OB05G15870 (Oryza brachyantha)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 OB05G15870 T042015_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK15505.1
M01125_2.00 		Cannabis sativa
NRCACGTGYN
NRCACGTGYN		 PBM
Lambert et al.(2019)
pTH10268 		0.861 0.673
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OB05G15870.1 bHLH 196 244

Links

Other bHLH family TFs
Other Oryza brachyantha TFs

43 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
27446.m000475 Ricinus communis 27446.m000475 I
AMTR_s00026p00180130 Amborella trichopoda AMTR_s00026p00180130 I
BGIOSGA019608 Oryza indica BGIOSGA019608 N
Bo2g095830 Brassica oleracea Bo2g095830 N
Bostr.20129s0456 Boechera stricta Bostr.20129s0456 N
Bra008460 Brassica rapa Bra008460 N
BRADI3G18070 Brachypodium distachyon BRADI3G18070 I
Cagra.1725s0082 Capsella grandiflora Cagra.1725s0082 N
Carubv10022119m.g Capsella rubella Carubv10022119m.g N
cassava38416.m1 Manihot esculenta cassava38416.m1 I
Ca_20041 Cicer arietinum Ca_20041 I
Ciclev10027171m.g Citrus clementina Ciclev10027171m.g I
Cla015583 Citrullus lanatus Cla015583 I
Cucsa.105790 Cucumis sativus Cucsa.105790 I
Eucgr.F03941 Eucalyptus grandis Eucgr.F03941 N
evm.TU.supercontig_10.125 Carica papaya evm.TU.supercontig_10.125 I
e_gw1.14.213.1 Physcomitrella patens e_gw1.14.213.1 N
e_gw1.145.79.1 Physcomitrella patens e_gw1.145.79.1 N
e_gw1.15.234.1 Physcomitrella patens e_gw1.15.234.1 N
e_gw1.276.69.1 Physcomitrella patens e_gw1.276.69.1 N
fgenesh1_pg.scaffold_23000002 Physcomitrella patens fgenesh1_pg.scaffold_23000002 I
fgenesh1_pm.C_scaffold_2001935 Arabidopsis lyrata fgenesh1_pm.C_scaffold_2001935 N
gene15953-v1.0-hybrid Fragaria vesca gene15953-v1.0-hybrid I
GLYMA07G03041 Glycine max GLYMA07G03041 I
GLYMA08G23074 Glycine max GLYMA08G23074 I
Gorai.006G107500 Gossypium raimondii Gorai.006G107500 I
Gorai.009G125700 Gossypium raimondii Gorai.009G125700 N
GSMUA_Achr1G25890_001 Musa acuminata GSMUA_Achr1G25890_001 I
gw1.204.54.1 Physcomitrella patens gw1.204.54.1 N
gw1.340.39.1 Physcomitrella patens gw1.340.39.1 N
Lus10014345.g Linum usitatissimum Lus10014345.g N
Lus10026053.g Linum usitatissimum Lus10026053.g N
MDP0000264187 Malus domestica MDP0000264187 I
mgf023662m Mimulus guttatus mgf023662m I
MTR_4g009260 Medicago truncatula MTR_4g009260 I
OMERI05G10040 Oryza meridionalis OMERI05G10040 N
ONIVA05G11840 Oryza nivara ONIVA05G11840 N
orange1.1g047950m.g Citrus sinensis orange1.1g047950m.g I
ORUFI05G12300 Oryza rufipogon ORUFI05G12300 N
OS05G0316800 Oryza sativa OS05G0316800 N
Pavir.Fa01730 Panicum virgatum Pavir.Fa01730 I
Pavir.Fb00952 Panicum virgatum Pavir.Fb00952 I
Pavir.Fb01486 Panicum virgatum Pavir.Fb01486 I
PGSC0003DMG400000091 Solanum tuberosum PGSC0003DMG400000091 I
PGSC0003DMG400010135 Solanum tuberosum PGSC0003DMG400010135 N
Pm013734 Prunus mume Pm013734 I
POPTR_0001s32050 Populus trichocarpa POPTR_0001s32050 I
POPTR_0013s15440 Populus trichocarpa POPTR_0013s15440 I
POPTR_0017s08090 Populus trichocarpa POPTR_0017s08090 I
PRUPE_ppa020928mg Prunus persica PRUPE_ppa020928mg I
SapurV1A.0058s0710 Salix purpurea SapurV1A.0058s0710 I
SapurV1A.1000s0130 Salix purpurea SapurV1A.1000s0130 I
SELMODRAFT_412693 Selaginella moellendorffii SELMODRAFT_412693 N
SELMODRAFT_417258 Selaginella moellendorffii SELMODRAFT_417258 N
SELMODRAFT_428344 Selaginella moellendorffii SELMODRAFT_428344 N
SELMODRAFT_428599 Selaginella moellendorffii SELMODRAFT_428599 N
Solyc01g095500.2 Solanum lycopersicum Solyc01g095500.2 I
Solyc03g117230.1 Solanum lycopersicum Solyc03g117230.1 N
TCM_027348 Theobroma cacao TCM_027348 I
Thhalv10000556m.g Eutrema salsugineum Thhalv10000556m.g N
Thhalv10019474m.g Eutrema salsugineum Thhalv10019474m.g N
VIT_09s0002g08830 Vitis vinifera VIT_09s0002g08830 I