Gorai.003G097900 (Gossypium raimondii)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Gorai.003G097900 T287513_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB51
M07010_2.00 		Arabidopsis thaliana
NHNHHNHNNNYYYACCWACYW
WRGTWGGTRRRNNNDNDDNDN		 Dap-seq
OMalley et al.(2016)
MYB51_col_a 		0.679 0.742
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.003G097900.1 Myb 14 61
Gorai.003G097900.1 Myb 67 112

Links

Other Myb/SANT family TFs
Other Gossypium raimondii TFs

78 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
TCM_014091 Theobroma cacao TCM_014091 I 0.814
cassava46146.m1 Manihot esculenta cassava46146.m1 I 0.747
cassava47112.m1 Manihot esculenta cassava47112.m1 I 0.746
PK14811.1 Cannabis sativa PK14811.1 I 0.741
Lus10019085.g Linum usitatissimum Lus10019085.g I 0.740
cassava44039.valid.m1 Manihot esculenta cassava44039.valid.m1 I 0.739
MYB29 Arabidopsis thaliana AT5G07690 I 0.725
MYB29 Arabidopsis lyrata fgenesh2_kg.6__738__AT5G07690.1 I 0.725
Bostr.13129s0197 Boechera stricta Bostr.13129s0197 I 0.725
Thhalv10013952m.g Eutrema salsugineum Thhalv10013952m.g I 0.725
MYB34 Arabidopsis thaliana AT5G60890 I 0.713
Bra013000 Brassica rapa Bra013000 I 0.713
ATMYB34 Arabidopsis lyrata fgenesh2_kg.8__2056__AT5G60890.1 I 0.713
Bostr.26833s0149 Boechera stricta Bostr.26833s0149 I 0.713
Carubv10027524m.g Capsella rubella Carubv10027524m.g I 0.713
Thhalv10004638m.g Eutrema salsugineum Thhalv10004638m.g I 0.713
Bo7g098110 Brassica oleracea Bo7g098110 I 0.710
PK01174.1 Cannabis sativa PK01174.1 I 0.709
evm.TU.supercontig_3.239 Carica papaya evm.TU.supercontig_3.239 I 0.708
Bo9g014380 Brassica oleracea Bo9g014380 I 0.707
Cagra.2925s0017 Capsella grandiflora Cagra.2925s0017 I 0.707
Carubv10001328m.g Capsella rubella Carubv10001328m.g I 0.707
cassava46145.m1 Manihot esculenta cassava46145.m1 I 0.702
PK27708.1 Cannabis sativa PK27708.1 I 0.701
Bra035954 Brassica rapa Bra035954 I 0.698
Bo9g175680 Brassica oleracea Bo9g175680 I 0.697
MYB28 Arabidopsis thaliana AT5G61420 I 0.696
Bo2g161590 Brassica oleracea Bo2g161590 I 0.696
Bo9g014610 Brassica oleracea Bo9g014610 I 0.696
Bra035929 Brassica rapa Bra035929 I 0.696
MYB28 Arabidopsis lyrata scaffold_802785.1 I 0.696
Bostr.26833s0098 Boechera stricta Bostr.26833s0098 I 0.696
Cagra.0542s0036 Capsella grandiflora Cagra.0542s0036 I 0.696
Carubv10027861m.g Capsella rubella Carubv10027861m.g I 0.696
Thhalv10004407m.g Eutrema salsugineum Thhalv10004407m.g I 0.696
Bo2g161180 Brassica oleracea Bo2g161180 I 0.694
Bra005949 Brassica rapa Bra005949 I 0.693
gene12738-v1.0-hybrid Fragaria vesca gene12738-v1.0-hybrid I 0.687
Bo7g098590 Brassica oleracea Bo7g098590 I 0.686
Bo8g104300 Brassica oleracea Bo8g104300 I 0.686
Bra012961 Brassica rapa Bra012961 I 0.686
Bra031035 Brassica rapa Bra031035 I 0.686
Bo3g004500 Brassica oleracea Bo3g004500 I 0.684
Bo8g067910 Brassica oleracea Bo8g067910 I 0.684
Bra016553 Brassica rapa Bra016553 I 0.684
GLYMA06G21040 Glycine max GLYMA06G21040 I 0.684
MYB76 Arabidopsis lyrata Al_scaffold_0006_698 I 0.682
MYB76 Arabidopsis thaliana AT5G07700 I 0.682
Bo5g025570 Brassica oleracea Bo5g025570 I 0.682
Bra025666 Brassica rapa Bra025666 I 0.682
Thhalv10008152m.g Eutrema salsugineum Thhalv10008152m.g I 0.682
Bo6g118350 Brassica oleracea Bo6g118350 I 0.681
Bra015939 Brassica rapa Bra015939 I 0.681
ATMYB122 Arabidopsis lyrata fgenesh2_kg.2__1680__AT1G74080.1 I 0.681
MYB51 Arabidopsis thaliana AT1G18570 D 0.679
MYB51 Arabidopsis lyrata fgenesh2_kg.1__2031__AT1G18570.1 I 0.679
Bostr.7128s0464 Boechera stricta Bostr.7128s0464 I 0.679
Cagra.4153s0023 Capsella grandiflora Cagra.4153s0023 I 0.679
Carubv10009563m.g Capsella rubella Carubv10009563m.g I 0.679
Bra029350 Brassica rapa Bra029350 I 0.678
MYB122 Arabidopsis thaliana AT1G74080 I 0.676
Bo2g080900 Brassica oleracea Bo2g080900 I 0.672
Bra029311 Brassica rapa Bra029311 I 0.672
Bra029349 Brassica rapa Bra029349 I 0.669
GSMUA_Achr10G29680_001 Musa acuminata GSMUA_Achr10G29680_001 I 0.669
GLYMA04G33210 Glycine max GLYMA04G33210 I 0.667
Cla009418 Citrullus lanatus Cla009418 I 0.665
Cucsa.069500 Cucumis sativus Cucsa.069500 I 0.665
POPTR_0010s12420 Populus trichocarpa POPTR_0010s12420 I 0.662
VIT_01s0011g04760 Vitis vinifera VIT_01s0011g04760 I 0.662
cassava29110.valid.m1 Manihot esculenta cassava29110.valid.m1 I 0.662
Eucgr.B00865 Eucalyptus grandis Eucgr.B00865 I 0.662
Eucgr.G02195 Eucalyptus grandis Eucgr.G02195 I 0.662
Bra008131 Brassica rapa Bra008131 I 0.661
BRADI3G58770 Brachypodium distachyon BRADI3G58770 I 0.661
Traes_6AL_52227091B Triticum aestivum Traes_6AL_52227091B I 0.661
TRIUR3_23397 Triticum urartu TRIUR3_23397 I 0.661
Thhalv10018705m.g Eutrema salsugineum Thhalv10018705m.g I 0.661