CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GUITHDRAFT_76406
(
Guillardia theta
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
GUITHDRAFT_76406
T330453_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EKX39368
Sox
12
79
PKKPATSFVMFSNAHREEVKAANPGLSFIDVGKKLGEMWREMDPTVRKEWEDRATAAKDEYLEAKKIW
Links
Other
Sox
family TFs
Other
Guillardia theta
TFs
18 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GUITHDRAFT_114564
Guillardia theta
GUITHDRAFT_114564
N
0.741
GUITHDRAFT_115609
Guillardia theta
GUITHDRAFT_115609
N
0.625
GUITHDRAFT_151501
Guillardia theta
GUITHDRAFT_151501
N
0.562
estExt_Genewise1.C_10428
Volvox carteri
estExt_Genewise1.C_10428
N
0.473
estExt_Genewise1.C_510099
Volvox carteri
estExt_Genewise1.C_510099
N
0.458
CHLREDRAFT_142283
Chlamydomonas reinhardtii
CHLREDRAFT_142283
N
0.457
OSTLU_19125
Ostreococcus lucimarinus
OSTLU_19125
N
0.452
estExt_fgenesh1_pm.C_130068
Coccomyxa subellipsoidea C169
estExt_fgenesh1_pm.C_130068
I
0.438
estExt_Genewise1.C_130158
Chlorella vulgaris
estExt_Genewise1.C_130158
I
0.438
OS01G0666200
Oryza sativa
OS01G0666200
N
0.423
ORUFI01G28620
Oryza rufipogon
ORUFI01G28620
N
0.423
OGLUM01G29550
Oryza glumaepatula
OGLUM01G29550
N
0.423
OB01G34910
Oryza brachyantha
OB01G34910
I
0.423
OBART01G25720
Oryza barthii
OBART01G25720
N
0.423
BGIOSGA004165
Oryza indica
BGIOSGA004165
N
0.423
ORGLA01G0210300
Oryza glaberrima
ORGLA01G0210300
N
0.423
OMERI01G23390
Oryza meridionalis
OMERI01G23390
N
0.423
BGIOSGA004167
Oryza indica
BGIOSGA004167
N
0.420