CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SAKL0G09768g
(
Lachancea kluyveri
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00172 (Zn_clus)
IPR001138
SAKL0G09768g
T392258_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
RSC3
M00082_2.00
Saccharomyces cerevisiae
GCGCGCGG
CCGCGCGC
PBM
Badis et al.(2008)
RSC3_2035
0.577
0.833
RSC3
M01576_2.00
Saccharomyces cerevisiae
NNNNNSCGNN
NNCGSNNNNN
PBM
Zhu et al.(2009)
Rsc3
0.577
0.833
RSC3
M07509_2.00
Saccharomyces cerevisiae
NNVCGCG
CGCGBNN
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0374.1
0.577
0.833
RSC3
M08655_2.00
Saccharomyces cerevisiae
NNVCGCG
CGCGBNN
Misc
DeBoer et al.(2011)
YDR303C_580
0.577
0.833
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SAKL0G09768g
Zinc cluster
14
50
PACVQCRKRKIGCDRAKPICGNCLRNGKNDCFYPDVP
Links
Other
Zinc cluster
family TFs
Other
Lachancea kluyveri
TFs
21 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Ecym_3200
Eremothecium cymbalariae
Ecym_3200
I
0.669
AGOS_AAL057C
Ashbya gossypii
AGOS_AAL057C
I
0.637
AACERI_AaceriAAL057C
Saccharomycetaceae sp ashbya aceri
AACERI_AaceriAAL057C
I
0.637
Kpol_1023p41
Vanderwaltozyma polyspora
Kpol_1023p41
I
0.580
TDEL_0E03050
Torulaspora delbrueckii
TDEL_0E03050
I
0.578
RSC3
Saccharomyces cerevisiae
YDR303C
D
0.577
4855_Multiple
Saccharomyces paradoxus
4855_Multiple
I
0.577
4894_YDR303C
Saccharomyces bayanus
4894_YDR303C
I
0.577
Scas_Contig588.11
Saccharomyces castellii
Scas_Contig588.11
I
0.577
SU7_2665
Saccharomyces arboricola
SU7_2665
I
0.577
NCAS_0F02700
Naumovozyma castellii
NCAS_0F02700
I
0.577
Kpol_1005p2
Vanderwaltozyma polyspora
Kpol_1005p2
I
0.577
NDAI_0C04170
Naumovozyma dairenensis
NDAI_0C04170
I
0.577
CAGL0D03850g
Candida glabrata
CAGL0D03850g
N
0.577
SKUD_196709
Saccharomyces kudriavzevii
SKUD_196709
I
0.577
TPHA_0E01290
Tetrapisispora phaffii
TPHA_0E01290
I
0.572
KAFR_0E01300
Kazachstania africana
KAFR_0E01300
I
0.570
ZYRO0C13882g
Zygosaccharomyces rouxii
ZYRO0C13882g
I
0.561
ZBAI_03963
Zygosaccharomyces bailii
ZBAI_03963
I
0.553
ZBAI_09770
Zygosaccharomyces bailii
ZBAI_09770
I
0.553
TBLA_0C03390
Tetrapisispora blattae
TBLA_0C03390
I
0.541