CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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TRAES3BF135900010CFD_g
(
Triticum aestivum
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
TRAES3BF135900010CFD_g
T045642_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
AT2G42280
M06733_2.00
Arabidopsis thaliana
DNCMACTTGYH
DRCAAGTKGNH
Dap-seq
OMalley et al.(2016)
bHLH130_col_a
0.861
0.863
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
TRAES3BF135900010CFD_t1
bHLH
289
339
ATHPRSIAERERRTRISKRLRRLQDLVPNMDKQTNTSDMLDIAVDYIKVLQ
Links
Other
bHLH
family TFs
Other
Triticum aestivum
TFs
74 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MYB76
Arabidopsis lyrata
Al_scaffold_0006_698
I
AMTR_s00009p00257950
Amborella trichopoda
AMTR_s00009p00257950
N
AMTR_s00057p00069720
Amborella trichopoda
AMTR_s00057p00069720
N
AMTR_s00087p00039380
Amborella trichopoda
AMTR_s00087p00039380
N
Aquca_073_00013
Aquilegia coerulea
Aquca_073_00013
I
MYB60
Arabidopsis thaliana
AT1G08810
D
MYB3
Arabidopsis thaliana
AT1G22640
D
MYB8
Arabidopsis thaliana
AT1G35515
I
MYB29
Arabidopsis thaliana
AT5G07690
I
MYB76
Arabidopsis thaliana
AT5G07700
I
ATMYB16
Arabidopsis thaliana
AT5G15310
I
MYB111
Arabidopsis thaliana
AT5G49330
D
MYB28
Arabidopsis thaliana
AT5G61420
I
BGIOSGA010548
Oryza indica
BGIOSGA010548
N
BGIOSGA010900
Oryza indica
BGIOSGA010900
I
Bo2g161590
Brassica oleracea
Bo2g161590
I
Bo3g004500
Brassica oleracea
Bo3g004500
I
Bo4g198650
Brassica oleracea
Bo4g198650
N
Bo7g098590
Brassica oleracea
Bo7g098590
I
Bo8g104180
Brassica oleracea
Bo8g104180
N
Bo9g014610
Brassica oleracea
Bo9g014610
I
Bo9g175680
Brassica oleracea
Bo9g175680
I
Bostr.13129s0197
Boechera stricta
Bostr.13129s0197
I
Bostr.15774s0064
Boechera stricta
Bostr.15774s0064
I
Bostr.26833s0098
Boechera stricta
Bostr.26833s0098
I
Bra005949
Brassica rapa
Bra005949
I
Bra012961
Brassica rapa
Bra012961
I
Bra024685
Brassica rapa
Bra024685
N
Bra029311
Brassica rapa
Bra029311
I
Bra035929
Brassica rapa
Bra035929
I
Cagra.0542s0036
Capsella grandiflora
Cagra.0542s0036
I
Cagra.0876s0043
Capsella grandiflora
Cagra.0876s0043
N
Cagra.2925s0017
Capsella grandiflora
Cagra.2925s0017
I
Cagra.5789s0001
Capsella grandiflora
Cagra.5789s0001
N
Cagra.9781s0007
Capsella grandiflora
Cagra.9781s0007
I
Carubv10001328m.g
Capsella rubella
Carubv10001328m.g
I
Carubv10012451m.g
Capsella rubella
Carubv10012451m.g
I
Carubv10027861m.g
Capsella rubella
Carubv10027861m.g
I
cassava15703.m1
Manihot esculenta
cassava15703.m1
N
cassava17115.m1
Manihot esculenta
cassava17115.m1
I
cassava24756.valid.m1
Manihot esculenta
cassava24756.valid.m1
I
cassava2662.m1
Manihot esculenta
cassava2662.m1
N
cassava29110.valid.m1
Manihot esculenta
cassava29110.valid.m1
I
cassava44039.valid.m1
Manihot esculenta
cassava44039.valid.m1
I
cassava45648.m1
Manihot esculenta
cassava45648.m1
N
cassava46146.m1
Manihot esculenta
cassava46146.m1
I
cassava47112.m1
Manihot esculenta
cassava47112.m1
I
Ca_10215
Cicer arietinum
Ca_10215
N
chr1.CM0600.120.nd
Lotus japonicus
chr1.CM0600.120.nd
N
chr5.CM0071.390.nd
Lotus japonicus
chr5.CM0071.390.nd
N
Ciclev10020307m.g
Citrus clementina
Ciclev10020307m.g
I
Ciclev10023519m.g
Citrus clementina
Ciclev10023519m.g
N
Cla013211
Citrullus lanatus
Cla013211
I
CM0385.220.nd
Lotus japonicus
CM0385.220.nd
N
Cucsa.318610
Cucumis sativus
Cucsa.318610
I
Eucgr.B03766
Eucalyptus grandis
Eucgr.B03766
N
Eucgr.G02195
Eucalyptus grandis
Eucgr.G02195
I
evm.TU.supercontig_1.55
Carica papaya
evm.TU.supercontig_1.55
N
evm.TU.supercontig_34.3
Carica papaya
evm.TU.supercontig_34.3
N
e_gw1.1.4.1
Physcomitrella patens
e_gw1.1.4.1
N
F775_42755
Aegilops tauschii
F775_42755
N
HOS10
Arabidopsis lyrata
fgenesh2_kg.1__3635__AT1G35515.1
I
MYB29
Arabidopsis lyrata
fgenesh2_kg.6__738__AT5G07690.1
I
gene02324-v1.0-hybrid
Fragaria vesca
gene02324-v1.0-hybrid
I
gene09406-v1.0-hybrid
Fragaria vesca
gene09406-v1.0-hybrid
I
GLYMA0041S00310
Glycine max
GLYMA0041S00310
I
GLYMA03G37640
Glycine max
GLYMA03G37640
I
GLYMA09G04370
Glycine max
GLYMA09G04370
I
GLYMA10G01801
Glycine max
GLYMA10G01801
I
GLYMA14G10483
Glycine max
GLYMA14G10483
I
Gorai.001G024300
Gossypium raimondii
Gorai.001G024300
I
Gorai.001G239000
Gossypium raimondii
Gorai.001G239000
I
Gorai.008G086400
Gossypium raimondii
Gorai.008G086400
I
Gorai.012G186500
Gossypium raimondii
Gorai.012G186500
I
GRMZM2G001223
Zea mays
GRMZM2G001223
I
GRMZM2G051528
Zea mays
GRMZM2G051528
I
GSMUA_Achr5G18080_001
Musa acuminata
GSMUA_Achr5G18080_001
I
GSMUA_Achr5G23240_001
Musa acuminata
GSMUA_Achr5G23240_001
I
GSMUA_Achr6G02550_001
Musa acuminata
GSMUA_Achr6G02550_001
I
GSMUA_Achr7G18410_001
Musa acuminata
GSMUA_Achr7G18410_001
I
LjSGA_014958.1
Lotus japonicus
LjSGA_014958.1
N
LjSGA_034303.1
Lotus japonicus
LjSGA_034303.1
N
LjSGA_057038.1
Lotus japonicus
LjSGA_057038.1
N
LjSGA_057664.1
Lotus japonicus
LjSGA_057664.1
N
Lus10019085.g
Linum usitatissimum
Lus10019085.g
I
Lus10036336.g
Linum usitatissimum
Lus10036336.g
I
MDP0000119725
Malus domestica
MDP0000119725
I
MDP0000209761
Malus domestica
MDP0000209761
I
MDP0000607330
Malus domestica
MDP0000607330
I
MDP0000879675
Malus domestica
MDP0000879675
N
MDP0000911051
Malus domestica
MDP0000911051
N
mg021480m
Mimulus guttatus
mg021480m
N
mgf017705m
Mimulus guttatus
mgf017705m
N
mgf018056m
Mimulus guttatus
mgf018056m
N
mgf020736m
Mimulus guttatus
mgf020736m
N
mgf023771m
Mimulus guttatus
mgf023771m
N
MLOC_12474
Hordeum vulgare
MLOC_12474
N
MLOC_39554
Hordeum vulgare
MLOC_39554
I
MLOC_71332
Hordeum vulgare
MLOC_71332
N
MTR_1g087540
Medicago truncatula
MTR_1g087540
N
OB06G28240
Oryza brachyantha
OB06G28240
N
OBART03G14380
Oryza barthii
OBART03G14380
I
OMERI03G13130
Oryza meridionalis
OMERI03G13130
I
ONIVA03G15280
Oryza nivara
ONIVA03G15280
I
OPUNC03G13890
Oryza punctata
OPUNC03G13890
I
orange1.1g014829m.g
Citrus sinensis
orange1.1g014829m.g
I
orange1.1g019307m.g
Citrus sinensis
orange1.1g019307m.g
I
ORGLA02G0219000
Oryza glaberrima
ORGLA02G0219000
N
ORUFI03G15030
Oryza rufipogon
ORUFI03G15030
I
OS04G0517100
Oryza sativa
OS04G0517100
N
OS05G0350900
Oryza sativa
OS05G0350900
N
Pavir.Db00878
Panicum virgatum
Pavir.Db00878
N
Pavir.Eb02286
Panicum virgatum
Pavir.Eb02286
N
Pavir.Eb03517
Panicum virgatum
Pavir.Eb03517
I
Pavir.J00442
Panicum virgatum
Pavir.J00442
I
Pavir.J14839
Panicum virgatum
Pavir.J14839
N
Pavir.J25377
Panicum virgatum
Pavir.J25377
N
PDK_20s1922781g001
Phoenix dactylifera
PDK_20s1922781g001
N
PGSC0003DMG400014550
Solanum tuberosum
PGSC0003DMG400014550
I
PGSC0003DMG401010883
Solanum tuberosum
PGSC0003DMG401010883
N
PK00358.1
Cannabis sativa
PK00358.1
N
PK21717.1
Cannabis sativa
PK21717.1
N
PK27708.1
Cannabis sativa
PK27708.1
I
Pm000007
Prunus mume
Pm000007
N
Pm015551
Prunus mume
Pm015551
N
Pm025102
Prunus mume
Pm025102
I
POPTR_0002s19920
Populus trichocarpa
POPTR_0002s19920
I
POPTR_0013s05310
Populus trichocarpa
POPTR_0013s05310
I
POPTR_0014s11780
Populus trichocarpa
POPTR_0014s11780
I
POPTR_0017s10780
Populus trichocarpa
POPTR_0017s10780
N
PRUPE_ppa004560mg
Prunus persica
PRUPE_ppa004560mg
I
PRUPE_ppa011954mg
Prunus persica
PRUPE_ppa011954mg
I
SapurV1A.0158s0390
Salix purpurea
SapurV1A.0158s0390
I
SapurV1A.0180s0510
Salix purpurea
SapurV1A.0180s0510
I
SapurV1A.0876s0040
Salix purpurea
SapurV1A.0876s0040
I
SapurV1A.0890s0050
Salix purpurea
SapurV1A.0890s0050
I
SapurV1A.3377s0010
Salix purpurea
SapurV1A.3377s0010
I
MYB111
Arabidopsis lyrata
scaffold_801313.1
I
MYB28
Arabidopsis lyrata
scaffold_802785.1
I
Solyc03g098270.1
Solanum lycopersicum
Solyc03g098270.1
N
TCM_011660
Theobroma cacao
TCM_011660
I
TCM_041010
Theobroma cacao
TCM_041010
I
Thhalv10004407m.g
Eutrema salsugineum
Thhalv10004407m.g
I
Thhalv10004518m.g
Eutrema salsugineum
Thhalv10004518m.g
I
Thhalv10013952m.g
Eutrema salsugineum
Thhalv10013952m.g
I
Thhalv10021048m.g
Eutrema salsugineum
Thhalv10021048m.g
I
Traes_3AL_F09C7CA19
Triticum aestivum
Traes_3AL_F09C7CA19
N
Traes_3DL_D9A29948B
Triticum aestivum
Traes_3DL_D9A29948B
N
Traes_7AS_ADDEF000C
Triticum aestivum
Traes_7AS_ADDEF000C
N
Traes_7AS_FD974A17F
Triticum aestivum
Traes_7AS_FD974A17F
N
Traes_7DS_76515C538
Triticum aestivum
Traes_7DS_76515C538
N
VIT_07s0005g01210
Vitis vinifera
VIT_07s0005g01210
I
VIT_17s0000g02650
Vitis vinifera
VIT_17s0000g02650
I