GSMUA_AchrUn_randomG03030_001 (Musa acuminata)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 GSMUA_AchrUn_randomG03030_001 T118752_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZAT9
M06817_2.00 		Arabidopsis thaliana
YTACTWHH
DDWAGTAR		 Dap-seq
OMalley et al.(2016)
At3g60580_col_a 		0.768 0.783
ZAT4
M01168_2.00 		Arabidopsis thaliana
NNHRSTN
NASYDNN		 PBM
Lambert et al.(2019)
pTH11142 		0.768 0.761
ZAT1
M01167_2.00 		Arabidopsis thaliana
NHRCTNN
NNAGYDN		 PBM
Lambert et al.(2019)
pTH10246 		0.767 0.739
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GSMUA_AchrUn_randomP03030_001 C2H2 ZF 146 168
GSMUA_AchrUn_randomP03030_001 C2H2 ZF 193 215

Links

Other C2H2 ZF family TFs
Other Musa acuminata TFs

80 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA016894 Oryza indica BGIOSGA016894 I 0.792
GSMUA_Achr11G21040_001 Musa acuminata GSMUA_Achr11G21040_001 I 0.792
GSMUA_Achr4G12160_001 Musa acuminata GSMUA_Achr4G12160_001 I 0.792
OBART04G21020 Oryza barthii OBART04G21020 I 0.792
OMERI04G17450 Oryza meridionalis OMERI04G17450 I 0.792
ONIVA04G19260 Oryza nivara ONIVA04G19260 I 0.792
OPUNC04G18700 Oryza punctata OPUNC04G18700 I 0.792
ORGLA04G0180800 Oryza glaberrima ORGLA04G0180800 I 0.792
ORUFI04G22610 Oryza rufipogon ORUFI04G22610 I 0.792
OS04G0552700 Oryza sativa OS04G0552700 I 0.792
BRADI3G33100 Brachypodium distachyon BRADI3G33100 I 0.786
GSMUA_Achr1G01550_001 Musa acuminata GSMUA_Achr1G01550_001 I 0.786
GSMUA_Achr4G26920_001 Musa acuminata GSMUA_Achr4G26920_001 I 0.786
OB04G28040 Oryza brachyantha OB04G28040 I 0.786
OLONG_016061 Oryza longistaminata OLONG_016061 I 0.786
BGIOSGA008755 Oryza indica BGIOSGA008755 I 0.782
OBART02G26700 Oryza barthii OBART02G26700 I 0.782
OGLUM02G27190 Oryza glumaepatula OGLUM02G27190 I 0.782
OMERI02G26030 Oryza meridionalis OMERI02G26030 I 0.782
ONIVA02G29150 Oryza nivara ONIVA02G29150 I 0.782
ORGLA02G0229600 Oryza glaberrima ORGLA02G0229600 I 0.782
ORUFI02G28150 Oryza rufipogon ORUFI02G28150 I 0.782
OS02G0659500 Oryza sativa OS02G0659500 I 0.782
GSMUA_Achr5G15450_001 Musa acuminata GSMUA_Achr5G15450_001 I 0.776
TRIUR3_29692 Triticum urartu TRIUR3_29692 I 0.776
POPTR_0002s14460 Populus trichocarpa POPTR_0002s14460 I 0.774
30174.m008818 Ricinus communis 30174.m008818 I 0.774
cassava19892.m1 Manihot esculenta cassava19892.m1 I 0.774
Lus10009278.g Linum usitatissimum Lus10009278.g I 0.774
SapurV1A.0033s0440 Salix purpurea SapurV1A.0033s0440 I 0.773
ZAT4 Arabidopsis thaliana AT2G45120 D 0.768
ZAT9 Arabidopsis thaliana AT3G60580 D 0.768
Bo3g037560 Brassica oleracea Bo3g037560 I 0.768
Bo4g104940 Brassica oleracea Bo4g104940 I 0.768
Bo4g195370 Brassica oleracea Bo4g195370 I 0.768
Bo6g077190 Brassica oleracea Bo6g077190 I 0.768
Bo8g095300 Brassica oleracea Bo8g095300 I 0.768
Bra000372 Brassica rapa Bra000372 I 0.768
Bra003422 Brassica rapa Bra003422 I 0.768
Bra007545 Brassica rapa Bra007545 I 0.768
Bra014483 Brassica rapa Bra014483 I 0.768
Bra040325 Brassica rapa Bra040325 I 0.768
fgenesh2_kg.4__2705__AT2G45120.1 Arabidopsis lyrata fgenesh2_kg.4__2705__AT2G45120.1 I 0.768
GRMZM2G170520 Zea mays GRMZM2G170520 I 0.768
PGSC0003DMG400026020 Solanum tuberosum PGSC0003DMG400026020 I 0.768
scaffold_503291.1 Arabidopsis lyrata scaffold_503291.1 I 0.768
Si010615m.g Setaria italica Si010615m.g I 0.768
Solyc01g090840.2 Solanum lycopersicum Solyc01g090840.2 I 0.768
VIT_15s0021g02720 Vitis vinifera VIT_15s0021g02720 I 0.768
Bostr.13158s0058 Boechera stricta Bostr.13158s0058 I 0.768
Bostr.25993s0262 Boechera stricta Bostr.25993s0262 I 0.768
Cagra.0239s0063 Capsella grandiflora Cagra.0239s0063 I 0.768
Cagra.6011s0004 Capsella grandiflora Cagra.6011s0004 I 0.768
Carubv10017660m.g Capsella rubella Carubv10017660m.g I 0.768
Carubv10023569m.g Capsella rubella Carubv10023569m.g I 0.768
evm.TU.supercontig_2070.1 Carica papaya evm.TU.supercontig_2070.1 I 0.768
Gorai.001G175400 Gossypium raimondii Gorai.001G175400 I 0.768
SapurV1A.0248s0230 Salix purpurea SapurV1A.0248s0230 I 0.768
Thhalv10001538m.g Eutrema salsugineum Thhalv10001538m.g I 0.768
Thhalv10006508m.g Eutrema salsugineum Thhalv10006508m.g I 0.768
ZAT1 Arabidopsis thaliana AT1G02030 D 0.767
PGSC0003DMG400024550 Solanum tuberosum PGSC0003DMG400024550 I 0.767
Solyc03g115450.1 Solanum lycopersicum Solyc03g115450.1 I 0.767
Bostr.5325s0123 Boechera stricta Bostr.5325s0123 I 0.767
Eucgr.D02497 Eucalyptus grandis Eucgr.D02497 I 0.767
Gorai.004G164000 Gossypium raimondii Gorai.004G164000 I 0.767
Gorai.008G106500 Gossypium raimondii Gorai.008G106500 I 0.767
cassava14164.m1 Manihot esculenta cassava14164.m1 I 0.765
PGSC0003DMG400020929 Solanum tuberosum PGSC0003DMG400020929 I 0.762
Pavir.Ab02618 Panicum virgatum Pavir.Ab02618 I 0.762
GLYMA01G18606 Glycine max GLYMA01G18606 I 0.758
GLYMA01G32981 Glycine max GLYMA01G32981 I 0.758
GLYMA03G03950 Glycine max GLYMA03G03950 I 0.758
MTR_0160s0030 Medicago truncatula MTR_0160s0030 I 0.758
MTR_4g027440 Medicago truncatula MTR_4g027440 I 0.758
Ca_23672 Cicer arietinum Ca_23672 I 0.758
mgf021094m Mimulus guttatus mgf021094m I 0.758
Ciclev10020499m.g Citrus clementina Ciclev10020499m.g I 0.758
Lus10015888.g Linum usitatissimum Lus10015888.g I 0.758
orange1.1g044606m.g Citrus sinensis orange1.1g044606m.g I 0.758