Traes_3AS_AAAAD30B5 (Triticum aestivum)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 Traes_3AS_AAAAD30B5 T332984_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Traes_3AS_AAAAD30B5.1 Sox 599 667

Links

Other Sox family TFs
Other Triticum aestivum TFs

65 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
TRAES3BF096800150CFD_g Triticum aestivum TRAES3BF096800150CFD_g N 0.741
TRIUR3_14091 Triticum urartu TRIUR3_14091 N 0.741
F775_28104 Aegilops tauschii F775_28104 N 0.741
MLOC_6673 Hordeum vulgare MLOC_6673 N 0.723
OLONG_012679 Oryza longistaminata OLONG_012679 N 0.618
OGLUM05G05400 Oryza glumaepatula OGLUM05G05400 N 0.618
OBART05G05520 Oryza barthii OBART05G05520 N 0.618
OB05G15230 Oryza brachyantha OB05G15230 N 0.618
OPUNC05G05150 Oryza punctata OPUNC05G05150 N 0.618
SSRP1-B Oryza sativa OS05G0182600 N 0.618
ORUFI05G05850 Oryza rufipogon ORUFI05G05850 N 0.618
ORGLA05G0049600 Oryza glaberrima ORGLA05G0049600 N 0.618
LPERR05G04880 Leersia perrieri LPERR05G04880 N 0.618
OMERI05G05210 Oryza meridionalis OMERI05G05210 N 0.618
ONIVA05G05990 Oryza nivara ONIVA05G05990 N 0.618
BGIOSGA019295 Oryza indica BGIOSGA019295 N 0.618
Sb03g003450 Sorghum bicolor Sb03g003450 N 0.593
GRMZM2G032252 Zea mays GRMZM2G032252 N 0.593
Si000646m.g Setaria italica Si000646m.g N 0.593
Pavir.Ea00282 Panicum virgatum Pavir.Ea00282 N 0.593
Pavir.J08546 Panicum virgatum Pavir.J08546 N 0.593
Pavir.J20558 Panicum virgatum Pavir.J20558 N 0.587
LPERR01G05200 Leersia perrieri LPERR01G05200 N 0.587
Pavir.Ca01033 Panicum virgatum Pavir.Ca01033 N 0.587
OB01G15440 Oryza brachyantha OB01G15440 N 0.587
Traes_1DS_C7F1E9F38 Triticum aestivum Traes_1DS_C7F1E9F38 I 0.586
F775_29723 Aegilops tauschii F775_29723 I 0.586
Traes_1BS_15F9D276D Triticum aestivum Traes_1BS_15F9D276D I 0.586
Traes_1AS_3FCB35E65 Triticum aestivum Traes_1AS_3FCB35E65 I 0.586
ORGLA01G0051500 Oryza glaberrima ORGLA01G0051500 N 0.581
BGIOSGA002908 Oryza indica BGIOSGA002908 N 0.581
Si021575m.g Setaria italica Si021575m.g N 0.581
SSRP1-A Oryza sativa OS01G0184900 N 0.581
ORUFI01G05970 Oryza rufipogon ORUFI01G05970 N 0.581
OPUNC01G05380 Oryza punctata OPUNC01G05380 N 0.581
OLONG_023518 Oryza longistaminata OLONG_023518 N 0.581
OBART01G05540 Oryza barthii OBART01G05540 N 0.581
OPUNC02G20230 Oryza punctata OPUNC02G20230 N 0.581
OGLUM01G06010 Oryza glumaepatula OGLUM01G06010 N 0.581
OMERI01G05760 Oryza meridionalis OMERI01G05760 N 0.581
ONIVA01G06280 Oryza nivara ONIVA01G06280 N 0.581
Sb09g005650 Sorghum bicolor Sb09g005650 N 0.580
GRMZM5G842484 Zea mays GRMZM5G842484 N 0.580
MLOC_27773 Hordeum vulgare MLOC_27773 I 0.576
BRADI2G33580 Brachypodium distachyon BRADI2G33580 N 0.574
Pavir.J10741 Panicum virgatum Pavir.J10741 N 0.539
Si024096m.g Setaria italica Si024096m.g N 0.529
mgf024995m Mimulus guttatus mgf024995m I 0.446
SELMODRAFT_166865 Selaginella moellendorffii SELMODRAFT_166865 I 0.443
SELMODRAFT_159743 Selaginella moellendorffii SELMODRAFT_159743 I 0.443
Z518_04911 Rhinocladiella mackenziei Z518_04911 I 0.434
A1O1_01197 Capronia coronata A1O1_01197 I 0.434
A1O7_01726 Cladophialophora yegresii A1O7_01726 I 0.434
G647_10093 Cladophialophora carrionii G647_10093 I 0.434
HMPREF1120_00213 Exophiala dermatitidis HMPREF1120_00213 I 0.434
PV11_09703 Exophiala sideris PV11_09703 I 0.434
A1O3_08778 Capronia epimyces A1O3_08778 I 0.434
PV06_04154 Exophiala oligosperma PV06_04154 I 0.434
PV05_09944 Exophiala xenobiotica PV05_09944 I 0.434
PV08_04655 Exophiala spinifera PV08_04655 I 0.434
AMAG_02260 Allomyces macrogynus AMAG_02260 N 0.432
AMAG_00757 Allomyces macrogynus AMAG_00757 N 0.432
MBM_02410 Marssonina brunnea MBM_02410 I 0.427
M7I_1578 Glarea lozoyensis M7I_1578 I 0.420
BRADI2G05430 Brachypodium distachyon BRADI2G05430 N 0.416