Sakowv30033343m.g (Saccoglossus kowalevskii)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Sakowv30033343m.g T142424_2.00 JGI:Metazome (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ovo
M03669_2.00 		Drosophila melanogaster
DNMCCGTTA
TAACGGKNH		 SELEX
Nitta et al.(2015)
ovo_1 		0.770 0.797
ovo
M06064_2.00 		Drosophila melanogaster
CHGTTAHW
WDTAACDG		 B1H
Zhu et al.(2011)
ovo_FlyReg_FBgn0003028 		0.770 0.797
ovo
M06065_2.00 		Drosophila melanogaster
RGTHCCGTTAT
ATAACGGDACY		 B1H
Zhu et al.(2011)
ovo_SANGER_5_FBgn0003028 		0.770 0.797
ovo
M06066_2.00 		Drosophila melanogaster
DDTMCCGTTABNYN
NRNVTAACGGKAHH		 B1H
Zhu et al.(2011)
ovo_SOLEXA_5_FBgn0003028 		0.770 0.797
ovo
M02671_2.00 		Drosophila melanogaster
DCNGTTWSD
HSWAACNGH		 SELEX
Mathelier et al.(2014)
MA0126.1 		0.770 0.797
ovo
M09662_2.00 		Drosophila melanogaster
DCNGTTAMWNNDV
BHNNWKTAACNGH		 Misc
Kulakovskiy et al.(2009)
ovo 		0.770 0.797
ovo
M10373_2.00 		Drosophila melanogaster
NNNDCNGTTWSDDNN
NNHHSWAACNGHNNN		 Transfac
Matys et al.(2006)
I$OVO_01 		0.770 0.797
ovo
M10374_2.00 		Drosophila melanogaster Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
I$OVO_Q6 		0.770 0.797
lin-48
M00614_2.00 		Caenorhabditis elegans
HCCGTTAB
VTAACGGD		 PBM
Narasimhan et al.(2015)
pTH9155 		0.770 0.783
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
23915419_peptide C2H2 ZF 366 388
23915419_peptide C2H2 ZF 394 416
23915419_peptide C2H2 ZF 422 445
23915420_peptide C2H2 ZF 351 373
23915420_peptide C2H2 ZF 379 401
23915420_peptide C2H2 ZF 407 430
23915421_peptide C2H2 ZF 351 373
23915421_peptide C2H2 ZF 379 401
23915421_peptide C2H2 ZF 407 430
23915422_peptide C2H2 ZF 283 305
23915422_peptide C2H2 ZF 311 333
23915422_peptide C2H2 ZF 339 362

Links

Other C2H2 ZF family TFs
Other Saccoglossus kowalevskii TFs

61 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAEL017521 Aedes aegypti AAEL017521 I 0.766
AARA001055 Anopheles arabiensis AARA001055 I 0.766
AATE002741 Anopheles atroparvus AATE002741 I 0.766
ACEP17857 Atta cephalotes ACEP17857 I 0.770
ACHR004136 Anopheles christyi ACHR004136 I 0.766
ACUA027175 Anopheles culicifacies ACUA027175 I 0.766
ACYPI003064 Acyrthosiphon pisum ACYPI003064 I 0.766
ADAC004491 Anopheles darlingi ADAC004491 I 0.766
ADIR001008 Anopheles dirus ADIR001008 I 0.766
AFUN010393 Anopheles funestus AFUN010393 I 0.766
AGAP000114 Anopheles gambiae AGAP000114 I 0.766
AMEC022552 Anopheles melas AMEC022552 I 0.766
AMEM014020 Anopheles merus AMEM014020 I 0.766
ASIS014406 Anopheles sinensis ASIS014406 I 0.766
ASTEI07557 Anopheles stephensi ASTEI07557 I 0.766
BGIBMGA000988 Bombyx mori BGIBMGA000988 I 0.770
Bm3814 Brugia malayi Bm3814 I 0.766
BTMF_0001741201 Brugia timori BTMF_0001741201 I 0.766
CapteG147941 Capitella teleta CapteG147941 I 0.774
CBG09216 Caenorhabditis briggsae CBG09216 I 0.770
CBN00506 Caenorhabditis brenneri CBN00506 I 0.786
Cflo_08035--XP_624482.2_APIME Camponotus floridanus Cflo_08035--XP_624482.2_APIME I 0.770
CJA03277 Caenorhabditis japonica CJA03277 I 0.770
CJA37604 Caenorhabditis japonica CJA37604 I 0.770
CLEC002514 Cimex lectularius CLEC002514 I 0.766
CPIJ018505 Culex quinquefasciatus CPIJ018505 I 0.766
CpipJ_CPIJ018505 Culex pipiens CpipJ_CPIJ018505 I 0.766
CRE25436 Caenorhabditis remanei CRE25436 I 0.770
ovo Drosophila melanogaster FBgn0003028 D 0.770
ovo Drosophila virilis FBgn0064309 I 0.770
GF20355 Drosophila ananassae FBgn0097362 I 0.770
GG18741 Drosophila erecta FBgn0110950 I 0.770
GH24684 Drosophila grimshawi FBgn0132140 I 0.770
GI21666 Drosophila mojavensis FBgn0144396 I 0.770
GL26817 Drosophila persimilis FBgn0164398 I 0.770
GM12381 Drosophila sechellia FBgn0167318 I 0.770
GD24377 Drosophila simulans FBgn0195718 I 0.770
GK10250 Drosophila willistoni FBgn0212265 I 0.770
GE16381 Drosophila yakuba FBgn0233910 I 0.770
GA22634 Drosophila pseudoobscura FBgn0244037 I 0.770
GB51354 Apis mellifera GB51354 I 0.770
HCOI01936300 Haemonchus contortus HCOI01936300 I 0.770
HHAL005991-PA Halyomorpha halys HHAL005991-PA I 0.766
HMEL006827 Heliconius melpomene HMEL006827 I 0.766
ISCW013547 Ixodes scapularis ISCW013547 I 0.770
KGM_02259 Danaus plexippus KGM_02259 I 0.770
L798_11303 Zootermopsis nevadensis L798_11303 I 0.766
L898_g2421 Steinernema monticolum L898_g2421 I 0.770
LCUP004963 Lucilia cuprina LCUP004963 I 0.766
LDEC009536 Leptinotarsa decemlineata LDEC009536 I 0.766
MCINX009401 Melitaea cinxia MCINX009401 I 0.770
NECAME_03083 Necator americanus NECAME_03083 I 0.774
PHUM086430 Pediculus humanus PHUM086430 I 0.770
PPAI008669 Phlebotomus papatasi PPAI008669 I 0.766
RPRC002781 Rhodnius prolixus RPRC002781 I 0.766
SINV17081 Solenopsis invicta SINV17081 I 0.770
SPU_012448 Strongylocentrotus purpuratus SPU_012448 I 0.787
TC008099 Tribolium castaneum TC008099 I 0.766
TELCIR_07985 Teladorsagia circumcincta TELCIR_07985 I 0.770
lin-48 Caenorhabditis elegans WBGene00003033 D 0.770