus clementina Ciclev10009879m.g I 0.887
MDP0000156994 Malus domestica MDP0000156994 I 0.887
MDP0000861601 Malus domestica MDP0000861601 I 0.887
GLYMA07G19770 Glycine max GLYMA07G19770 I 0.887
GLYMA07G36180 Glycine max GLYMA07G36180 I 0.886
Gorai.005G071400 Gossypium raimondii Gorai.005G071400 I 0.886
gw1.313.30.1 Physcomitrella patens gw1.313.30.1 I 0.886
SapurV1A.0072s0370 Salix purpurea SapurV1A.0072s0370 I 0.886
Ca_18591 Cicer arietinum Ca_18591 I 0.886
gene29149-v1.0-hybrid Fragaria vesca gene29149-v1.0-hybrid I 0.886
POPTR_0010s16370 Populus trichocarpa POPTR_0010s16370 I 0.886
MTR_2g046550 Medicago truncatula MTR_2g046550 I 0.886
mgf009459m Mimulus guttatus mgf009459m I 0.886