Lus10014345.g (Linum usitatissimum)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Lus10014345.g T008795_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Lus10014345 AP2 73 124

Links

Other AP2 family TFs
Other Linum usitatissimum TFs

68 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
27446.m000475 Ricinus communis 27446.m000475 I 0.798
AMTR_s00026p00180130 Amborella trichopoda AMTR_s00026p00180130 I 0.801
ERF084 Arabidopsis thaliana AT1G80580 N 0.776
BGIOSGA019608 Oryza indica BGIOSGA019608 N 0.726
Bo2g095830 Brassica oleracea Bo2g095830 N 0.754
Bostr.20129s0456 Boechera stricta Bostr.20129s0456 N 0.776
Bra008460 Brassica rapa Bra008460 N 0.801
Cagra.1725s0082 Capsella grandiflora Cagra.1725s0082 N 0.776
Carubv10022119m.g Capsella rubella Carubv10022119m.g N 0.776
cassava38416.m1 Manihot esculenta cassava38416.m1 I 0.798
Ca_05803 Cicer arietinum Ca_05803 I 0.684
Ca_20041 Cicer arietinum Ca_20041 I 0.788
Ciclev10027171m.g Citrus clementina Ciclev10027171m.g I 0.813
Cla004992 Citrullus lanatus Cla004992 I 0.698
Cla015583 Citrullus lanatus Cla015583 I 0.798
Cucsa.105790 Cucumis sativus Cucsa.105790 I 0.798
Cucsa.201950 Cucumis sativus Cucsa.201950 I 0.706
Eucgr.F03941 Eucalyptus grandis Eucgr.F03941 N 0.816
evm.TU.supercontig_10.125 Carica papaya evm.TU.supercontig_10.125 I 0.797
e_gw1.14.213.1 Physcomitrella patens e_gw1.14.213.1 N 0.743
e_gw1.145.79.1 Physcomitrella patens e_gw1.145.79.1 N 0.760
e_gw1.15.234.1 Physcomitrella patens e_gw1.15.234.1 N 0.746
e_gw1.276.69.1 Physcomitrella patens e_gw1.276.69.1 N 0.746
fgenesh1_pg.scaffold_23000002 Physcomitrella patens fgenesh1_pg.scaffold_23000002 I 0.739
fgenesh1_pm.C_scaffold_2001935 Arabidopsis lyrata fgenesh1_pm.C_scaffold_2001935 N 0.776
gene15953-v1.0-hybrid Fragaria vesca gene15953-v1.0-hybrid I 0.823
GLYMA01G43350 Glycine max GLYMA01G43350 I 0.677
GLYMA07G03041 Glycine max GLYMA07G03041 I 0.794
GLYMA08G23074 Glycine max GLYMA08G23074 I 0.800
Gorai.004G220800 Gossypium raimondii Gorai.004G220800 I 0.680
Gorai.006G107500 Gossypium raimondii Gorai.006G107500 I 0.797
Gorai.009G125700 Gossypium raimondii Gorai.009G125700 N 0.812
GSMUA_Achr11G19880_001 Musa acuminata GSMUA_Achr11G19880_001 I 0.678
GSMUA_Achr1G25890_001 Musa acuminata GSMUA_Achr1G25890_001 I 0.681
GSMUA_Achr7G03640_001 Musa acuminata GSMUA_Achr7G03640_001 I 0.684
GSMUA_AchrUn_randomG16100_001 Musa acuminata GSMUA_AchrUn_randomG16100_001 I 0.697
gw1.204.54.1 Physcomitrella patens gw1.204.54.1 N 0.751
gw1.340.39.1 Physcomitrella patens gw1.340.39.1 N 0.689
Lus10006579.g Linum usitatissimum Lus10006579.g I 0.677
Lus10026053.g Linum usitatissimum Lus10026053.g N 0.859
MDP0000264187 Malus domestica MDP0000264187 I 0.816
mgf023662m Mimulus guttatus mgf023662m I 0.797
MTR_4g009260 Medicago truncatula MTR_4g009260 I 0.813
OMERI05G10040 Oryza meridionalis OMERI05G10040 N 0.726
ONIVA05G11840 Oryza nivara ONIVA05G11840 N 0.726
orange1.1g047950m.g Citrus sinensis orange1.1g047950m.g I 0.813
ORUFI05G12300 Oryza rufipogon ORUFI05G12300 N 0.726
OS05G0316800 Oryza sativa OS05G0316800 N 0.726
PGSC0003DMG400000091 Solanum tuberosum PGSC0003DMG400000091 I 0.706
PGSC0003DMG400010135 Solanum tuberosum PGSC0003DMG400010135 N 0.741
Pm013734 Prunus mume Pm013734 I 0.816
POPTR_0001s32050 Populus trichocarpa POPTR_0001s32050 I 0.798
POPTR_0013s15440 Populus trichocarpa POPTR_0013s15440 I 0.740
POPTR_0017s08090 Populus trichocarpa POPTR_0017s08090 I 0.803
PRUPE_ppa020928mg Prunus persica PRUPE_ppa020928mg I 0.822
SapurV1A.0058s0710 Salix purpurea SapurV1A.0058s0710 I 0.798
SapurV1A.1000s0130 Salix purpurea SapurV1A.1000s0130 I 0.797
SELMODRAFT_412693 Selaginella moellendorffii SELMODRAFT_412693 N 0.751
SELMODRAFT_417258 Selaginella moellendorffii SELMODRAFT_417258 N 0.751
SELMODRAFT_428344 Selaginella moellendorffii SELMODRAFT_428344 N 0.748
SELMODRAFT_428599 Selaginella moellendorffii SELMODRAFT_428599 N 0.748
Solyc01g095500.2 Solanum lycopersicum Solyc01g095500.2 I 0.724
Solyc03g006320.1 Solanum lycopersicum Solyc03g006320.1 I 0.684
Solyc03g117230.1 Solanum lycopersicum Solyc03g117230.1 N 0.777
TCM_027348 Theobroma cacao TCM_027348 I 0.803
Thhalv10000556m.g Eutrema salsugineum Thhalv10000556m.g N 0.804
Thhalv10019474m.g Eutrema salsugineum Thhalv10019474m.g N 0.804
VIT_09s0002g08830 Vitis vinifera VIT_09s0002g08830 I 0.797