JAAARDRAFT_119170 (Jaapia argillacea)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 JAAARDRAFT_119170 T330709_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
CRC
M07266_2.00 		Arabidopsis thaliana
TWATCATW
WATGATWA		 Dap-seq
OMalley et al.(2016)
CRC_col_a 		0.433 0.383
CRC
M07267_2.00 		Arabidopsis thaliana
GGTTAGTGTTTTGGAGTCGAATATGACTTG
CAAGTCATATTCGACTCCAAAACACTAACC		 Dap-seq
OMalley et al.(2016)
CRC_colamp_a 		0.433 0.383
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
KDQ63187 Sox 4 50

Links

Other Sox family TFs
Other Jaapia argillacea TFs

131 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PLEOSDRAFT_155914 Pleurotus ostreatus PLEOSDRAFT_155914 I 0.692
GLOTRDRAFT_11089 Gloeophyllum trabeum GLOTRDRAFT_11089 I 0.675
PISMIDRAFT_671062 Pisolithus microcarpus PISMIDRAFT_671062 I 0.668
PAXRUDRAFT_821077 Paxillus rubicundulus PAXRUDRAFT_821077 I 0.661
GALMADRAFT_234655 Galerina marginata GALMADRAFT_234655 N 0.661
PISMIDRAFT_684224 Pisolithus microcarpus PISMIDRAFT_684224 I 0.661
SCHCODRAFT_73620 Schizophyllum commune SCHCODRAFT_73620 N 0.650
CY34DRAFT_799168 Suillus luteus CY34DRAFT_799168 I 0.631
K443DRAFT_87716 Laccaria amethystina K443DRAFT_87716 N 0.629
LACBIDRAFT_301226 Laccaria bicolor LACBIDRAFT_301226 N 0.625
SCLCIDRAFT_19032 Scleroderma citrinum SCLCIDRAFT_19032 I 0.625
M378DRAFT_228709 Amanita muscaria M378DRAFT_228709 N 0.609
M404DRAFT_998370 Pisolithus tinctorius M404DRAFT_998370 N 0.587
CC1G_06617 Coprinopsis cinerea CC1G_06617 N 0.578
PILCRDRAFT_822980 Piloderma croceum PILCRDRAFT_822980 I 0.577
M407DRAFT_126438 Tulasnella calospora M407DRAFT_126438 I 0.575
DACRYDRAFT_54873 Dacryopinax sp DACRYDRAFT_54873 I 0.569
GLOINDRAFT_337448 Rhizophagus irregularis GLOINDRAFT_337448 I 0.562
M422DRAFT_175451 Sphaerobolus stellatus M422DRAFT_175451 I 0.560
HETIRDRAFT_308278 Heterobasidion irregulare HETIRDRAFT_308278 I 0.520
e_gw1.1.2342.1 Heterobasidion annosum e_gw1.1.2342.1 I 0.520
E5Q_04235 Mixia osmundae E5Q_04235 I 0.506
E5Q_04236 Mixia osmundae E5Q_04236 I 0.506
M407DRAFT_28999 Tulasnella calospora M407DRAFT_28999 N 0.500
AMAG_00993 Allomyces macrogynus AMAG_00993 I 0.497
PHACADRAFT_247984 Phanerochaete carnosa PHACADRAFT_247984 N 0.494
K437DRAFT_256012 Tilletiaria anomala K437DRAFT_256012 I 0.489
BOTBODRAFT_110075 Botryobasidium botryosum BOTBODRAFT_110075 N 0.477
GUITHDRAFT_163519 Guillardia theta GUITHDRAFT_163519 I 0.472
PDK_20s1781371g001 Phoenix dactylifera PDK_20s1781371g001 I 0.469
PAN0_018d5604 Pseudozyma antarctica PAN0_018d5604 I 0.468
PaG_05633 Pseudozyma aphidis PaG_05633 I 0.468
UHOR_08529 Ustilago hordei UHOR_08529 I 0.468
UM06001 Ustilago maydis UM06001 I 0.468
sr16632 Sporisorium reilianum sr16632 I 0.463
MVLG_01899 Microbotryum violaceum MVLG_01899 N 0.462
GUITHDRAFT_146350 Guillardia theta GUITHDRAFT_146350 I 0.452
AMTR_s00096p00054100 Amborella trichopoda AMTR_s00096p00054100 I 0.442
AMAG_02504 Allomyces macrogynus AMAG_02504 I 0.441
Cla010239 Citrullus lanatus Cla010239 I 0.441
cassava26804.m1 Manihot esculenta cassava26804.m1 I 0.440
GSMUA_Achr3G25660_001 Musa acuminata GSMUA_Achr3G25660_001 I 0.440
PGSC0003DMG400028360 Solanum tuberosum PGSC0003DMG400028360 I 0.438
Solyc05g012050.2 Solanum lycopersicum Solyc05g012050.2 I 0.438
PSEUBRA_SCAF20g03069 Pseudozyma brasiliensis PSEUBRA_SCAF20g03069 I 0.438
GRMZM2G046829 Zea mays GRMZM2G046829 I 0.437
GLOINDRAFT_342259 Rhizophagus irregularis GLOINDRAFT_342259 I 0.436
SPPG_01639 Spizellomyces punctatus SPPG_01639 I 0.435
Traes_4AS_BE972A2661 Triticum aestivum Traes_4AS_BE972A2661 I 0.433
Traes_4AS_BE972A266 Triticum aestivum Traes_4AS_BE972A266 I 0.433
TRIUR3_31693 Triticum urartu TRIUR3_31693 I 0.433
Traes_4BL_34FE2C7F2 Triticum aestivum Traes_4BL_34FE2C7F2 I 0.433
MDP0000171878 Malus domestica MDP0000171878 I 0.433
TCM_011484 Theobroma cacao TCM_011484 I 0.433
Pavir.Ia04690 Panicum virgatum Pavir.Ia04690 I 0.433
PDK_20s1325902g001 Phoenix dactylifera PDK_20s1325902g001 I 0.433
Si037608m.g Setaria italica Si037608m.g I 0.433
PK13838.1 Cannabis sativa PK13838.1 I 0.433
Thhalv10019126m.g Eutrema salsugineum Thhalv10019126m.g I 0.433
Pavir.Ib00755 Panicum virgatum Pavir.Ib00755 I 0.433
SapurV1A.0176s0460 Salix purpurea SapurV1A.0176s0460 I 0.433
MDP0000291729 Malus domestica MDP0000291729 I 0.433
Ca_12379 Cicer arietinum Ca_12379 I 0.433
Carubv10021641m.g Capsella rubella Carubv10021641m.g I 0.433
Ciclev10033770m.g Citrus clementina Ciclev10033770m.g I 0.433
cassava10710.m1 Manihot esculenta cassava10710.m1 I 0.433
30174.m009083 Ricinus communis 30174.m009083 I 0.433
Cagra.0537s0004 Capsella grandiflora Cagra.0537s0004 I 0.433
Bostr.10273s0455 Boechera stricta Bostr.10273s0455 I 0.433
Cucsa.284430 Cucumis sativus Cucsa.284430 I 0.433
cassava39135.m1 Manihot esculenta cassava39135.m1 I 0.433
mgf007067m Mimulus guttatus mgf007067m I 0.433
Eucgr.B03140 Eucalyptus grandis Eucgr.B03140 I 0.433
evm.TU.contig_30608 Carica papaya evm.TU.contig_30608 I 0.433
Ca_18533 Cicer arietinum Ca_18533 I 0.433
mgf001016m Mimulus guttatus mgf001016m I 0.433
CRC Vitis vinifera VIT_01s0011g00140 I 0.433
Cla010397 Citrullus lanatus Cla010397 I 0.433
Pm030598 Prunus mume Pm030598 I 0.433
gene04566-v1.0-hybrid Fragaria vesca gene04566-v1.0-hybrid I 0.433
Gorai.005G146700 Gossypium raimondii Gorai.005G146700 I 0.433
Lus10036811.g Linum usitatissimum Lus10036811.g I 0.433
MDP0000124879 Malus domestica MDP0000124879 I 0.433
ORGLA03G0081000 Oryza glaberrima ORGLA03G0081000 I 0.433
GSMUA_Achr1G24490_001 Musa acuminata GSMUA_Achr1G24490_001 I 0.433
GSMUA_Achr1G04480_001 Musa acuminata GSMUA_Achr1G04480_001 I 0.433
GRMZM2G102218 Zea mays GRMZM2G102218 I 0.433
GSMUA_Achr1G27150_001 Musa acuminata GSMUA_Achr1G27150_001 I 0.433
GSMUA_Achr3G25290_001 Musa acuminata GSMUA_Achr3G25290_001 I 0.433
GSMUA_Achr6G24550_001 Musa acuminata GSMUA_Achr6G24550_001 I 0.433
Sb01g042850 Sorghum bicolor Sb01g042850 I 0.433
GSMUA_Achr4G01430_001 Musa acuminata GSMUA_Achr4G01430_001 I 0.433
GRMZM2G088309 Zea mays GRMZM2G088309 I 0.433
GLYMA02G13350 Glycine max GLYMA02G13350 I 0.433
BGIOSGA012115 Oryza indica BGIOSGA012115 I 0.433
CRC Arabidopsis thaliana AT1G69180 D 0.433
AMTR_s00047p00199030 Amborella trichopoda AMTR_s00047p00199030 I 0.433
Bo6g108630 Brassica oleracea Bo6g108630 I 0.433
Bra004364 Brassica rapa Bra004364 I 0.433
GLYMA01G08030 Glycine max GLYMA01G08030 I 0.433
CRC Arabidopsis lyrata fgenesh2_kg.2__1172__AT1G69180.1 I 0.433
BRADI1G69900 Brachypodium distachyon BRADI1G69900 I 0.433
GSMUA_Achr8G04340_001 Musa acuminata GSMUA_Achr8G04340_001 I 0.433
GSMUA_Achr5G08930_001 Musa acuminata GSMUA_Achr5G08930_001 I 0.433
OLONG_009200 Oryza longistaminata OLONG_009200 I 0.433
POPTR_0008s09740 Populus trichocarpa POPTR_0008s09740 I 0.433
ORUFI03G08400 Oryza rufipogon ORUFI03G08400 I 0.433
OMERI03G08070 Oryza meridionalis OMERI03G08070 I 0.433
LPERR03G07620 Leersia perrieri LPERR03G07620 I 0.433
OPUNC03G08080 Oryza punctata OPUNC03G08080 I 0.433
ONIVA03G09180 Oryza nivara ONIVA03G09180 I 0.433
OS03G0215200 Oryza sativa OS03G0215200 I 0.433
OGLUM03G08460 Oryza glumaepatula OGLUM03G08460 I 0.433
OB03G18700 Oryza brachyantha OB03G18700 I 0.433
PRUPE_ppa014900mg Prunus persica PRUPE_ppa014900mg I 0.433
OBART03G08320 Oryza barthii OBART03G08320 I 0.433
LPERR07G16630 Leersia perrieri LPERR07G16630 I 0.431
GSMUA_Achr5G23610_001 Musa acuminata GSMUA_Achr5G23610_001 I 0.431
GSMUA_Achr4G31310_001 Musa acuminata GSMUA_Achr4G31310_001 I 0.429
GSMUA_Achr4G22750_001 Musa acuminata GSMUA_Achr4G22750_001 I 0.429
SapurV1A.0072s0330 Salix purpurea SapurV1A.0072s0330 I 0.427
POPTR_0010s16410 Populus trichocarpa POPTR_0010s16410 I 0.427
BGIOSGA025976 Oryza indica BGIOSGA025976 I 0.425
OMERI07G16070 Oryza meridionalis OMERI07G16070 I 0.425
OB07G25220 Oryza brachyantha OB07G25220 I 0.425
ORGLA07G0250200 Oryza glaberrima ORGLA07G0250200 I 0.425
OLONG_001420 Oryza longistaminata OLONG_001420 I 0.425
PFL1_06190 Pseudozyma flocculosa PFL1_06190 I 0.421
GLOINDRAFT_334763 Rhizophagus irregularis GLOINDRAFT_334763 I 0.420
EMIHUDRAFT_208774 Emiliania huxleyi EMIHUDRAFT_208774 N 0.419
Eucgr.B03310 Eucalyptus grandis Eucgr.B03310 I 0.418