ENSLOCG00000014255 (Lepisosteus oculatus)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 ENSLOCG00000014255 T328284_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Hmg20b
M02487_2.00 		Mus musculus
NNATTATWHWN
NWDWATAATNN		 PBM
Weirauch et al.(2014)
pTH8555 		0.624 0.725
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSLOCP00000017550 Sox 53 121

Links

Other Sox family TFs
Other Lepisosteus oculatus TFs

176 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
hmg20a Danio rerio ENSDARG00000031198 I 0.734
ENSLACG00000004599 Latimeria chalumnae ENSLACG00000004599 I 0.733
ENSAMXG00000013048 Astyanax mexicanus ENSAMXG00000013048 I 0.712
hmg20a Oryzias latipes ENSORLG00000001794 I 0.712
hmg20a Takifugu rubripes ENSTRUG00000016127 I 0.712
ENSXMAG00000000587 Xiphophorus maculatus ENSXMAG00000000587 I 0.712
ENSONIG00000012862 Oreochromis niloticus ENSONIG00000012862 I 0.712
hmg20a Tetraodon nigroviridis ENSTNIG00000008460 I 0.712
ENSPFOG00000014087 Poecilia formosa ENSPFOG00000014087 I 0.712
hmg20a Gasterosteus aculeatus ENSGACG00000003466 I 0.712
ENSGMOG00000015452 Gadus morhua ENSGMOG00000015452 I 0.708
hmg20a Xenopus tropicalis XB-GENE-955353 I 0.699
hmg20a.L Xenopus laevis XB-GENE-955359 I 0.699
estExt_fgenesh2_pg.C_2300014 Branchiostoma floridae estExt_fgenesh2_pg.C_2300014 I 0.672
estExt_fgenesh2_pg.C_2300011 Branchiostoma floridae estExt_fgenesh2_pg.C_2300011 I 0.672
ENSGALG00000002746 Gallus gallus ENSGALG00000002746 I 0.668
HMG20A Taeniopygia guttata ENSTGUG00000003690 I 0.668
ENSFALG00000010751 Ficedula albicollis ENSFALG00000010751 I 0.668
Alligator_sinensis_CCG010545.1 Alligator sinensis Alligator_sinensis_CCG010545.1 I 0.668
Aan_R011791 Calypte anna Aan_R011791 I 0.668
HMG20A Meleagris gallopavo ENSMGAG00000003179 I 0.668
HMG20A Anolis carolinensis ENSACAG00000011520 I 0.668
Brh_R011859 Buceros rhinoceros Brh_R011859 I 0.668
ENSAPLG00000015603 Anas platyrhynchos ENSAPLG00000015603 I 0.668
Afo_R007008 Aptenodytes forsteri Afo_R007008 I 0.668
Tal_R006697 Tyto alba Tal_R006697 I 0.668
Pvit_01997 Pogona vitticeps Pvit_01997 I 0.668
HMG20A Oryctolagus cuniculus ENSOCUG00000005648 I 0.659
HMG20A Ornithorhynchus anatinus ENSOANG00000009993 I 0.659
ENSOARG00000001765 Ovis aries ENSOARG00000001765 I 0.659
HMG20A Macaca mulatta ENSMMUG00000007430 I 0.659
HMG20A Myotis lucifugus ENSMLUG00000011648 I 0.659
HMG20A Microcebus murinus ENSMICG00000011025 I 0.659
HMG20A Otolemur garnettii ENSOGAG00000006630 I 0.659
HMG20A Monodelphis domestica ENSMODG00000012113 I 0.659
Hmg20a Mus musculus ENSMUSG00000032329 I 0.659
ENSMPUG00000017330 Mustela putorius furo ENSMPUG00000017330 I 0.659
ENSNLEG00000008357 Nomascus leucogenys ENSNLEG00000008357 I 0.659
ENSSSCG00000024002 Sus scrofa ENSSSCG00000024002 I 0.659
HMG20A Tursiops truncatus ENSTTRG00000006500 I 0.659
ENSTSYG00000003485 Tarsius syrichta ENSTSYG00000003485 I 0.659
HMG20A Vicugna pacos ENSVPAG00000010013 I 0.659
ENSP00000336856-D1 Bos grunniens ENSP00000336856-D1 I 0.659
Myotis_brandtii_HMG20A_10005450 Myotis brandtii Myotis_brandtii_HMG20A_10005450 I 0.659
ENSP00000371133 Macaca fascicularis ENSP00000371133 I 0.659
HMG20A Tupaia belangeri ENSTBEG00000015283 I 0.659
ENSSTOG00000013818 Ictidomys tridecemlineatus ENSSTOG00000013818 I 0.659
HMG20A Pan troglodytes ENSPTRG00000007326 I 0.659
ENSPPYG00000006683 Pongo abelii ENSPPYG00000006683 I 0.659
Hmg20a Rattus norvegicus ENSRNOG00000016905 I 0.659
ENSSHAG00000012311 Sarcophilus harrisii ENSSHAG00000012311 I 0.659
ENSMEUG00000016429 Macropus eugenii ENSMEUG00000016429 I 0.659
HMG20A Sus scrofa ENSSSCG00000001871 I 0.659
ENSPANG00000015844 Papio anubis ENSPANG00000015844 I 0.659
HMG20A Procavia capensis ENSPCAG00000013879 I 0.659
HMG20A Erinaceus europaeus ENSEEUG00000004472 I 0.659
Hmg20a Dipodomys ordii ENSDORG00000000623 I 0.659
HMG20A Echinops telfairi ENSETEG00000015812 I 0.659
HMG20A Felis catus ENSFCAG00000022539 I 0.659
HMG20A Homo sapiens ENSG00000140382 I 0.659
HMG20A Dasypus novemcinctus ENSDNOG00000034143 I 0.659
ENSCSAG00000014734 Chlorocebus sabaeus ENSCSAG00000014734 I 0.659
HMG20A Bos taurus ENSBTAG00000020441 I 0.659
ENSAMEG00000008348 Ailuropoda melanoleuca ENSAMEG00000008348 I 0.659
HMG20A Canis familiaris ENSCAFG00000018061 I 0.659
HMG20A Callithrix jacchus ENSCJAG00000011131 I 0.659
HMG20A Cavia porcellus ENSCPOG00000011704 I 0.659
HMG20A Gorilla gorilla ENSGGOG00000008439 I 0.659
HMG20A Choloepus hoffmanni ENSCHOG00000012116 I 0.659
HMG20A Loxodonta africana ENSLAFG00000018273 I 0.659
NEMVEDRAFT_v1g105457 Nematostella vectensis NEMVEDRAFT_v1g105457 I 0.655
Gfo_R004366 Geospiza fortis Gfo_R004366 I 0.637
ENSPSIG00000013006 Pelodiscus sinensis ENSPSIG00000013006 I 0.635
Cmyd_10010094 Chelonia mydas Cmyd_10010094 I 0.635
ENSAMXG00000017986 Astyanax mexicanus ENSAMXG00000017986 I 0.632
hmg20b Danio rerio ENSDARG00000042045 I 0.632
HMG20B Callithrix jacchus ENSCJAG00000003488 I 0.632
hmg20b.L Xenopus laevis XB-GENE-5809135 I 0.631
hmg20b Xenopus tropicalis XB-GENE-5809048 I 0.631
hmg20b.S Xenopus laevis XB-GENE-17338323 I 0.631
ENSGMOG00000011717 Gadus morhua ENSGMOG00000011717 I 0.630
ENSOARG00000005838 Ovis aries ENSOARG00000005838 I 0.625
ENSMEUG00000001270 Macropus eugenii ENSMEUG00000001270 I 0.624
HMG20B Tursiops truncatus ENSTTRG00000008832 I 0.624
HMG20B Canis familiaris ENSCAFG00000019215 I 0.624
ENSOARG00000012318 Ovis aries ENSOARG00000012318 I 0.624
HMG20B Loxodonta africana ENSLAFG00000007845 I 0.624
ENSAPLG00000005528 Anas platyrhynchos ENSAPLG00000005528 I 0.624
HMG20B Taeniopygia guttata ENSTGUG00000000169 I 0.624
Alligator_sinensis_CCG000441.1 Alligator sinensis Alligator_sinensis_CCG000441.1 I 0.624
HMG20B Cavia porcellus ENSCPOG00000010777 I 0.624
Pvit_08123 Pogona vitticeps Pvit_08123 I 0.624
ENSAMEG00000005678 Ailuropoda melanoleuca ENSAMEG00000005678 I 0.624
HMG20B Gorilla gorilla ENSGGOG00000014805 I 0.624
HMG20B Ornithorhynchus anatinus ENSOANG00000013515 I 0.624
Cmyd_10002377 Chelonia mydas Cmyd_10002377 I 0.624
HMG20B Gallus gallus ENSGALG00000027838 I 0.624
Gfo_R007604 Geospiza fortis Gfo_R007604 I 0.624
HMG20B Meleagris gallopavo ENSMGAG00000001362 I 0.624
Myotis_brandtii_HMG20B_10016321 Myotis brandtii Myotis_brandtii_HMG20B_10016321 I 0.624
Hmg20b Mus musculus ENSMUSG00000020232 D 0.624
Aan_R011684 Calypte anna Aan_R011684 I 0.624
ENSSTOG00000022314 Ictidomys tridecemlineatus ENSSTOG00000022314 I 0.624
HMG20B Myotis lucifugus ENSMLUG00000022392 I 0.624
ENSBTAG00000047668 Bos taurus ENSBTAG00000047668 I 0.624
ENSPPYG00000009378 Pongo abelii ENSPPYG00000009378 I 0.624
ENSCSAG00000011140 Chlorocebus sabaeus ENSCSAG00000011140 I 0.624
HMG20B Monodelphis domestica ENSMODG00000006884 I 0.624
HMG20B Procavia capensis ENSPCAG00000010772 I 0.624
ENSMPUG00000003925 Mustela putorius furo ENSMPUG00000003925 I 0.624
Afo_R007636 Aptenodytes forsteri Afo_R007636 I 0.624
ENSFALG00000011609 Ficedula albicollis ENSFALG00000011609 I 0.624
ENSPANG00000010575 Papio anubis ENSPANG00000010575 I 0.624
HMG20B Otolemur garnettii ENSOGAG00000014171 I 0.624
ENSPSIG00000010923 Pelodiscus sinensis ENSPSIG00000010923 I 0.624
HMG20B Felis catus ENSFCAG00000026167 I 0.624
HMG20B Homo sapiens ENSG00000064961 I 0.624
ENSSHAG00000007226 Sarcophilus harrisii ENSSHAG00000007226 I 0.624
Hmg20b Rattus norvegicus ENSRNOG00000020601 I 0.624
NEMVEDRAFT_v1g87244 Nematostella vectensis NEMVEDRAFT_v1g87244 I 0.622
hmg20b Gasterosteus aculeatus ENSGACG00000012785 I 0.622
hmg20b Oryzias latipes ENSORLG00000004640 I 0.622
hmg20b Tetraodon nigroviridis ENSTNIG00000010630 I 0.622
ENSONIG00000004838 Oreochromis niloticus ENSONIG00000004838 I 0.622
eef2l2 Takifugu rubripes ENSTRUG00000017921 I 0.622
ENSXMAG00000012647 Xiphophorus maculatus ENSXMAG00000012647 I 0.622
ENSPFOG00000003017 Poecilia formosa ENSPFOG00000003017 I 0.622
HMG20A Sorex araneus ENSSARG00000012609 I 0.619
TriadG23407 Trichoplax adhaerens TriadG23407 I 0.618
ENSDORG00000012598 Dipodomys ordii ENSDORG00000012598 I 0.617
Sakowv30033800m.g Saccoglossus kowalevskii Sakowv30033800m.g I 0.597
ENSAMEG00000010946 Ailuropoda melanoleuca ENSAMEG00000010946 I 0.596
SPU_018371 Strongylocentrotus purpuratus SPU_018371 I 0.594
SPU_004776 Strongylocentrotus purpuratus SPU_004776 I 0.594
ENSLACG00000010699 Latimeria chalumnae ENSLACG00000010699 I 0.583
ENSCPOG00000020879 Cavia porcellus ENSCPOG00000020879 I 0.582
ENSLOCG00000010117 Lepisosteus oculatus ENSLOCG00000010117 I 0.580
Ocbimv22031259m.g Octopus bimaculoides Ocbimv22031259m.g I 0.572
SMAR000790 Strigamia maritima SMAR000790 I 0.558
XP_002161760.1 Hydra magnipapillata XP_002161760.1 I 0.546
XP_002158984.1 Hydra magnipapillata XP_002158984.1 I 0.546
LotgiG196090 Lottia gigantea LotgiG196090 I 0.537
CapteG155070 Capitella teleta CapteG155070 I 0.522
L798_15457 Zootermopsis nevadensis L798_15457 I 0.521
SMAR002604 Strigamia maritima SMAR002604 I 0.519
estExt_fgenesh2_pg.C_1350020 Branchiostoma floridae estExt_fgenesh2_pg.C_1350020 I 0.518
estExt_fgenesh2_pg.C_4800003 Branchiostoma floridae estExt_fgenesh2_pg.C_4800003 I 0.518
NV11068 Nasonia vitripennis NV11068 I 0.499
HHAL010521-PA Halyomorpha halys HHAL010521-PA I 0.494
CLEC002862 Cimex lectularius CLEC002862 I 0.491
ENSMMUP00000031974 Macaca fascicularis ENSMMUP00000031974 I 0.485
ENSMMUG00000028932 Macaca mulatta ENSMMUG00000028932 I 0.485
MCINX003064 Melitaea cinxia MCINX003064 I 0.481
Sakowv30005216m.g Saccoglossus kowalevskii Sakowv30005216m.g I 0.474
HMG20A Ochotona princeps ENSOPRG00000011000 I 0.472
Hsal_13222--XP_625193.1_APIME Harpegnathos saltator Hsal_13222--XP_625193.1_APIME I 0.468
GB41600 Apis mellifera GB41600 I 0.468
HMEL017569 Heliconius melpomene HMEL017569 I 0.467
CapteG191691 Capitella teleta CapteG191691 I 0.465
BGIBMGA005325 Bombyx mori BGIBMGA005325 I 0.463
RPRC008043 Rhodnius prolixus RPRC008043 I 0.456
Cmyd_10009674 Chelonia mydas Cmyd_10009674 I 0.452
LDEC010438 Leptinotarsa decemlineata LDEC010438 I 0.448
HMG20B Pteropus vampyrus ENSPVAG00000004300 I 0.444
ENSMPUG00000007386 Mustela putorius furo ENSMPUG00000007386 I 0.441
CGI_10028818 Crassostrea gigas CGI_10028818 I 0.440
YQE_04289 Dendroctonus ponderosae YQE_04289 N 0.434
LotgiG231408 Lottia gigantea LotgiG231408 I 0.431
ACYPI002322 Acyrthosiphon pisum ACYPI002322 I 0.426
ENSCSAVG00000001086 Ciona savignyi ENSCSAVG00000001086 N 0.425
KGM_20768 Danaus plexippus KGM_20768 N 0.421
CGI_10011619 Crassostrea gigas CGI_10011619 N 0.420
TC011144 Tribolium castaneum TC011144 N 0.419
HelroG189739 Helobdella robusta HelroG189739 N 0.419
ENSCING00000018888 Ciona intestinalis ENSCING00000018888 N 0.418
LDEC005234 Leptinotarsa decemlineata LDEC005234 N 0.417