Ca_10726 (Cicer arietinum)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 Ca_10726 T333595_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Ca_10726 Sox 37 70
Ca_10726 Sox 66 91

Links

Other Sox family TFs
Other Cicer arietinum TFs

31 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GLYMA16G22060 Glycine max GLYMA16G22060 I 0.663
OLONG_009629 Oryza longistaminata OLONG_009629 N 0.645
Lus10035991.g Linum usitatissimum Lus10035991.g N 0.628
Lus10016695.g Linum usitatissimum Lus10016695.g N 0.628
Bra012832 Brassica rapa Bra012832 N 0.608
Lus10013219.g Linum usitatissimum Lus10013219.g N 0.597
Lus10027787.g Linum usitatissimum Lus10027787.g N 0.586
Cla010647 Citrullus lanatus Cla010647 N 0.583
OGLUM09G19410 Oryza glumaepatula OGLUM09G19410 N 0.561
OPUNC09G17310 Oryza punctata OPUNC09G17310 N 0.561
BGIOSGA031227 Oryza indica BGIOSGA031227 N 0.561
OBART09G18880 Oryza barthii OBART09G18880 N 0.561
MDP0000699531 Malus domestica MDP0000699531 N 0.544
Pm010381 Prunus mume Pm010381 N 0.496
PGSC0003DMG400001413 Solanum tuberosum PGSC0003DMG400001413 N 0.478
PEQ_0000006801 Parascaris equorum PEQ_0000006801 N 0.475
HelroG178674 Helobdella robusta HelroG178674 N 0.475
Bo6g005800 Brassica oleracea Bo6g005800 N 0.471
UCREL1_5722 Eutypa lata UCREL1_5722 N 0.465
CLEC004367 Cimex lectularius CLEC004367 N 0.464
D917_04157 Trichinella nativa D917_04157 N 0.462
EEL_0000370701 Elaeophora elaphi EEL_0000370701 N 0.456
fgenesh1_pg.C_scaffold_10000369 Phanerochaete chrysosporium fgenesh1_pg.C_scaffold_10000369 N 0.454
ASIS002444 Anopheles sinensis ASIS002444 N 0.453
JAAARDRAFT_460099 Jaapia argillacea JAAARDRAFT_460099 N 0.445
M407DRAFT_45069 Tulasnella calospora M407DRAFT_45069 N 0.441
BGIBMGA006156 Bombyx mori BGIBMGA006156 N 0.440
SINV25043 Solenopsis invicta SINV25043 N 0.431
SCHCODRAFT_105718 Schizophyllum commune SCHCODRAFT_105718 N 0.430
TSTA_110260 Talaromyces stipitatus TSTA_110260 N 0.418
GPLIN_000170600 Globodera pallida GPLIN_000170600 N 0.416