MDP0000279087 (Malus domestica)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 MDP0000279087 T050416_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
OS01G0235700
M09894_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$BHLH66_01 		0.914 1.000
MYC2
M01699_2.00 		Arabidopsis thaliana
NNCACGTGNN
NNCACGTGNN		 PBM
Weirauch et al.(2014)
pTH8083 		0.890 0.896
PK18474.1
M01127_2.00 		Cannabis sativa
NRCACGTGCN
NGCACGTGYN		 PBM
Lambert et al.(2019)
pTH10273 		0.890 0.896
PK18474.1
M01768_2.00 		Cannabis sativa
NCACGWK
MWCGTGN		 PBM
Weirauch et al.(2014)
pTH9589 		0.890 0.896
MYC4
M01707_2.00 		Arabidopsis thaliana
NNCACGTGNN
NNCACGTGNN		 PBM
Weirauch et al.(2014)
pTH8260 		0.890 0.875
MYC3
M01712_2.00 		Arabidopsis thaliana
MWYGTGNNNN
NNNNCACRWK		 PBM
Weirauch et al.(2014)
pTH8854 		0.890 0.875
AT2G22750
M06730_2.00 		Arabidopsis thaliana
MRYGTKDNHCACGTGNN
NNCACGTGDNHMACRYK		 Dap-seq
OMalley et al.(2016)
bHLH18_col_a 		0.882 0.625
BHLH13
M01698_2.00 		Arabidopsis thaliana
MCACGTGV
BCACGTGK		 PBM
Weirauch et al.(2014)
pTH7565 		0.879 0.875
UNE10
M01705_2.00 		Arabidopsis thaliana
HCACGTGM
KCACGTGD		 PBM
Weirauch et al.(2014)
pTH8112 		0.843 0.500
PK09702.1
M01124_2.00 		Cannabis sativa
GCACGTGV
BCACGTGC		 PBM
Lambert et al.(2019)
pTH11374 		0.840 0.625
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MDP0000279087 bHLH 49 96

Links

Other bHLH family TFs
Other Malus domestica TFs

672 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Al_scaffold_0002_1233 Arabidopsis lyrata Al_scaffold_0002_1233 I
WRKY62 Arabidopsis lyrata Al_scaffold_0006_13 I
WRKY67 Arabidopsis thaliana AT1G66550 I
WRKY64 Arabidopsis thaliana AT1G66560 I
WRKY63 Arabidopsis thaliana AT1G66600 D
WRKY66 Arabidopsis thaliana AT1G80590 I
WRKY62 Arabidopsis thaliana AT5G01900 D
WRKY38 Arabidopsis thaliana AT5G22570 D
BGIOSGA004703 Oryza indica BGIOSGA004703 I
BGIOSGA017860 Oryza indica BGIOSGA017860 I
BGIOSGA030113 Oryza indica BGIOSGA030113 I
BGIOSGA030346 Oryza indica BGIOSGA030346 I
Bo01002s040 Brassica oleracea Bo01002s040 I
Bo2g024040 Brassica oleracea Bo2g024040 I
Bo2g095820 Brassica oleracea Bo2g095820 I
Bo5g068250 Brassica oleracea Bo5g068250 I
Bostr.20129s0455 Boechera stricta Bostr.20129s0455 I
Bostr.25463s0359 Boechera stricta Bostr.25463s0359 I
Bostr.26527s0018 Boechera stricta Bostr.26527s0018 I
Bostr.26959s0259 Boechera stricta Bostr.26959s0259 I
Bostr.26959s0261 Boechera stricta Bostr.26959s0261 I
Bostr.26959s0262 Boechera stricta Bostr.26959s0262 I
Bostr.5022s0087 Boechera stricta Bostr.5022s0087 I
Bostr.6251s0160 Boechera stricta Bostr.6251s0160 I
Bra002421 Brassica rapa Bra002421 I
Bra008454 Brassica rapa Bra008454 I
Bra008456 Brassica rapa Bra008456 I
Bra008459 Brassica rapa Bra008459 I
Bra020196 Brassica rapa Bra020196 I
Bra020197 Brassica rapa Bra020197 I
Bra023211 Brassica rapa Bra023211 I
Bra028918 Brassica rapa Bra028918 I
Cagra.0255s0014 Capsella grandiflora Cagra.0255s0014 I
Cagra.15225s0001 Capsella grandiflora Cagra.15225s0001 I
Cagra.20277s0001 Capsella grandiflora Cagra.20277s0001 I
Cagra.8153s0001 Capsella grandiflora Cagra.8153s0001 I
Carubv10002472m.g Capsella rubella Carubv10002472m.g I
Carubv10012720m.g Capsella rubella Carubv10012720m.g I
Carubv10021420m.g Capsella rubella Carubv10021420m.g I
Carubv10021860m.g Capsella rubella Carubv10021860m.g I
Carubv10021899m.g Capsella rubella Carubv10021899m.g I
Carubv10022120m.g Capsella rubella Carubv10022120m.g I
Carubv10022162m.g Capsella rubella Carubv10022162m.g I
Ca_18932 Cicer arietinum Ca_18932 I
Cucsa.177060 Cucumis sativus Cucsa.177060 I
evm.TU.supercontig_86.64 Carica papaya evm.TU.supercontig_86.64 I
evm.TU.supercontig_86.65 Carica papaya evm.TU.supercontig_86.65 I
F775_03183 Aegilops tauschii F775_03183 N
F775_22564 Aegilops tauschii F775_22564 I
WRKY67 Arabidopsis lyrata fgenesh1_pg.C_scaffold_2000969 I
GRMZM2G029292 Zea mays GRMZM2G029292 I
GRMZM2G158328 Zea mays GRMZM2G158328 I
GRMZM2G382350 Zea mays GRMZM2G382350 I
GSMUA_Achr7G22020_001 Musa acuminata GSMUA_Achr7G22020_001 I
GSMUA_Achr8G25110_001 Musa acuminata GSMUA_Achr8G25110_001 I
LPERR05G16170 Leersia perrieri LPERR05G16170 I
LPERR11G00960 Leersia perrieri LPERR11G00960 I
mgf002542m Mimulus guttatus mgf002542m I
MLOC_22356 Hordeum vulgare MLOC_22356 I
MLOC_6114 Hordeum vulgare MLOC_6114 I
MTR_5g067680 Medicago truncatula MTR_5g067680 I
MTR_8g005750 Medicago truncatula MTR_8g005750 I
OB05G17240 Oryza brachyantha OB05G17240 I
OB05G27830 Oryza brachyantha OB05G27830 I
OB05G27850 Oryza brachyantha OB05G27850 I
OBART05G20340 Oryza barthii OBART05G20340 I
OGLUM05G21420 Oryza glumaepatula OGLUM05G21420 I
OGLUM05G21470 Oryza glumaepatula OGLUM05G21470 I
OLONG_002978 Oryza longistaminata OLONG_002978 I
OLONG_027124 Oryza longistaminata OLONG_027124 I
OMERI05G18170 Oryza meridionalis OMERI05G18170 I
OMERI05G18250 Oryza meridionalis OMERI05G18250 I
OMERI05G18260 Oryza meridionalis OMERI05G18260 I
ONIVA01G40340 Oryza nivara ONIVA01G40340 I
ONIVA05G21440 Oryza nivara ONIVA05G21440 I
ONIVA05G21460 Oryza nivara ONIVA05G21460 I
ONIVA09G03360 Oryza nivara ONIVA09G03360 I
OPUNC05G17980 Oryza punctata OPUNC05G17980 I
OPUNC05G18000 Oryza punctata OPUNC05G18000 I
ORGLA01G0291800 Oryza glaberrima ORGLA01G0291800 I
ORGLA05G0177200 Oryza glaberrima ORGLA05G0177200 I
ORGLA09G0026100 Oryza glaberrima ORGLA09G0026100 I
ORUFI01G38660 Oryza rufipogon ORUFI01G38660 I
ORUFI05G21560 Oryza rufipogon ORUFI05G21560 I
ORUFI05G21600 Oryza rufipogon ORUFI05G21600 I
OS01G0820700 Oryza sativa OS01G0820700 I
OS05G0478400 Oryza sativa OS05G0478400 I
OS05G0478800 Oryza sativa OS05G0478800 I
Pavir.Ca00459 Panicum virgatum Pavir.Ca00459 I
Pavir.Cb02194 Panicum virgatum Pavir.Cb02194 I
Pavir.Eb03559 Panicum virgatum Pavir.Eb03559 I
Pavir.Gb01556 Panicum virgatum Pavir.Gb01556 I
Pavir.Ha01933 Panicum virgatum Pavir.Ha01933 I
Pavir.J31756 Panicum virgatum Pavir.J31756 I
Pavir.J39511 Panicum virgatum Pavir.J39511 I
Sb03g038170 Sorghum bicolor Sb03g038170 I
WRKY38 Arabidopsis lyrata scaffold_602308.1 I
Si004791m.g Setaria italica Si004791m.g I
Si012735m.g Setaria italica Si012735m.g I
TCM_019689 Theobroma cacao TCM_019689 I
Thhalv10000686m.g Eutrema salsugineum Thhalv10000686m.g I
Thhalv10014700m.g Eutrema salsugineum Thhalv10014700m.g I
Thhalv10015295m.g Eutrema salsugineum Thhalv10015295m.g I
Thhalv10029232m.g Eutrema salsugineum Thhalv10029232m.g I
Traes_3B_8B0D448D8 Triticum aestivum Traes_3B_8B0D448D8 I
Traes_3DS_9A02CF31D Triticum aestivum Traes_3DS_9A02CF31D I
TRIUR3_27575 Triticum urartu TRIUR3_27575 I
TRIUR3_33054 Triticum urartu TRIUR3_33054 I
VIT_08s0058g01390 Vitis vinifera VIT_08s0058g01390 I