ENSLACG00000000328 (Latimeria chalumnae)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 ENSLACG00000000328 T034782_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Tfap4
M01717_2.00 		Mus musculus
VHCABVYGB
VCRBVTGDB		 PBM
Weirauch et al.(2014)
pTH5067 		0.724 1.000
TFAP4
M02776_2.00 		Homo sapiens
AWCAGCTGWY
RWCAGCTGWT		 SELEX
Jolma et al.(2013)
TFAP4_1 		0.914 1.000
TFAP4
M02777_2.00 		Homo sapiens
AWCAGCTGWT
AWCAGCTGWT		 SELEX
Jolma et al.(2013)
TFAP4_2 		0.724 1.000
TFAP4
M04066_2.00 		Homo sapiens
VHCAKVTGDB
VHCABMTGDB		 SELEX
Yin et al.(2017)
TFAP4_eDBD_HT-SELEX_1 		0.724 1.000
TFAP4
M04067_2.00 		Homo sapiens
VWCAGCTGWB
VWCAGCTGWB		 SELEX
Yin et al.(2017)
TFAP4_eDBD_HT-SELEX_2 		0.724 1.000
TFAP4
M04070_2.00 		Homo sapiens
RHCAYVTGDB
VHCABRTGDY		 SELEX
Yin et al.(2017)
TFAP4_FL_HT-SELEX_1 		0.914 1.000
TFAP4
M04071_2.00 		Homo sapiens
VHCAGCTGDB
VHCAGCTGDB		 SELEX
Yin et al.(2017)
TFAP4_FL_HT-SELEX_2 		0.914 1.000
TFAP4
M08712_2.00 		Homo sapiens
VMNCAGCTGR
YCAGCTGNKB		 Misc
Kulakovskiy et al.(2013)
TFAP4_HUMAN.H11MO.0.A 		0.914 1.000
TFAP4
M09453_2.00 		Homo sapiens
NVHCAGCTGD
HCAGCTGDBN		 Misc
Heinz et al.(2010)
AML-Tfap4_GSE45738 		0.724 1.000
TFAP4
M09802_2.00 		Homo sapiens
MNGNCHVCAGCTGDBBBW
WVVVHCAGCTGBDGNCNK		 Transfac
Matys et al.(2006)
V$AP4_01 		0.724 1.000
TFAP4
M09803_2.00 		Homo sapiens
NNSAGCTGHB
VDCAGCTSNN		 Transfac
Matys et al.(2006)
V$AP4_Q5 		0.724 1.000
TFAP4
M09804_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AP4_Q6_01 		0.724 1.000
TFAP4
M09805_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AP4_Q6_02 		0.724 1.000
TFAP4
M09806_2.00 		Homo sapiens
NVCAGCTGHB
VDCAGCTGBN		 Transfac
Matys et al.(2006)
V$AP4_Q6 		0.724 1.000
TFAP4
M04068_2.00 		Homo sapiens
DHCABMTGDN
NHCAKVTGDH		 SELEX
Yin et al.(2017)
TFAP4_eDBD_Methyl-HT-SELEX_1 		0.724 1.000
TFAP4
M04069_2.00 		Homo sapiens
AWCAGCTGWT
AWCAGCTGWT		 SELEX
Yin et al.(2017)
TFAP4_eDBD_Methyl-HT-SELEX_2 		0.724 1.000
TFAP4
M04072_2.00 		Homo sapiens
VHCABVTGDB
VHCABVTGDB		 SELEX
Yin et al.(2017)
TFAP4_FL_Methyl-HT-SELEX_1 		0.724 1.000
TFAP4
M04073_2.00 		Homo sapiens
VHCAGCTGDB
VHCAGCTGDB		 SELEX
Yin et al.(2017)
TFAP4_FL_Methyl-HT-SELEX_2 		0.724 1.000
crp
M03595_2.00 		Drosophila melanogaster
AACAGCTGWT
AWCAGCTGTT		 SELEX
Nitta et al.(2015)
crp_1 		0.843 0.808
crp
M05937_2.00 		Drosophila melanogaster
VAHCAGCTGAY
RTCAGCTGDWB		 B1H
Zhu et al.(2011)
crp_SANGER_10_FBgn0001994 		0.843 0.808
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSLACP00000000362 bHLH 49 100
ENSLACP00000000363 bHLH 1 40

Links

Other bHLH family TFs
Other Latimeria chalumnae TFs

105 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
30174.m008818 Ricinus communis 30174.m008818 I
ZAT1 Arabidopsis thaliana AT1G02030 D
ZAT4 Arabidopsis thaliana AT2G45120 D
ZAT9 Arabidopsis thaliana AT3G60580 D
BGIOSGA008755 Oryza indica BGIOSGA008755 I
BGIOSGA016894 Oryza indica BGIOSGA016894 I
Bo3g037560 Brassica oleracea Bo3g037560 I
Bo4g104940 Brassica oleracea Bo4g104940 I
Bo4g195370 Brassica oleracea Bo4g195370 I
Bo6g077190 Brassica oleracea Bo6g077190 I
Bo8g095300 Brassica oleracea Bo8g095300 I
Bostr.13158s0058 Boechera stricta Bostr.13158s0058 I
Bostr.25993s0262 Boechera stricta Bostr.25993s0262 I
Bostr.5325s0123 Boechera stricta Bostr.5325s0123 I
Bra000372 Brassica rapa Bra000372 I
Bra003422 Brassica rapa Bra003422 I
Bra007545 Brassica rapa Bra007545 I
Bra014483 Brassica rapa Bra014483 I
Bra040325 Brassica rapa Bra040325 I
BRADI3G33100 Brachypodium distachyon BRADI3G33100 I
Cagra.0239s0063 Capsella grandiflora Cagra.0239s0063 I
Cagra.6011s0004 Capsella grandiflora Cagra.6011s0004 I
Carubv10017660m.g Capsella rubella Carubv10017660m.g I
Carubv10023569m.g Capsella rubella Carubv10023569m.g I
cassava14164.m1 Manihot esculenta cassava14164.m1 I
cassava19892.m1 Manihot esculenta cassava19892.m1 I
Eucgr.D02497 Eucalyptus grandis Eucgr.D02497 I
evm.TU.supercontig_2070.1 Carica papaya evm.TU.supercontig_2070.1 I
fgenesh2_kg.4__2705__AT2G45120.1 Arabidopsis lyrata fgenesh2_kg.4__2705__AT2G45120.1 I
Gorai.001G175400 Gossypium raimondii Gorai.001G175400 I
Gorai.004G164000 Gossypium raimondii Gorai.004G164000 I
Gorai.008G106500 Gossypium raimondii Gorai.008G106500 I
GRMZM2G170520 Zea mays GRMZM2G170520 I
GSMUA_Achr11G21040_001 Musa acuminata GSMUA_Achr11G21040_001 I
GSMUA_Achr1G01550_001 Musa acuminata GSMUA_Achr1G01550_001 I
GSMUA_Achr4G26920_001 Musa acuminata GSMUA_Achr4G26920_001 I
GSMUA_Achr5G15450_001 Musa acuminata GSMUA_Achr5G15450_001 I
GSMUA_AchrUn_randomG03030_001 Musa acuminata GSMUA_AchrUn_randomG03030_001 I
Lus10009278.g Linum usitatissimum Lus10009278.g I
Lus10015888.g Linum usitatissimum Lus10015888.g I
OB04G28040 Oryza brachyantha OB04G28040 I
OBART02G26700 Oryza barthii OBART02G26700 I
OBART04G21020 Oryza barthii OBART04G21020 I
OGLUM02G27190 Oryza glumaepatula OGLUM02G27190 I
OLONG_016061 Oryza longistaminata OLONG_016061 I
OMERI02G26030 Oryza meridionalis OMERI02G26030 I
OMERI04G17450 Oryza meridionalis OMERI04G17450 I
ONIVA02G29150 Oryza nivara ONIVA02G29150 I
ONIVA04G19260 Oryza nivara ONIVA04G19260 I
OPUNC04G18700 Oryza punctata OPUNC04G18700 I
ORGLA02G0229600 Oryza glaberrima ORGLA02G0229600 I
ORGLA04G0180800 Oryza glaberrima ORGLA04G0180800 I
ORUFI02G28150 Oryza rufipogon ORUFI02G28150 I
ORUFI04G22610 Oryza rufipogon ORUFI04G22610 I
OS02G0659500 Oryza sativa OS02G0659500 I
OS04G0552700 Oryza sativa OS04G0552700 I
Pavir.Ab02618 Panicum virgatum Pavir.Ab02618 I
PGSC0003DMG400020929 Solanum tuberosum PGSC0003DMG400020929 I
PGSC0003DMG400024550 Solanum tuberosum PGSC0003DMG400024550 I
PGSC0003DMG400026020 Solanum tuberosum PGSC0003DMG400026020 I
POPTR_0002s14460 Populus trichocarpa POPTR_0002s14460 I
SapurV1A.0033s0440 Salix purpurea SapurV1A.0033s0440 I
SapurV1A.0248s0230 Salix purpurea SapurV1A.0248s0230 I
scaffold_503291.1 Arabidopsis lyrata scaffold_503291.1 I
Si010615m.g Setaria italica Si010615m.g I
Solyc01g090840.2 Solanum lycopersicum Solyc01g090840.2 I
Solyc03g115450.1 Solanum lycopersicum Solyc03g115450.1 I
Thhalv10001538m.g Eutrema salsugineum Thhalv10001538m.g I
Thhalv10006508m.g Eutrema salsugineum Thhalv10006508m.g I
TRIUR3_29692 Triticum urartu TRIUR3_29692 I
VIT_15s0021g02720 Vitis vinifera VIT_15s0021g02720 I