OLONG_009629 (Oryza longistaminata)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 OLONG_009629 T331616_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
OLONG_009629-R1 Sox 89 121
OLONG_009629-R1 Sox 117 143
OLONG_009629-R2 Sox 89 121
OLONG_009629-R2 Sox 117 143

Links

Other Sox family TFs
Other Oryza longistaminata TFs

31 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Ca_10726 Cicer arietinum Ca_10726 N 0.645
OGLUM09G19410 Oryza glumaepatula OGLUM09G19410 N 0.628
OPUNC09G17310 Oryza punctata OPUNC09G17310 N 0.628
OBART09G18880 Oryza barthii OBART09G18880 N 0.628
GLYMA16G22060 Glycine max GLYMA16G22060 I 0.628
BGIOSGA031227 Oryza indica BGIOSGA031227 N 0.628
Lus10035991.g Linum usitatissimum Lus10035991.g N 0.617
Lus10013219.g Linum usitatissimum Lus10013219.g N 0.613
Bra012832 Brassica rapa Bra012832 N 0.610
Lus10016695.g Linum usitatissimum Lus10016695.g N 0.603
Cla010647 Citrullus lanatus Cla010647 N 0.567
Lus10027787.g Linum usitatissimum Lus10027787.g N 0.561
MDP0000699531 Malus domestica MDP0000699531 N 0.541
PGSC0003DMG400001413 Solanum tuberosum PGSC0003DMG400001413 N 0.480
Pm010381 Prunus mume Pm010381 N 0.474
CLEC004367 Cimex lectularius CLEC004367 N 0.464
PEQ_0000006801 Parascaris equorum PEQ_0000006801 N 0.463
UCREL1_5722 Eutypa lata UCREL1_5722 N 0.460
HelroG178674 Helobdella robusta HelroG178674 N 0.450
D917_04157 Trichinella nativa D917_04157 N 0.448
JAAARDRAFT_460099 Jaapia argillacea JAAARDRAFT_460099 N 0.445
M407DRAFT_45069 Tulasnella calospora M407DRAFT_45069 N 0.441
BGIBMGA006156 Bombyx mori BGIBMGA006156 N 0.440
EEL_0000370701 Elaeophora elaphi EEL_0000370701 N 0.440
fgenesh1_pg.C_scaffold_10000369 Phanerochaete chrysosporium fgenesh1_pg.C_scaffold_10000369 N 0.439
ASIS002444 Anopheles sinensis ASIS002444 N 0.437
SCHCODRAFT_105718 Schizophyllum commune SCHCODRAFT_105718 N 0.433
Bo6g005800 Brassica oleracea Bo6g005800 N 0.429
MCOS_0000664501 Mesocestoides corti MCOS_0000664501 N 0.428
TSTA_110260 Talaromyces stipitatus TSTA_110260 N 0.418