MLOC_6673 (Hordeum vulgare)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 MLOC_6673 T331317_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
MLOC_6673.2 Sox 571 621
MLOC_6673.4 Sox 571 639
MLOC_6673.5 Sox 406 474

Links

Other Sox family TFs
Other Hordeum vulgare TFs

82 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
TRAES3BF096800150CFD_g Triticum aestivum TRAES3BF096800150CFD_g N 0.723
Traes_3AS_AAAAD30B5 Triticum aestivum Traes_3AS_AAAAD30B5 N 0.723
TRIUR3_14091 Triticum urartu TRIUR3_14091 N 0.723
F775_28104 Aegilops tauschii F775_28104 N 0.723
OGLUM05G05400 Oryza glumaepatula OGLUM05G05400 N 0.599
OPUNC05G05150 Oryza punctata OPUNC05G05150 N 0.599
ONIVA05G05990 Oryza nivara ONIVA05G05990 N 0.599
OBART05G05520 Oryza barthii OBART05G05520 N 0.599
LPERR05G04880 Leersia perrieri LPERR05G04880 N 0.599
OLONG_012679 Oryza longistaminata OLONG_012679 N 0.599
ORGLA05G0049600 Oryza glaberrima ORGLA05G0049600 N 0.599
ORUFI05G05850 Oryza rufipogon ORUFI05G05850 N 0.599
BGIOSGA019295 Oryza indica BGIOSGA019295 N 0.599
SSRP1-B Oryza sativa OS05G0182600 N 0.599
OMERI05G05210 Oryza meridionalis OMERI05G05210 N 0.599
OB05G15230 Oryza brachyantha OB05G15230 N 0.599
Sb03g003450 Sorghum bicolor Sb03g003450 N 0.574
GRMZM2G032252 Zea mays GRMZM2G032252 N 0.574
Pavir.Ea00282 Panicum virgatum Pavir.Ea00282 N 0.574
Pavir.J08546 Panicum virgatum Pavir.J08546 N 0.574
Si000646m.g Setaria italica Si000646m.g N 0.574
LPERR01G05200 Leersia perrieri LPERR01G05200 N 0.569
OB01G15440 Oryza brachyantha OB01G15440 N 0.569
Pavir.Ca01033 Panicum virgatum Pavir.Ca01033 N 0.568
Pavir.J20558 Panicum virgatum Pavir.J20558 N 0.568
Traes_1DS_C7F1E9F38 Triticum aestivum Traes_1DS_C7F1E9F38 I 0.567
F775_29723 Aegilops tauschii F775_29723 I 0.567
Traes_1BS_15F9D276D Triticum aestivum Traes_1BS_15F9D276D I 0.567
Traes_1AS_3FCB35E65 Triticum aestivum Traes_1AS_3FCB35E65 I 0.567
OPUNC02G20230 Oryza punctata OPUNC02G20230 N 0.563
ORUFI01G05970 Oryza rufipogon ORUFI01G05970 N 0.563
ORGLA01G0051500 Oryza glaberrima ORGLA01G0051500 N 0.563
SSRP1-A Oryza sativa OS01G0184900 N 0.563
OBART01G05540 Oryza barthii OBART01G05540 N 0.563
OPUNC01G05380 Oryza punctata OPUNC01G05380 N 0.563
OGLUM01G06010 Oryza glumaepatula OGLUM01G06010 N 0.563
BGIOSGA002908 Oryza indica BGIOSGA002908 N 0.563
OLONG_023518 Oryza longistaminata OLONG_023518 N 0.563
OMERI01G05760 Oryza meridionalis OMERI01G05760 N 0.563
ONIVA01G06280 Oryza nivara ONIVA01G06280 N 0.563
Si021575m.g Setaria italica Si021575m.g N 0.562
Sb09g005650 Sorghum bicolor Sb09g005650 N 0.561
GRMZM5G842484 Zea mays GRMZM5G842484 N 0.561
MLOC_27773 Hordeum vulgare MLOC_27773 I 0.557
BRADI2G33580 Brachypodium distachyon BRADI2G33580 N 0.555
Pavir.J10741 Panicum virgatum Pavir.J10741 N 0.520
Si024096m.g Setaria italica Si024096m.g N 0.510
Gorai.008G147700 Gossypium raimondii Gorai.008G147700 I 0.483
SELMODRAFT_159743 Selaginella moellendorffii SELMODRAFT_159743 I 0.462
SELMODRAFT_166865 Selaginella moellendorffii SELMODRAFT_166865 I 0.462
TCM_018380 Theobroma cacao TCM_018380 I 0.451
AMAG_00757 Allomyces macrogynus AMAG_00757 N 0.450
AMAG_02260 Allomyces macrogynus AMAG_02260 N 0.450
Gorai.007G078500 Gossypium raimondii Gorai.007G078500 N 0.436
SapurV1A.2780s0020 Salix purpurea SapurV1A.2780s0020 I 0.435
Chro.20230 Cryptosporidium hominis Chro.20230 N 0.432
cgd2_2120 Cryptosporidium parvum cgd2_2120 N 0.432
gw1.20.66.1 Ostreococcus RCC809 gw1.20.66.1 N 0.431
PDK_20s1437671g003 Phoenix dactylifera PDK_20s1437671g003 I 0.430
est_cluster_kg.Chr_05__92__3202834:1 Micromonas sp RCC299 est_cluster_kg.Chr_05__92__3202834:1 I 0.427
EuGene.0300010215 Micromonas sp RCC299 EuGene.0300010215 I 0.427
mgf024995m Mimulus guttatus mgf024995m I 0.427
PGSC0003DMG400018099 Solanum tuberosum PGSC0003DMG400018099 I 0.424
PGSC0003DMG400001414 Solanum tuberosum PGSC0003DMG400001414 I 0.424
Solyc02g087710.2 Solanum lycopersicum Solyc02g087710.2 I 0.424
MTR_5g082570 Medicago truncatula MTR_5g082570 I 0.423
tetur02g08250 Tetranychus urticae tetur02g08250 N 0.421
PDK_20s1709771g002 Phoenix dactylifera PDK_20s1709771g002 N 0.421
ENSOGAG00000026034 Otolemur garnettii ENSOGAG00000026034 I 0.420
OSTLU_18991 Ostreococcus lucimarinus OSTLU_18991 N 0.420
ENSMMUG00000031258 Macaca mulatta ENSMMUG00000031258 I 0.419
PV06_04154 Exophiala oligosperma PV06_04154 I 0.416
PV08_04655 Exophiala spinifera PV08_04655 I 0.416
HMPREF1120_00213 Exophiala dermatitidis HMPREF1120_00213 I 0.416
A1O1_01197 Capronia coronata A1O1_01197 I 0.416
A1O7_01726 Cladophialophora yegresii A1O7_01726 I 0.416
G647_10093 Cladophialophora carrionii G647_10093 I 0.416
Z518_04911 Rhinocladiella mackenziei Z518_04911 I 0.416
PV11_09703 Exophiala sideris PV11_09703 I 0.416
PV05_09944 Exophiala xenobiotica PV05_09944 I 0.416
A1O3_08778 Capronia epimyces A1O3_08778 I 0.416