cassava44039.valid.m1 (Manihot esculenta)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 cassava44039.valid.m1 T284290_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB51
M07010_2.00 		Arabidopsis thaliana
NHNHHNHNNNYYYACCWACYW
WRGTWGGTRRRNNNDNDDNDN		 Dap-seq
OMalley et al.(2016)
MYB51_col_a 		0.733 0.785
MYB106
M11040_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AT3G01140_01 		0.667 0.806
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
cassava44039.valid.m1 Myb 14 61
cassava44039.valid.m1 Myb 67 112

Links

Other Myb/SANT family TFs
Other Manihot esculenta TFs

146 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
cassava46146.m1 Manihot esculenta cassava46146.m1 I 0.884
cassava47112.m1 Manihot esculenta cassava47112.m1 I 0.871
MYB29 Arabidopsis thaliana AT5G07690 I 0.853
Bostr.13129s0197 Boechera stricta Bostr.13129s0197 I 0.853
Thhalv10013952m.g Eutrema salsugineum Thhalv10013952m.g I 0.853
MYB29 Arabidopsis lyrata fgenesh2_kg.6__738__AT5G07690.1 I 0.837
Cagra.2925s0017 Capsella grandiflora Cagra.2925s0017 I 0.836
Carubv10001328m.g Capsella rubella Carubv10001328m.g I 0.836
Lus10019085.g Linum usitatissimum Lus10019085.g I 0.836
cassava46145.m1 Manihot esculenta cassava46145.m1 I 0.832
Bo9g175680 Brassica oleracea Bo9g175680 I 0.825
Bra005949 Brassica rapa Bra005949 I 0.821
Bo9g014610 Brassica oleracea Bo9g014610 I 0.819
Bra035929 Brassica rapa Bra035929 I 0.819
Thhalv10004407m.g Eutrema salsugineum Thhalv10004407m.g I 0.819
Bo3g004500 Brassica oleracea Bo3g004500 I 0.812
Bo7g098590 Brassica oleracea Bo7g098590 I 0.808
Bra012961 Brassica rapa Bra012961 I 0.808
evm.TU.supercontig_3.239 Carica papaya evm.TU.supercontig_3.239 I 0.792
MYB28 Arabidopsis thaliana AT5G61420 I 0.788
Bo2g161590 Brassica oleracea Bo2g161590 I 0.788
MYB28 Arabidopsis lyrata scaffold_802785.1 I 0.788
Bostr.26833s0098 Boechera stricta Bostr.26833s0098 I 0.788
Cagra.0542s0036 Capsella grandiflora Cagra.0542s0036 I 0.788
Carubv10027861m.g Capsella rubella Carubv10027861m.g I 0.788
MYB76 Arabidopsis lyrata Al_scaffold_0006_698 I 0.780
MYB76 Arabidopsis thaliana AT5G07700 I 0.780
Bra029311 Brassica rapa Bra029311 I 0.764
TCM_014091 Theobroma cacao TCM_014091 I 0.743
Bo9g014380 Brassica oleracea Bo9g014380 I 0.740
Gorai.003G097900 Gossypium raimondii Gorai.003G097900 I 0.739
Bo5g025570 Brassica oleracea Bo5g025570 I 0.736
Bra025666 Brassica rapa Bra025666 I 0.736
Thhalv10008152m.g Eutrema salsugineum Thhalv10008152m.g I 0.736
Bo6g118350 Brassica oleracea Bo6g118350 I 0.734
Bra015939 Brassica rapa Bra015939 I 0.734
ATMYB122 Arabidopsis lyrata fgenesh2_kg.2__1680__AT1G74080.1 I 0.734
MYB51 Arabidopsis thaliana AT1G18570 D 0.733
MYB51 Arabidopsis lyrata fgenesh2_kg.1__2031__AT1G18570.1 I 0.733
Bostr.7128s0464 Boechera stricta Bostr.7128s0464 I 0.733
Cagra.4153s0023 Capsella grandiflora Cagra.4153s0023 I 0.733
Carubv10009563m.g Capsella rubella Carubv10009563m.g I 0.733
PK01174.1 Cannabis sativa PK01174.1 I 0.730
PK27708.1 Cannabis sativa PK27708.1 I 0.730
MYB122 Arabidopsis thaliana AT1G74080 I 0.729
PK14811.1 Cannabis sativa PK14811.1 I 0.728
Bo8g104300 Brassica oleracea Bo8g104300 I 0.726
Bra031035 Brassica rapa Bra031035 I 0.726
Bo2g080900 Brassica oleracea Bo2g080900 I 0.725
Bo8g067910 Brassica oleracea Bo8g067910 I 0.724
Bra016553 Brassica rapa Bra016553 I 0.724
Bra008131 Brassica rapa Bra008131 I 0.715
Bra035954 Brassica rapa Bra035954 I 0.714
Thhalv10018705m.g Eutrema salsugineum Thhalv10018705m.g I 0.714
MYB34 Arabidopsis thaliana AT5G60890 I 0.712
Bra013000 Brassica rapa Bra013000 I 0.712
ATMYB34 Arabidopsis lyrata fgenesh2_kg.8__2056__AT5G60890.1 I 0.712
Bostr.26833s0149 Boechera stricta Bostr.26833s0149 I 0.712
Carubv10027524m.g Capsella rubella Carubv10027524m.g I 0.712
Thhalv10004638m.g Eutrema salsugineum Thhalv10004638m.g I 0.712
Bostr.13129s0196 Boechera stricta Bostr.13129s0196 I 0.711
Bo7g098110 Brassica oleracea Bo7g098110 I 0.709
Bo2g161180 Brassica oleracea Bo2g161180 I 0.692
Bra029349 Brassica rapa Bra029349 I 0.692
gene12738-v1.0-hybrid Fragaria vesca gene12738-v1.0-hybrid I 0.692
POPTR_0002s19920 Populus trichocarpa POPTR_0002s19920 I 0.682
e_gw1.106.133.1 Physcomitrella patens e_gw1.106.133.1 I 0.680
Lus10028435.g Linum usitatissimum Lus10028435.g I 0.680
Lus10041888.g Linum usitatissimum Lus10041888.g I 0.680
evm.TU.supercontig_28.71 Carica papaya evm.TU.supercontig_28.71 I 0.679
Carubv10020723m.g Capsella rubella Carubv10020723m.g I 0.678
Bra029350 Brassica rapa Bra029350 I 0.677
POPTR_0014s11780 Populus trichocarpa POPTR_0014s11780 I 0.677
cassava24756.valid.m1 Manihot esculenta cassava24756.valid.m1 I 0.674
SapurV1A.0180s0510 Salix purpurea SapurV1A.0180s0510 I 0.674
MTR_4g082290 Medicago truncatula MTR_4g082290 I 0.672
Cla017646 Citrullus lanatus Cla017646 I 0.670
MYB106 Arabidopsis thaliana AT3G01140 D 0.667
BGIOSGA026935 Oryza indica BGIOSGA026935 I 0.667
Bo5g156410 Brassica oleracea Bo5g156410 I 0.667
Bra039142 Brassica rapa Bra039142 I 0.667
MYB106 Arabidopsis lyrata fgenesh2_kg.3__117__AT3G01140.1 I 0.667
GLYMA09G37040 Glycine max GLYMA09G37040 I 0.667
GLYMA13G05550 Glycine max GLYMA13G05550 I 0.667
GLYMA18G49630 Glycine max GLYMA18G49630 I 0.667
LPERR08G12960 Leersia perrieri LPERR08G12960 I 0.667
OB08G23170 Oryza brachyantha OB08G23170 I 0.667
OBART08G15700 Oryza barthii OBART08G15700 I 0.667
OGLUM08G16450 Oryza glumaepatula OGLUM08G16450 I 0.667
OLONG_004507 Oryza longistaminata OLONG_004507 I 0.667
OMERI08G12990 Oryza meridionalis OMERI08G12990 I 0.667
ONIVA08G16810 Oryza nivara ONIVA08G16810 I 0.667
OPUNC08G13770 Oryza punctata OPUNC08G13770 I 0.667
ORGLA08G0137800 Oryza glaberrima ORGLA08G0137800 I 0.667
ORUFI08G17610 Oryza rufipogon ORUFI08G17610 I 0.667
PGSC0003DMG400001339 Solanum tuberosum PGSC0003DMG400001339 I 0.667
POPTR_0008s08870 Populus trichocarpa POPTR_0008s08870 I 0.667
POPTR_0017s12230 Populus trichocarpa POPTR_0017s12230 I 0.667
PRUPE_ppa006769mg Prunus persica PRUPE_ppa006769mg I 0.667
Si013994m.g Setaria italica Si013994m.g I 0.667
TCM_011659 Theobroma cacao TCM_011659 I 0.667
TCM_018639 Theobroma cacao TCM_018639 I 0.667
VIT_01s0026g02770 Vitis vinifera VIT_01s0026g02770 I 0.667
VIT_14s0108g01080 Vitis vinifera VIT_14s0108g01080 I 0.667
Ca_10504 Cicer arietinum Ca_10504 I 0.667
Cla010483 Citrullus lanatus Cla010483 I 0.667
Pm015916 Prunus mume Pm015916 I 0.667
cassava1759.valid.m1 Manihot esculenta cassava1759.valid.m1 I 0.667
cassava360.valid.m1 Manihot esculenta cassava360.valid.m1 I 0.667
Cucsa.158170 Cucumis sativus Cucsa.158170 I 0.667
Cagra.1390s0010 Capsella grandiflora Cagra.1390s0010 I 0.667
Carubv10013887m.g Capsella rubella Carubv10013887m.g I 0.667
Ciclev10011948m.g Citrus clementina Ciclev10011948m.g I 0.667
Eucgr.J01362 Eucalyptus grandis Eucgr.J01362 I 0.667
evm.TU.supercontig_14.102 Carica papaya evm.TU.supercontig_14.102 I 0.667
gene04423-v1.0-hybrid Fragaria vesca gene04423-v1.0-hybrid I 0.667
Gorai.011G122800 Gossypium raimondii Gorai.011G122800 I 0.667
Gorai.012G052500 Gossypium raimondii Gorai.012G052500 I 0.667
Lus10033003.g Linum usitatissimum Lus10033003.g I 0.667
MDP0000121476 Malus domestica MDP0000121476 I 0.667
MDP0000274301 Malus domestica MDP0000274301 I 0.667
MDP0000278681 Malus domestica MDP0000278681 I 0.667
MDP0000742771 Malus domestica MDP0000742771 I 0.667
orange1.1g016708m.g Citrus sinensis orange1.1g016708m.g I 0.667
Pavir.Fa00877 Panicum virgatum Pavir.Fa00877 I 0.667
Pavir.J33881 Panicum virgatum Pavir.J33881 I 0.667
SapurV1A.0438s0010 Salix purpurea SapurV1A.0438s0010 I 0.667
PK22137.1 Cannabis sativa PK22137.1 I 0.667
LjSGA_020545.1 Lotus japonicus LjSGA_020545.1 I 0.667
mgf016794m Mimulus guttatus mgf016794m I 0.666
ATMYB16 Arabidopsis thaliana AT5G15310 I 0.661
Bo2g012520 Brassica oleracea Bo2g012520 I 0.661
Bo3g010230 Brassica oleracea Bo3g010230 I 0.661
Bo9g164230 Brassica oleracea Bo9g164230 I 0.661
Bra006296 Brassica rapa Bra006296 I 0.661
Bra008705 Brassica rapa Bra008705 I 0.661
Bra023515 Brassica rapa Bra023515 I 0.661
ATMYB16 Arabidopsis lyrata fgenesh2_kg.6__1513__AT5G15310.1 I 0.661
GRMZM2G079123 Zea mays GRMZM2G079123 I 0.661
POPTR_0008s08920 Populus trichocarpa POPTR_0008s08920 I 0.661
Ca_22367 Cicer arietinum Ca_22367 I 0.661
Bostr.2902s0269 Boechera stricta Bostr.2902s0269 I 0.661
Cagra.1036s0022 Capsella grandiflora Cagra.1036s0022 I 0.661
Carubv10001433m.g Capsella rubella Carubv10001433m.g I 0.661
Gorai.001G015200 Gossypium raimondii Gorai.001G015200 I 0.661
Thhalv10014101m.g Eutrema salsugineum Thhalv10014101m.g I 0.661