hmg-3 (Caenorhabditis elegans)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 WBGene00001973 T333269_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
C32F10.5 Sox 561 627

Links

Other Sox family TFs
Other Caenorhabditis elegans TFs

62 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CRE03995 Caenorhabditis remanei CRE03995 N 0.561
Minc01744 Meloidogyne incognita Minc01744 N 0.560
Minc10016 Meloidogyne incognita Minc10016 N 0.560
CBG04066 Caenorhabditis briggsae CBG04066 N 0.559
MhA1_Contig2971.frz3.fgene1 Meloidogyne hapla MhA1_Contig2971.frz3.fgene1 N 0.554
MhA1_Contig128.frz3.gene5 Meloidogyne hapla MhA1_Contig128.frz3.gene5 N 0.554
EVEC_0000195001 Enterobius vermicularis EVEC_0000195001 N 0.525
CBN25379 Caenorhabditis brenneri CBN25379 I 0.515
SMUV_0000856901 Syphacia muris SMUV_0000856901 N 0.513
ANCCAN_04253 Ancylostoma caninum ANCCAN_04253 N 0.490
HNAJ_0000793101 Hymenolepis nana HNAJ_0000793101 I 0.483
NECAME_16525 Necator americanus NECAME_16525 N 0.481
ANCDUO_10137 Ancylostoma duodenale ANCDUO_10137 N 0.481
hmg-4 Caenorhabditis elegans WBGene00001974 N 0.478
NBR_0000004401 Nippostrongylus brasiliensis NBR_0000004401 N 0.477
TASK_0000475801 Taenia asiatica TASK_0000475801 N 0.477
ACYPI006576 Acyrthosiphon pisum ACYPI006576 I 0.475
CBG09136 Caenorhabditis briggsae CBG09136 N 0.472
SVUK_0001798101 Strongylus vulgaris SVUK_0001798101 N 0.472
EmuJ_000894800 Echinococcus multilocularis EmuJ_000894800 N 0.466
ECANG7_00770 Echinococcus canadensis ECANG7_00770 N 0.466
scaffold98-EXSNAP2012.51 Pristionchus exspectatus scaffold98-EXSNAP2012.51 N 0.464
TTAC_0000692101 Hydatigera taeniaeformis TTAC_0000692101 N 0.464
PPA06513 Pristionchus pacificus PPA06513 N 0.464
RSKR_0000540800 Rhabditophanes kr3021 RSKR_0000540800 N 0.455
RSKR_0000171200 Rhabditophanes kr3021 RSKR_0000171200 N 0.455
HPBE_0002408301 Heligmosomoides bakeri HPBE_0002408301 I 0.454
HmN_000028000 Hymenolepis microstoma HmN_000028000 N 0.453
Minc03634 Meloidogyne incognita Minc03634 N 0.452
maker-nMf.1.1.scaf04887-augustus-gene-0.6 Meloidogyne floridensis maker-nMf.1.1.scaf04887-augustus-gene-0.6 N 0.452
Minc04648 Meloidogyne incognita Minc04648 N 0.452
MhA1_Contig400.frz3.gene18 Meloidogyne hapla MhA1_Contig400.frz3.gene18 N 0.452
LCUP005047 Lucilia cuprina LCUP005047 N 0.451
TsM_000111500 Taenia solium TsM_000111500 N 0.449
CPIJ002953 Culex quinquefasciatus CPIJ002953 N 0.448
RPRC006380 Rhodnius prolixus RPRC006380 I 0.448
CpipJ_CPIJ020011 Culex pipiens CpipJ_CPIJ020011 I 0.448
CpipJ_CPIJ002953 Culex pipiens CpipJ_CPIJ002953 N 0.448
CPIJ020011 Culex quinquefasciatus CPIJ020011 I 0.448
HCOI01420700 Haemonchus contortus HCOI01420700 N 0.446
AAEL011425 Aedes aegypti AAEL011425 I 0.446
HCOI02106600 Haemonchus contortus HCOI02106600 N 0.446
MDOA007633 Musca domestica MDOA007633 N 0.441
GK22092 Drosophila willistoni FBgn0224077 N 0.441
scaffold164-EXSNAP2012.19 Pristionchus exspectatus scaffold164-EXSNAP2012.19 N 0.431
PPA02261 Pristionchus pacificus PPA02261 N 0.431
L892_g23618 Steinernema scapterisci L892_g23618 N 0.427
L889_g16198 Steinernema feltiae L889_g16198 N 0.427
L893_g23503 Steinernema glaseri L893_g23503 N 0.427
L898_g7743 Steinernema monticolum L898_g7743 N 0.427
YQE_02071 Dendroctonus ponderosae YQE_02071 N 0.426
gw1.6.1665.1 Ostreococcus RCC809 gw1.6.1665.1 I 0.426
CJA19030 Caenorhabditis japonica CJA19030 N 0.425
RSKR_0000746900 Rhabditophanes kr3021 RSKR_0000746900 N 0.425
RSKR_0000733200 Rhabditophanes kr3021 RSKR_0000733200 N 0.425
L596_g16476 Steinernema carpocapsae L596_g16476 N 0.424
PMAA_054260 Talaromyces marneffei PMAA_054260 N 0.424
PMAA_054260 Penicillium marneffei PMAA_054260 N 0.424
LDEC020995 Leptinotarsa decemlineata LDEC020995 N 0.421
RSKR_0000472700 Rhabditophanes kr3021 RSKR_0000472700 N 0.421
EVEC_0000079801 Enterobius vermicularis EVEC_0000079801 N 0.419
PPAI002521 Phlebotomus papatasi PPAI002521 N 0.415