evm.TU.supercontig_3.239 (Carica papaya)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 evm.TU.supercontig_3.239 T287123_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB51
M07010_2.00 		Arabidopsis thaliana
NHNHHNHNNNYYYACCWACYW
WRGTWGGTRRRNNNDNDDNDN		 Dap-seq
OMalley et al.(2016)
MYB51_col_a 		0.717 0.785
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
evm.model.supercontig_3.239 Myb 14 61
evm.model.supercontig_3.239 Myb 67 112

Links

Other Myb/SANT family TFs
Other Carica papaya TFs

80 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
cassava44039.valid.m1 Manihot esculenta cassava44039.valid.m1 I 0.792
cassava47112.m1 Manihot esculenta cassava47112.m1 I 0.784
cassava46146.m1 Manihot esculenta cassava46146.m1 I 0.784
Thhalv10013952m.g Eutrema salsugineum Thhalv10013952m.g I 0.777
MYB29 Arabidopsis thaliana AT5G07690 I 0.777
Bostr.13129s0197 Boechera stricta Bostr.13129s0197 I 0.777
Bo6g118350 Brassica oleracea Bo6g118350 I 0.770
Bra015939 Brassica rapa Bra015939 I 0.770
MYB29 Arabidopsis lyrata fgenesh2_kg.6__738__AT5G07690.1 I 0.762
Bo2g080900 Brassica oleracea Bo2g080900 I 0.761
Lus10019085.g Linum usitatissimum Lus10019085.g I 0.760
Carubv10001328m.g Capsella rubella Carubv10001328m.g I 0.760
Cagra.2925s0017 Capsella grandiflora Cagra.2925s0017 I 0.760
Thhalv10018705m.g Eutrema salsugineum Thhalv10018705m.g I 0.750
Bra008131 Brassica rapa Bra008131 I 0.750
MYB122 Arabidopsis thaliana AT1G74080 I 0.750
Bo9g175680 Brassica oleracea Bo9g175680 I 0.750
Thhalv10004407m.g Eutrema salsugineum Thhalv10004407m.g I 0.749
Bra035929 Brassica rapa Bra035929 I 0.749
Bo9g014610 Brassica oleracea Bo9g014610 I 0.749
Bo2g161590 Brassica oleracea Bo2g161590 I 0.749
Bra005949 Brassica rapa Bra005949 I 0.746
cassava46145.m1 Manihot esculenta cassava46145.m1 I 0.740
Bo7g098590 Brassica oleracea Bo7g098590 I 0.739
Bra012961 Brassica rapa Bra012961 I 0.739
Bo3g004500 Brassica oleracea Bo3g004500 I 0.737
Bra029349 Brassica rapa Bra029349 I 0.725
Bo2g161180 Brassica oleracea Bo2g161180 I 0.725
ATMYB122 Arabidopsis lyrata fgenesh2_kg.2__1680__AT1G74080.1 I 0.725
Bra029311 Brassica rapa Bra029311 I 0.724
PK01174.1 Cannabis sativa PK01174.1 I 0.720
Bra025666 Brassica rapa Bra025666 I 0.720
Thhalv10008152m.g Eutrema salsugineum Thhalv10008152m.g I 0.720
Bo5g025570 Brassica oleracea Bo5g025570 I 0.720
MYB28 Arabidopsis lyrata scaffold_802785.1 I 0.719
Cagra.0542s0036 Capsella grandiflora Cagra.0542s0036 I 0.719
Carubv10027861m.g Capsella rubella Carubv10027861m.g I 0.719
MYB28 Arabidopsis thaliana AT5G61420 I 0.719
Bostr.26833s0098 Boechera stricta Bostr.26833s0098 I 0.719
MYB51 Arabidopsis thaliana AT1G18570 D 0.717
Bostr.7128s0464 Boechera stricta Bostr.7128s0464 I 0.717
Cagra.4153s0023 Capsella grandiflora Cagra.4153s0023 I 0.717
Carubv10009563m.g Capsella rubella Carubv10009563m.g I 0.717
MYB51 Arabidopsis lyrata fgenesh2_kg.1__2031__AT1G18570.1 I 0.717
Bo9g014380 Brassica oleracea Bo9g014380 I 0.716
PK27708.1 Cannabis sativa PK27708.1 I 0.712
Bra016553 Brassica rapa Bra016553 I 0.712
Bo8g067910 Brassica oleracea Bo8g067910 I 0.712
Bra031035 Brassica rapa Bra031035 I 0.710
Bo8g104300 Brassica oleracea Bo8g104300 I 0.710
Gorai.003G097900 Gossypium raimondii Gorai.003G097900 I 0.708
Bra035954 Brassica rapa Bra035954 I 0.707
MYB34 Arabidopsis thaliana AT5G60890 I 0.705
Bra013000 Brassica rapa Bra013000 I 0.705
Bostr.26833s0149 Boechera stricta Bostr.26833s0149 I 0.705
Carubv10027524m.g Capsella rubella Carubv10027524m.g I 0.705
ATMYB34 Arabidopsis lyrata fgenesh2_kg.8__2056__AT5G60890.1 I 0.705
Thhalv10004638m.g Eutrema salsugineum Thhalv10004638m.g I 0.705
PK14811.1 Cannabis sativa PK14811.1 I 0.704
MYB76 Arabidopsis thaliana AT5G07700 I 0.704
MYB76 Arabidopsis lyrata Al_scaffold_0006_698 I 0.704
Bo7g098110 Brassica oleracea Bo7g098110 I 0.702
TCM_014091 Theobroma cacao TCM_014091 I 0.697
evm.TU.supercontig_28.71 Carica papaya evm.TU.supercontig_28.71 I 0.689
gene12738-v1.0-hybrid Fragaria vesca gene12738-v1.0-hybrid I 0.685
Carubv10020723m.g Capsella rubella Carubv10020723m.g I 0.684
GSMUA_Achr5G17010_001 Musa acuminata GSMUA_Achr5G17010_001 I 0.672
Bra029350 Brassica rapa Bra029350 I 0.670
Pavir.Ca00232 Panicum virgatum Pavir.Ca00232 I 0.669
Pavir.Ca00231 Panicum virgatum Pavir.Ca00231 I 0.669
GSMUA_Achr10G16010_001 Musa acuminata GSMUA_Achr10G16010_001 I 0.669
Bostr.3288s0058 Boechera stricta Bostr.3288s0058 I 0.669
Eucgr.C03554 Eucalyptus grandis Eucgr.C03554 I 0.667
Lus10041888.g Linum usitatissimum Lus10041888.g I 0.664
Lus10028435.g Linum usitatissimum Lus10028435.g I 0.664
Si011098m.g Setaria italica Si011098m.g I 0.663
Si012585m.g Setaria italica Si012585m.g I 0.663
Si012017m.g Setaria italica Si012017m.g I 0.663
Bo7g117140 Brassica oleracea Bo7g117140 I 0.661
Bra017685 Brassica rapa Bra017685 I 0.661