PPA06513 (Pristionchus pacificus)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 PPA06513 T332174_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
PPA06513 Sox 32 96

Links

Other Sox family TFs
Other Pristionchus pacificus TFs

228 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
scaffold98-EXSNAP2012.51 Pristionchus exspectatus scaffold98-EXSNAP2012.51 N 0.741
SPAL_0001085700 Strongyloides papillosus SPAL_0001085700 N 0.644
SSTP_0000585600 Strongyloides stercoralis SSTP_0000585600 N 0.644
SVE_0954900 Strongyloides venezuelensis SVE_0954900 N 0.644
PTRK_0001161700 Parastrongyloides trichosuri PTRK_0001161700 N 0.644
RSKR_0000746900 Rhabditophanes kr3021 RSKR_0000746900 N 0.639
L889_g16198 Steinernema feltiae L889_g16198 N 0.597
L898_g7743 Steinernema monticolum L898_g7743 N 0.597
RSKR_0000269500 Rhabditophanes kr3021 RSKR_0000269500 N 0.594
NBR_0000004401 Nippostrongylus brasiliensis NBR_0000004401 N 0.593
L893_g23503 Steinernema glaseri L893_g23503 N 0.591
L892_g23618 Steinernema scapterisci L892_g23618 N 0.591
ANCDUO_11856 Ancylostoma duodenale ANCDUO_11856 I 0.591
ANCDUO_24920 Ancylostoma duodenale ANCDUO_24920 I 0.591
ANCCAN_17708 Ancylostoma caninum ANCCAN_17708 I 0.591
ANCCAN_21638 Ancylostoma caninum ANCCAN_21638 I 0.591
ANCCAN_12424 Ancylostoma caninum ANCCAN_12424 I 0.591
L596_g16476 Steinernema carpocapsae L596_g16476 N 0.589
ANCDUO_10137 Ancylostoma duodenale ANCDUO_10137 N 0.587
NECAME_16525 Necator americanus NECAME_16525 N 0.587
SVUK_0001798101 Strongylus vulgaris SVUK_0001798101 N 0.587
RSKR_0000269200 Rhabditophanes kr3021 RSKR_0000269200 N 0.580
RSKR_0000128800 Rhabditophanes kr3021 RSKR_0000128800 N 0.573
ASIM_0001178701 Anisakis simplex ASIM_0001178701 N 0.571
TCNE_0001025901 Toxocara canis TCNE_0001025901 N 0.571
ASU_05994 Ascaris suum ASU_05994 N 0.571
CBN25379 Caenorhabditis brenneri CBN25379 I 0.568
L889_g29516 Steinernema feltiae L889_g29516 N 0.565
EVEC_0000079801 Enterobius vermicularis EVEC_0000079801 N 0.564
ALUE_0000365901 Ascaris lumbricoides ALUE_0000365901 N 0.564
TCNE_0000332201 Toxocara canis TCNE_0000332201 N 0.564
ASU_09087 Ascaris suum ASU_09087 N 0.564
ANCCAN_08230 Ancylostoma caninum ANCCAN_08230 I 0.563
HCOI02106600 Haemonchus contortus HCOI02106600 N 0.562
HCOI01420700 Haemonchus contortus HCOI01420700 N 0.562
HPBE_0002408301 Heligmosomoides bakeri HPBE_0002408301 I 0.562
L892_g19058 Steinernema scapterisci L892_g19058 N 0.558
L898_g4830 Steinernema monticolum L898_g4830 N 0.558
DME_0000779601 Dracunculus medinensis DME_0000779601 N 0.558
L893_g29974 Steinernema glaseri L893_g29974 N 0.558
L596_g28088 Steinernema carpocapsae L596_g28088 N 0.558
Minc04648 Meloidogyne incognita Minc04648 N 0.556
scaffold113-EXSNAP2012.49 Pristionchus exspectatus scaffold113-EXSNAP2012.49 N 0.556
maker-nMf.1.1.scaf04887-augustus-gene-0.6 Meloidogyne floridensis maker-nMf.1.1.scaf04887-augustus-gene-0.6 N 0.556
MhA1_Contig400.frz3.gene18 Meloidogyne hapla MhA1_Contig400.frz3.gene18 N 0.556
L889_g9094 Steinernema feltiae L889_g9094 N 0.556
Ppa-hmg-1.1 Pristionchus pacificus PPA22767 N 0.556
scaffold1425-EXSNAP2012.3 Pristionchus exspectatus scaffold1425-EXSNAP2012.3 N 0.556
Minc03634 Meloidogyne incognita Minc03634 N 0.556
CJA04355 Caenorhabditis japonica CJA04355 N 0.554
SVE_0294800 Strongyloides venezuelensis SVE_0294800 N 0.553
SSTP_0001024100 Strongyloides stercoralis SSTP_0001024100 N 0.553
SPAL_0000986100 Strongyloides papillosus SPAL_0000986100 N 0.553
CRE11852 Caenorhabditis remanei CRE11852 N 0.548
ANCDUO_26276 Ancylostoma duodenale ANCDUO_26276 N 0.547
hmg-1.1 Caenorhabditis elegans WBGene00001971 N 0.546
nOo.2.0.1.g04693 Onchocerca ochengi nOo.2.0.1.g04693 N 0.545
nLs.2.1.2.g04082 Litomosoides sigmodontis nLs.2.1.2.g04082 N 0.545
nDi.2.2.2.g08508 Dirofilaria immitis nDi.2.2.2.g08508 N 0.545
WBGene00238628 Onchocerca volvulus WBGene00238628 N 0.545
LOAG_08062 Loa loa LOAG_08062 N 0.545
Bm8632 Brugia malayi Bm8632 N 0.545
nAv.1.0.1.g08227 Acanthocheilonema viteae nAv.1.0.1.g08227 N 0.545
HmN_000028000 Hymenolepis microstoma HmN_000028000 N 0.541
ACAC_0000817201 Angiostrongylus cantonensis ACAC_0000817201 N 0.535
HPLM_0001324601 Haemonchus placei HPLM_0001324601 N 0.535
DICVIV_05502 Dictyocaulus viviparus DICVIV_05502 N 0.535
HCOI01550200 Haemonchus contortus HCOI01550200 N 0.535
ACOC_0000235301 Angiostrongylus costaricensis ACOC_0000235301 N 0.535
OESDEN_09619 Oesophagostomum dentatum OESDEN_09619 N 0.535
ANCCEY_04224 Ancylostoma ceylanicum ANCCEY_04224 N 0.535
NBR_0001277401 Nippostrongylus brasiliensis NBR_0001277401 N 0.535
NECAME_17555 Necator americanus NECAME_17555 N 0.535
NECAME_17981 Necator americanus NECAME_17981 N 0.535
ANCDUO_12352 Ancylostoma duodenale ANCDUO_12352 N 0.535
BXY_1081900 Bursaphelenchus xylophilus BXY_1081900 I 0.535
ANCCAN_04253 Ancylostoma caninum ANCCAN_04253 N 0.535
TELCIR_02603 Teladorsagia circumcincta TELCIR_02603 N 0.535
hmg-4 Caenorhabditis elegans WBGene00001974 N 0.535
CBG04066 Caenorhabditis briggsae CBG04066 N 0.534
SMUV_0000499601 Syphacia muris SMUV_0000499601 N 0.533
HPBE_0002310801 Heligmosomoides bakeri HPBE_0002310801 N 0.529
CBG09136 Caenorhabditis briggsae CBG09136 N 0.528
BXY_1081800 Bursaphelenchus xylophilus BXY_1081800 I 0.526
ASU_05752 Ascaris suum ASU_05752 N 0.519
ALUE_0000448701 Ascaris lumbricoides ALUE_0000448701 N 0.519
nDi.2.2.2.g04713 Dirofilaria immitis nDi.2.2.2.g04713 N 0.519
nLs.2.1.2.g02941 Litomosoides sigmodontis nLs.2.1.2.g02941 N 0.519
CRE03995 Caenorhabditis remanei CRE03995 N 0.518
PTRK_0001490800 Parastrongyloides trichosuri PTRK_0001490800 N 0.518
scaffold164-EXSNAP2012.19 Pristionchus exspectatus scaffold164-EXSNAP2012.19 N 0.516
PPA02261 Pristionchus pacificus PPA02261 N 0.516
HCOI00417600 Haemonchus contortus HCOI00417600 N 0.515
TELCIR_22690 Teladorsagia circumcincta TELCIR_22690 N 0.515
TELCIR_05217 Teladorsagia circumcincta TELCIR_05217 N 0.515
HPLM_0000803901 Haemonchus placei HPLM_0000803901 N 0.515
RSKR_0000587700 Rhabditophanes kr3021 RSKR_0000587700 N 0.514
EVEC_0000171701 Enterobius vermicularis EVEC_0000171701 N 0.514
Bm6643 Brugia malayi Bm6643 N 0.510
NBR_0001132501 Nippostrongylus brasiliensis NBR_0001132501 N 0.510
DICVIV_01337 Dictyocaulus viviparus DICVIV_01337 N 0.510
Bm2524 Brugia malayi Bm2524 N 0.510
SVUK_0001398701 Strongylus vulgaris SVUK_0001398701 N 0.510
ANCCAN_21637 Ancylostoma caninum ANCCAN_21637 N 0.510
ANCDUO_11855 Ancylostoma duodenale ANCDUO_11855 N 0.510
ANCCEY_10464 Ancylostoma ceylanicum ANCCEY_10464 N 0.510
NECAME_10840 Necator americanus NECAME_10840 N 0.510
ALUE_0000605501 Ascaris lumbricoides ALUE_0000605501 N 0.506
ASU_07820 Ascaris suum ASU_07820 N 0.506
ACAC_0000857301 Angiostrongylus cantonensis ACAC_0000857301 N 0.505
ACOC_0000653601 Angiostrongylus costaricensis ACOC_0000653601 N 0.505
WUBG_03677 Wuchereria bancrofti WUBG_03677 N 0.504
GPUH_0001539601 Gongylonema pulchrum GPUH_0001539601 N 0.504
GPUH_0001272801 Gongylonema pulchrum GPUH_0001272801 N 0.504
EEL_0000829801 Elaeophora elaphi EEL_0000829801 N 0.504
nAv.1.0.1.g03971 Acanthocheilonema viteae nAv.1.0.1.g03971 N 0.504
nLs.2.1.2.g07238 Litomosoides sigmodontis nLs.2.1.2.g07238 N 0.504
LOAG_04347 Loa loa LOAG_04347 N 0.504
nDi.2.2.2.g07477 Dirofilaria immitis nDi.2.2.2.g07477 N 0.504
nOo.2.0.1.g02324 Onchocerca ochengi nOo.2.0.1.g02324 N 0.504
OFLC_0000770701 Onchocerca flexuosa OFLC_0000770701 N 0.504
WBGene00244511 Onchocerca volvulus WBGene00244511 N 0.504
L596_g8199 Steinernema carpocapsae L596_g8199 N 0.503
L892_g2503 Steinernema scapterisci L892_g2503 N 0.503
gw1.6.1665.1 Ostreococcus RCC809 gw1.6.1665.1 I 0.499
TCLT_0000097001 Thelazia callipaeda TCLT_0000097001 N 0.498
SPAL_0001421900 Strongyloides papillosus SPAL_0001421900 N 0.495
SVE_0536900 Strongyloides venezuelensis SVE_0536900 N 0.495
PTRK_0000111400 Parastrongyloides trichosuri PTRK_0000111400 N 0.495
OSTLU_31946 Ostreococcus lucimarinus OSTLU_31946 I 0.494
HNAJ_0000793101 Hymenolepis nana HNAJ_0000793101 I 0.494
Hba_18326 Heterorhabditis bacteriophora Hba_18326 I 0.489
EmuJ_000894800 Echinococcus multilocularis EmuJ_000894800 N 0.488
ECANG7_00770 Echinococcus canadensis ECANG7_00770 N 0.488
SSTP_0000790100 Strongyloides stercoralis SSTP_0000790100 N 0.488
ASIM_0001147101 Anisakis simplex ASIM_0001147101 N 0.487
TTAC_0000692101 Hydatigera taeniaeformis TTAC_0000692101 N 0.486
TASK_0000475801 Taenia asiatica TASK_0000475801 N 0.486
HDID_0000239001 Hymenolepis diminuta HDID_0000239001 N 0.484
OSTLU_18991 Ostreococcus lucimarinus OSTLU_18991 N 0.480
HPBE_0001796801 Heligmosomoides bakeri HPBE_0001796801 N 0.480
ASIM_0000156001 Anisakis simplex ASIM_0000156001 N 0.479
CapteG172235 Capitella teleta CapteG172235 I 0.473
CJA19030 Caenorhabditis japonica CJA19030 N 0.473
L889_g6592 Steinernema feltiae L889_g6592 N 0.472
GPUH_0000029001 Gongylonema pulchrum GPUH_0000029001 N 0.467
SSLN_0000125101 Schistocephalus solidus SSLN_0000125101 N 0.465
GK22092 Drosophila willistoni FBgn0224077 N 0.464
L596_g20063 Steinernema carpocapsae L596_g20063 N 0.464
hmg-3 Caenorhabditis elegans WBGene00001973 N 0.464
GA14726 Drosophila pseudoobscura FBgn0074753 I 0.463
GL17523 Drosophila persimilis FBgn0155126 I 0.463
PPAI002522 Phlebotomus papatasi PPAI002522 I 0.461
tetur02g08250 Tetranychus urticae tetur02g08250 N 0.460
TsM_000111500 Taenia solium TsM_000111500 N 0.459
L898_g23313 Steinernema monticolum L898_g23313 N 0.458
GG20749 Drosophila erecta FBgn0112936 I 0.454
GK15658 Drosophila willistoni FBgn0217663 I 0.454
GF11622 Drosophila ananassae FBgn0088662 I 0.454
HmgZ Drosophila yakuba FBgn0068145 I 0.454
GH20784 Drosophila grimshawi FBgn0128247 I 0.454
GJ20604 Drosophila virilis FBgn0207743 I 0.454
GM15692 Drosophila sechellia FBgn0170608 I 0.454
HmgZ Drosophila melanogaster FBgn0010228 I 0.454
GI20867 Drosophila mojavensis FBgn0143601 I 0.454
GD25171 Drosophila simulans FBgn0196483 I 0.454
RSKR_0000733200 Rhabditophanes kr3021 RSKR_0000733200 N 0.453
DME_0000590001 Dracunculus medinensis DME_0000590001 N 0.452
PHUM125270 Pediculus humanus PHUM125270 N 0.452
ECPE_0001309901 Echinostoma caproni ECPE_0001309901 N 0.452
ANCDUO_24269 Ancylostoma duodenale ANCDUO_24269 N 0.450
MDOA014797 Musca domestica MDOA014797 I 0.448
GL11071 Drosophila persimilis FBgn0148681 N 0.447
Ssrp Drosophila pseudoobscura FBgn0078456 N 0.447
LOAG_14354 Loa loa LOAG_14354 N 0.445
SMTD_0001155301 Schistosoma mattheei SMTD_0001155301 N 0.439
A_01848 Schistosoma haematobium A_01848 N 0.439
SCUD_0000070901 Schistosoma curassoni SCUD_0000070901 N 0.439
Smp_148930 Schistosoma mansoni Smp_148930 N 0.439
Sjc_0035580 Schistosoma japonicum Sjc_0035580 N 0.439
ASIM_0000114801 Anisakis simplex ASIM_0000114801 N 0.436
ANCCAN_19939 Ancylostoma caninum ANCCAN_19939 N 0.436
ALUE_0001798401 Ascaris lumbricoides ALUE_0001798401 N 0.436
ASU_13985 Ascaris suum ASU_13985 N 0.436
TCNE_0001783901 Toxocara canis TCNE_0001783901 N 0.436
MDOA007633 Musca domestica MDOA007633 N 0.435
BGIBMGA005288 Bombyx mori BGIBMGA005288 N 0.431
LCUP016801 Lucilia cuprina LCUP016801 N 0.431
HMEL015307 Heliconius melpomene HMEL015307 N 0.431
Bcin01g08840 Botrytis cinerea Bcin01g08840 I 0.430
GD11622 Drosophila simulans FBgn0183362 N 0.429
GG22136 Drosophila erecta FBgn0114310 N 0.429
HmgD Drosophila melanogaster FBgn0004362 N 0.429
GJ21748 Drosophila virilis FBgn0208866 N 0.429
GH21124 Drosophila grimshawi FBgn0128586 N 0.429
GK15924 Drosophila willistoni FBgn0217926 N 0.429
GM15859 Drosophila sechellia FBgn0170775 N 0.429
TriadG64155 Trichoplax adhaerens TriadG64155 I 0.429
GI18728 Drosophila mojavensis FBgn0141467 N 0.429
GL16947 Drosophila persimilis FBgn0154551 N 0.429
GA30453 Drosophila pseudoobscura FBgn0264590 N 0.429
GF13265 Drosophila ananassae FBgn0090297 N 0.429
HmgD Drosophila yakuba FBgn0068146 N 0.429
GM13209 Drosophila sechellia FBgn0168140 N 0.428
BXY_0253100 Bursaphelenchus xylophilus BXY_0253100 N 0.425
L892_g15959 Steinernema scapterisci L892_g15959 N 0.424
CBG20663 Caenorhabditis briggsae CBG20663 N 0.423
GI18750 Drosophila mojavensis FBgn0141489 N 0.421
ACYPI006576 Acyrthosiphon pisum ACYPI006576 I 0.420
Ssrp Drosophila melanogaster FBgn0010278 N 0.420
GF12460 Drosophila ananassae FBgn0089497 N 0.420
GD25013 Drosophila simulans FBgn0196325 N 0.420
GG19998 Drosophila erecta FBgn0112197 N 0.420
GE11532 Drosophila yakuba FBgn0229332 N 0.420
estExt_fgenesh1_pg.C_2230007 Physcomitrella patens estExt_fgenesh1_pg.C_2230007 I 0.418
ACAC_0000798501 Angiostrongylus cantonensis ACAC_0000798501 N 0.418
ACOC_0001190001 Angiostrongylus costaricensis ACOC_0001190001 N 0.418
ETH_00031100 Eimeria tenella ETH_00031100 I 0.417
SMUV_0000634201 Syphacia muris SMUV_0000634201 N 0.417
csin108029 Clonorchis sinensis csin108029 N 0.417
T265_15460 Opisthorchis viverrini T265_15460 N 0.417
OFLC_0000496201 Onchocerca flexuosa OFLC_0000496201 N 0.416
WBGene00237022 Onchocerca volvulus WBGene00237022 N 0.416
BTMF_0000229601 Brugia timori BTMF_0000229601 N 0.416
WUBG_02390 Wuchereria bancrofti WUBG_02390 N 0.416
nAv.1.0.1.g09805 Acanthocheilonema viteae nAv.1.0.1.g09805 N 0.416
nOo.2.0.1.g01970 Onchocerca ochengi nOo.2.0.1.g01970 N 0.416
EEL_0000629001 Elaeophora elaphi EEL_0000629001 N 0.416