CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CJA19030
(
Caenorhabditis japonica
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
CJA19030
T327074_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CJA19030
Sox
557
623
PKGASSAYILWFSANRLSLKKDGDSVADVAKKGGEQWKKLTAEDKKEWEAKAAKDKARYEAEMKEYR
Links
Other
Sox
family TFs
Other
Caenorhabditis japonica
TFs
168 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CBG09136
Caenorhabditis briggsae
CBG09136
N
0.627
CBN25379
Caenorhabditis brenneri
CBN25379
I
0.622
hmg-4
Caenorhabditis elegans
WBGene00001974
N
0.615
HPBE_0002408301
Heligmosomoides bakeri
HPBE_0002408301
I
0.557
Minc04648
Meloidogyne incognita
Minc04648
N
0.554
MhA1_Contig400.frz3.gene18
Meloidogyne hapla
MhA1_Contig400.frz3.gene18
N
0.554
maker-nMf.1.1.scaf04887-augustus-gene-0.6
Meloidogyne floridensis
maker-nMf.1.1.scaf04887-augustus-gene-0.6
N
0.554
CRE03995
Caenorhabditis remanei
CRE03995
N
0.554
Minc03634
Meloidogyne incognita
Minc03634
N
0.554
NBR_0000004401
Nippostrongylus brasiliensis
NBR_0000004401
N
0.549
CBG04066
Caenorhabditis briggsae
CBG04066
N
0.540
HCOI02106600
Haemonchus contortus
HCOI02106600
N
0.519
ANCDUO_10137
Ancylostoma duodenale
ANCDUO_10137
N
0.519
NECAME_16525
Necator americanus
NECAME_16525
N
0.519
HCOI01420700
Haemonchus contortus
HCOI01420700
N
0.519
SVUK_0001798101
Strongylus vulgaris
SVUK_0001798101
N
0.511
ANCDUO_24920
Ancylostoma duodenale
ANCDUO_24920
I
0.507
ANCCAN_17708
Ancylostoma caninum
ANCCAN_17708
I
0.507
ANCCAN_12424
Ancylostoma caninum
ANCCAN_12424
I
0.507
ANCCAN_21638
Ancylostoma caninum
ANCCAN_21638
I
0.507
ANCDUO_11856
Ancylostoma duodenale
ANCDUO_11856
I
0.507
nOo.2.0.1.g02324
Onchocerca ochengi
nOo.2.0.1.g02324
N
0.503
GPUH_0001539601
Gongylonema pulchrum
GPUH_0001539601
N
0.503
GPUH_0001272801
Gongylonema pulchrum
GPUH_0001272801
N
0.503
WBGene00244511
Onchocerca volvulus
WBGene00244511
N
0.503
RSKR_0000733200
Rhabditophanes kr3021
RSKR_0000733200
N
0.501
SSTP_0000790100
Strongyloides stercoralis
SSTP_0000790100
N
0.500
BXY_1081800
Bursaphelenchus xylophilus
BXY_1081800
I
0.500
BXY_1081900
Bursaphelenchus xylophilus
BXY_1081900
I
0.497
SPAL_0001421900
Strongyloides papillosus
SPAL_0001421900
N
0.494
SVE_0536900
Strongyloides venezuelensis
SVE_0536900
N
0.494
EEL_0000829801
Elaeophora elaphi
EEL_0000829801
N
0.490
OFLC_0000770701
Onchocerca flexuosa
OFLC_0000770701
N
0.490
nLs.2.1.2.g07238
Litomosoides sigmodontis
nLs.2.1.2.g07238
N
0.490
nAv.1.0.1.g03971
Acanthocheilonema viteae
nAv.1.0.1.g03971
N
0.490
LOAG_04347
Loa loa
LOAG_04347
N
0.490
WUBG_03677
Wuchereria bancrofti
WUBG_03677
N
0.490
nDi.2.2.2.g07477
Dirofilaria immitis
nDi.2.2.2.g07477
N
0.490
Bm2524
Brugia malayi
Bm2524
N
0.490
PTRK_0000111400
Parastrongyloides trichosuri
PTRK_0000111400
N
0.481
L889_g29516
Steinernema feltiae
L889_g29516
N
0.480
scaffold164-EXSNAP2012.19
Pristionchus exspectatus
scaffold164-EXSNAP2012.19
N
0.480
PPA02261
Pristionchus pacificus
PPA02261
N
0.480
ANCCAN_08230
Ancylostoma caninum
ANCCAN_08230
I
0.479
HDID_0000239001
Hymenolepis diminuta
HDID_0000239001
N
0.476
scaffold98-EXSNAP2012.51
Pristionchus exspectatus
scaffold98-EXSNAP2012.51
N
0.473
PPA06513
Pristionchus pacificus
PPA06513
N
0.473
ANCDUO_26276
Ancylostoma duodenale
ANCDUO_26276
N
0.464
TCNE_0001783901
Toxocara canis
TCNE_0001783901
N
0.463
ASU_13985
Ascaris suum
ASU_13985
N
0.463
ALUE_0001798401
Ascaris lumbricoides
ALUE_0001798401
N
0.463
ASIM_0000114801
Anisakis simplex
ASIM_0000114801
N
0.463
RSKR_0000128800
Rhabditophanes kr3021
RSKR_0000128800
N
0.462
gw1.6.1665.1
Ostreococcus RCC809
gw1.6.1665.1
I
0.456
TCLT_0000097001
Thelazia callipaeda
TCLT_0000097001
N
0.456
SSLN_0000125101
Schistocephalus solidus
SSLN_0000125101
N
0.446
L892_g23618
Steinernema scapterisci
L892_g23618
N
0.446
L889_g16198
Steinernema feltiae
L889_g16198
N
0.446
L898_g7743
Steinernema monticolum
L898_g7743
N
0.446
L893_g23503
Steinernema glaseri
L893_g23503
N
0.446
Hba_18326
Heterorhabditis bacteriophora
Hba_18326
I
0.445
L596_g16476
Steinernema carpocapsae
L596_g16476
N
0.444
EVEC_0000195001
Enterobius vermicularis
EVEC_0000195001
N
0.443
PPAI002522
Phlebotomus papatasi
PPAI002522
I
0.438
SSTP_0000585600
Strongyloides stercoralis
SSTP_0000585600
N
0.437
SVE_0954900
Strongyloides venezuelensis
SVE_0954900
N
0.437
SPAL_0001085700
Strongyloides papillosus
SPAL_0001085700
N
0.437
PTRK_0001161700
Parastrongyloides trichosuri
PTRK_0001161700
N
0.437
NBR_0001277401
Nippostrongylus brasiliensis
NBR_0001277401
N
0.436
HPLM_0001324601
Haemonchus placei
HPLM_0001324601
N
0.436
NECAME_17555
Necator americanus
NECAME_17555
N
0.436
ACAC_0000817201
Angiostrongylus cantonensis
ACAC_0000817201
N
0.436
DICVIV_05502
Dictyocaulus viviparus
DICVIV_05502
N
0.436
TELCIR_02603
Teladorsagia circumcincta
TELCIR_02603
N
0.436
HCOI01550200
Haemonchus contortus
HCOI01550200
N
0.436
ACOC_0000235301
Angiostrongylus costaricensis
ACOC_0000235301
N
0.436
NECAME_17981
Necator americanus
NECAME_17981
N
0.436
ANCDUO_12352
Ancylostoma duodenale
ANCDUO_12352
N
0.436
OESDEN_09619
Oesophagostomum dentatum
OESDEN_09619
N
0.436
ANCCEY_04224
Ancylostoma ceylanicum
ANCCEY_04224
N
0.436
HmgZ
Drosophila melanogaster
FBgn0010228
I
0.435
HmgZ
Drosophila yakuba
FBgn0068145
I
0.435
ASIM_0001178701
Anisakis simplex
ASIM_0001178701
N
0.435
GM15692
Drosophila sechellia
FBgn0170608
I
0.435
GD25171
Drosophila simulans
FBgn0196483
I
0.435
GK15658
Drosophila willistoni
FBgn0217663
I
0.435
GF11622
Drosophila ananassae
FBgn0088662
I
0.435
TCNE_0001025901
Toxocara canis
TCNE_0001025901
N
0.435
GG20749
Drosophila erecta
FBgn0112936
I
0.435
ASU_05994
Ascaris suum
ASU_05994
N
0.435
RSKR_0000746900
Rhabditophanes kr3021
RSKR_0000746900
N
0.434
TELCIR_22690
Teladorsagia circumcincta
TELCIR_22690
N
0.432
TELCIR_05217
Teladorsagia circumcincta
TELCIR_05217
N
0.432
NBR_0001132501
Nippostrongylus brasiliensis
NBR_0001132501
N
0.432
NECAME_10840
Necator americanus
NECAME_10840
N
0.432
HPBE_0002310801
Heligmosomoides bakeri
HPBE_0002310801
N
0.432
SVUK_0001398701
Strongylus vulgaris
SVUK_0001398701
N
0.432
HPLM_0000803901
Haemonchus placei
HPLM_0000803901
N
0.432
DICVIV_01337
Dictyocaulus viviparus
DICVIV_01337
N
0.432
ANCDUO_11855
Ancylostoma duodenale
ANCDUO_11855
N
0.432
ANCCEY_10464
Ancylostoma ceylanicum
ANCCEY_10464
N
0.432
ANCCAN_21637
Ancylostoma caninum
ANCCAN_21637
N
0.432
HCOI00417600
Haemonchus contortus
HCOI00417600
N
0.432
WBGene00238628
Onchocerca volvulus
WBGene00238628
N
0.431
nDi.2.2.2.g08508
Dirofilaria immitis
nDi.2.2.2.g08508
N
0.431
nAv.1.0.1.g08227
Acanthocheilonema viteae
nAv.1.0.1.g08227
N
0.431
nLs.2.1.2.g04082
Litomosoides sigmodontis
nLs.2.1.2.g04082
N
0.431
GJ20604
Drosophila virilis
FBgn0207743
I
0.431
GA14726
Drosophila pseudoobscura
FBgn0074753
I
0.431
Bm8632
Brugia malayi
Bm8632
N
0.431
GH20784
Drosophila grimshawi
FBgn0128247
I
0.431
GI20867
Drosophila mojavensis
FBgn0143601
I
0.431
GL17523
Drosophila persimilis
FBgn0155126
I
0.431
LOAG_08062
Loa loa
LOAG_08062
N
0.431
nOo.2.0.1.g04693
Onchocerca ochengi
nOo.2.0.1.g04693
N
0.431
SMUV_0000856901
Syphacia muris
SMUV_0000856901
N
0.430
L898_g4830
Steinernema monticolum
L898_g4830
N
0.430
L892_g26355
Steinernema scapterisci
L892_g26355
N
0.430
L892_g15959
Steinernema scapterisci
L892_g15959
N
0.430
L892_g19058
Steinernema scapterisci
L892_g19058
N
0.430
L596_g28088
Steinernema carpocapsae
L596_g28088
N
0.430
L893_g29974
Steinernema glaseri
L893_g29974
N
0.430
DME_0000779601
Dracunculus medinensis
DME_0000779601
N
0.430
CPIJ020011
Culex quinquefasciatus
CPIJ020011
I
0.428
TCNE_0000332201
Toxocara canis
TCNE_0000332201
N
0.428
CpipJ_CPIJ020011
Culex pipiens
CpipJ_CPIJ020011
I
0.428
L889_g9094
Steinernema feltiae
L889_g9094
N
0.428
ALUE_0000365901
Ascaris lumbricoides
ALUE_0000365901
N
0.428
ASU_09087
Ascaris suum
ASU_09087
N
0.428
NEMVEDRAFT_v1g59568
Nematostella vectensis
NEMVEDRAFT_v1g59568
N
0.427
BXY_0253100
Bursaphelenchus xylophilus
BXY_0253100
N
0.427
GL16947
Drosophila persimilis
FBgn0154551
N
0.426
GI18728
Drosophila mojavensis
FBgn0141467
N
0.426
GJ21748
Drosophila virilis
FBgn0208866
N
0.426
HmgD
Drosophila yakuba
FBgn0068146
N
0.426
GM15859
Drosophila sechellia
FBgn0170775
N
0.426
GH21124
Drosophila grimshawi
FBgn0128586
N
0.426
GD11622
Drosophila simulans
FBgn0183362
N
0.426
GA30453
Drosophila pseudoobscura
FBgn0264590
N
0.426
TriadG64155
Trichoplax adhaerens
TriadG64155
I
0.426
CJA04355
Caenorhabditis japonica
CJA04355
N
0.426
GG22136
Drosophila erecta
FBgn0114310
N
0.426
GF13265
Drosophila ananassae
FBgn0090297
N
0.426
CRE11852
Caenorhabditis remanei
CRE11852
N
0.426
GK15924
Drosophila willistoni
FBgn0217926
N
0.426
HmgD
Drosophila melanogaster
FBgn0004362
N
0.426
hmg-3
Caenorhabditis elegans
WBGene00001973
N
0.425
MDOA014797
Musca domestica
MDOA014797
I
0.425
TASK_0000475801
Taenia asiatica
TASK_0000475801
N
0.425
GM13209
Drosophila sechellia
FBgn0168140
N
0.425
hmg-1.1
Caenorhabditis elegans
WBGene00001971
N
0.424
RSKR_0000269200
Rhabditophanes kr3021
RSKR_0000269200
N
0.423
ANCCAN_04253
Ancylostoma caninum
ANCCAN_04253
N
0.422
ACAC_0000857301
Angiostrongylus cantonensis
ACAC_0000857301
N
0.421
ACOC_0000653601
Angiostrongylus costaricensis
ACOC_0000653601
N
0.421
ASIM_0001147101
Anisakis simplex
ASIM_0001147101
N
0.421
nDi.2.2.2.g04713
Dirofilaria immitis
nDi.2.2.2.g04713
N
0.420
nLs.2.1.2.g02941
Litomosoides sigmodontis
nLs.2.1.2.g02941
N
0.420
CLEC003860
Cimex lectularius
CLEC003860
I
0.417
HPBE_0001796801
Heligmosomoides bakeri
HPBE_0001796801
N
0.417
SVE_0294800
Strongyloides venezuelensis
SVE_0294800
N
0.417
PTRK_0001490800
Parastrongyloides trichosuri
PTRK_0001490800
N
0.417
SSTP_0001024100
Strongyloides stercoralis
SSTP_0001024100
N
0.417
SPAL_0000986100
Strongyloides papillosus
SPAL_0000986100
N
0.417
EVEC_0000171701
Enterobius vermicularis
EVEC_0000171701
N
0.416
scaffold1425-EXSNAP2012.3
Pristionchus exspectatus
scaffold1425-EXSNAP2012.3
N
0.415
Ppa-hmg-1.1
Pristionchus pacificus
PPA22767
N
0.415
scaffold113-EXSNAP2012.49
Pristionchus exspectatus
scaffold113-EXSNAP2012.49
N
0.415