Pvit_16227 (Pogona vitticeps)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Pvit_16227 T047760_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MAX
M00938_2.00 		Homo sapiens
CCACGTGH
DCACGTGG		 PBM
Guo et al.(2014)
Max_L 		0.914 1.000
Max
M00121_2.00 		Mus musculus
NCRCRTGNN
NNCAYGYGN		 PBM
Badis et al.(2009)
Max_3863 		0.914 1.000
Max
M00122_2.00 		Mus musculus
NNCRCRTGN
NCAYGYGNN		 PBM
Badis et al.(2009)
Max_3864 		0.914 1.000
Max
M01753_2.00 		Mus musculus
NCAYGYKNN
NNMRCRTGN		 PBM
Weirauch et al.(2014)
pTH4381 		0.914 1.000
Max
M08778_2.00 		Mus musculus
VVVCACGYGSN
NSCRCGTGBBB		 Misc
Kulakovskiy et al.(2013)
MAX_MOUSE.H11MO.0.A 		0.914 1.000
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pvit_16227 bHLH 11 62

Links

Other bHLH family TFs
Other Pogona vitticeps TFs

113 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CSP4 Arabidopsis thaliana AT2G21060 D 0.000
CSP2 Arabidopsis thaliana AT4G38680 I 0.000
Bo3g141510 Brassica oleracea Bo3g141510 I 0.000
Bo4g145670 Brassica oleracea Bo4g145670 I 0.000
Bo8g102040 Brassica oleracea Bo8g102040 I 0.000
Bostr.25542s0051 Boechera stricta Bostr.25542s0051 I 0.000
Bra030325 Brassica rapa Bra030325 I 0.000
Bra031159 Brassica rapa Bra031159 I 0.000
Cagra.2961s0009 Capsella grandiflora Cagra.2961s0009 I 0.000
cassava12557.valid.m1 Manihot esculenta cassava12557.valid.m1 N 0.000
cassava29163.valid.m1 Manihot esculenta cassava29163.valid.m1 N 0.000
Ca_11038 Cicer arietinum Ca_11038 N 0.000
chr3.CM0112.180.nd Lotus japonicus chr3.CM0112.180.nd N 0.000
Cla016088 Citrullus lanatus Cla016088 N 0.000
Cucsa.381750 Cucumis sativus Cucsa.381750 N 0.000
Eucgr.I01395 Eucalyptus grandis Eucgr.I01395 N 0.000
evm.TU.supercontig_37.170 Carica papaya evm.TU.supercontig_37.170 N 0.000
ATGRP2B Arabidopsis lyrata fgenesh2_kg.4__14__AT2G21060.1 I 0.000
GLYMA04G00660 Glycine max GLYMA04G00660 N 0.000
GLYMA11G11290 Glycine max GLYMA11G11290 N 0.000
GLYMA12G03470 Glycine max GLYMA12G03470 N 0.000
Gorai.002G003500 Gossypium raimondii Gorai.002G003500 N 0.000
Gorai.002G195100 Gossypium raimondii Gorai.002G195100 I 0.000
Gorai.005G253200 Gossypium raimondii Gorai.005G253200 I 0.000
GRMZM2G389768 Zea mays GRMZM2G389768 N 0.000
IGS.gm_9_00317 Chlorella NC64A IGS.gm_9_00317 N 0.000
Lus10005066.g Linum usitatissimum Lus10005066.g N 0.000
Lus10025058.g Linum usitatissimum Lus10025058.g N 0.000
Lus10027839.g Linum usitatissimum Lus10027839.g N 0.000
MDP0000155077 Malus domestica MDP0000155077 N 0.000
MDP0000202739 Malus domestica MDP0000202739 N 0.000
MDP0000225222 Malus domestica MDP0000225222 N 0.000
mgf001526m Mimulus guttatus mgf001526m N 0.000
mgf014458m Mimulus guttatus mgf014458m N 0.000
Pavir.J33226 Panicum virgatum Pavir.J33226 N 0.000
PGSC0003DMG400001590 Solanum tuberosum PGSC0003DMG400001590 N 0.000
PGSC0003DMG400001591 Solanum tuberosum PGSC0003DMG400001591 N 0.000
PGSC0003DMG400023206 Solanum tuberosum PGSC0003DMG400023206 I 0.000
Phatr3_J15211 Phaeodactylum tricornutum Phatr3_J15211 N 0.000
Pm020837 Prunus mume Pm020837 I 0.000
POPTR_0004s17840 Populus trichocarpa POPTR_0004s17840 N 0.000
POPTR_0009s13460 Populus trichocarpa POPTR_0009s13460 N 0.000
SapurV1A.0117s0150 Salix purpurea SapurV1A.0117s0150 N 0.000
SapurV1A.0514s0160 Salix purpurea SapurV1A.0514s0160 N 0.000
Sb04g001720 Sorghum bicolor Sb04g001720 N 0.000
GRP2 Arabidopsis lyrata scaffold_700059.1 I 0.000
Solyc01g111300.2 Solanum lycopersicum Solyc01g111300.2 N 0.000
Solyc10g055250.1 Solanum lycopersicum Solyc10g055250.1 I 0.000
Thhalv10022795m.g Eutrema salsugineum Thhalv10022795m.g N 0.000
VIT_03s0038g02130 Vitis vinifera VIT_03s0038g02130 I 0.000