Sakowv30033343m.g (Saccoglossus kowalevskii)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Sakowv30033343m.g T142424_2.00 JGI:Metazome (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ovo
M03669_2.00 		Drosophila melanogaster
DNMCCGTTA
TAACGGKNH		 SELEX
Nitta et al.(2015)
ovo_1 		0.770 0.797
ovo
M06064_2.00 		Drosophila melanogaster
CHGTTAHW
WDTAACDG		 B1H
Zhu et al.(2011)
ovo_FlyReg_FBgn0003028 		0.770 0.797
ovo
M06065_2.00 		Drosophila melanogaster
RGTHCCGTTAT
ATAACGGDACY		 B1H
Zhu et al.(2011)
ovo_SANGER_5_FBgn0003028 		0.770 0.797
ovo
M06066_2.00 		Drosophila melanogaster
DDTMCCGTTABNYN
NRNVTAACGGKAHH		 B1H
Zhu et al.(2011)
ovo_SOLEXA_5_FBgn0003028 		0.770 0.797
ovo
M02671_2.00 		Drosophila melanogaster
DCNGTTWSD
HSWAACNGH		 SELEX
Mathelier et al.(2014)
MA0126.1 		0.770 0.797
ovo
M09662_2.00 		Drosophila melanogaster
DCNGTTAMWNNDV
BHNNWKTAACNGH		 Misc
Kulakovskiy et al.(2009)
ovo 		0.770 0.797
ovo
M10373_2.00 		Drosophila melanogaster
NNNDCNGTTWSDDNN
NNHHSWAACNGHNNN		 Transfac
Matys et al.(2006)
I$OVO_01 		0.770 0.797
ovo
M10374_2.00 		Drosophila melanogaster Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
I$OVO_Q6 		0.770 0.797
lin-48
M00614_2.00 		Caenorhabditis elegans
HCCGTTAB
VTAACGGD		 PBM
Narasimhan et al.(2015)
pTH9155 		0.770 0.783
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
23915419_peptide C2H2 ZF 366 388
23915419_peptide C2H2 ZF 394 416
23915419_peptide C2H2 ZF 422 445
23915420_peptide C2H2 ZF 351 373
23915420_peptide C2H2 ZF 379 401
23915420_peptide C2H2 ZF 407 430
23915421_peptide C2H2 ZF 351 373
23915421_peptide C2H2 ZF 379 401
23915421_peptide C2H2 ZF 407 430
23915422_peptide C2H2 ZF 283 305
23915422_peptide C2H2 ZF 311 333
23915422_peptide C2H2 ZF 339 362

Links

Other C2H2 ZF family TFs
Other Saccoglossus kowalevskii TFs

61 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SPU_012448 Strongylocentrotus purpuratus SPU_012448 I 0.787
CBN00506 Caenorhabditis brenneri CBN00506 I 0.786
CapteG147941 Capitella teleta CapteG147941 I 0.774
NECAME_03083 Necator americanus NECAME_03083 I 0.774
ACEP17857 Atta cephalotes ACEP17857 I 0.770
BGIBMGA000988 Bombyx mori BGIBMGA000988 I 0.770
CBG09216 Caenorhabditis briggsae CBG09216 I 0.770
CJA03277 Caenorhabditis japonica CJA03277 I 0.770
CJA37604 Caenorhabditis japonica CJA37604 I 0.770
CRE25436 Caenorhabditis remanei CRE25436 I 0.770
ovo Drosophila melanogaster FBgn0003028 D 0.770
ovo Drosophila virilis FBgn0064309 I 0.770
GF20355 Drosophila ananassae FBgn0097362 I 0.770
GG18741 Drosophila erecta FBgn0110950 I 0.770
GH24684 Drosophila grimshawi FBgn0132140 I 0.770
GI21666 Drosophila mojavensis FBgn0144396 I 0.770
GL26817 Drosophila persimilis FBgn0164398 I 0.770
GM12381 Drosophila sechellia FBgn0167318 I 0.770
GD24377 Drosophila simulans FBgn0195718 I 0.770
GK10250 Drosophila willistoni FBgn0212265 I 0.770
GE16381 Drosophila yakuba FBgn0233910 I 0.770
GA22634 Drosophila pseudoobscura FBgn0244037 I 0.770
GB51354 Apis mellifera GB51354 I 0.770
ISCW013547 Ixodes scapularis ISCW013547 I 0.770
KGM_02259 Danaus plexippus KGM_02259 I 0.770
MCINX009401 Melitaea cinxia MCINX009401 I 0.770
PHUM086430 Pediculus humanus PHUM086430 I 0.770
SINV17081 Solenopsis invicta SINV17081 I 0.770
lin-48 Caenorhabditis elegans WBGene00003033 D 0.770
Cflo_08035--XP_624482.2_APIME Camponotus floridanus Cflo_08035--XP_624482.2_APIME I 0.770
HCOI01936300 Haemonchus contortus HCOI01936300 I 0.770
L898_g2421 Steinernema monticolum L898_g2421 I 0.770
TELCIR_07985 Teladorsagia circumcincta TELCIR_07985 I 0.770
CpipJ_CPIJ018505 Culex pipiens CpipJ_CPIJ018505 I 0.766
AAEL017521 Aedes aegypti AAEL017521 I 0.766
ACYPI003064 Acyrthosiphon pisum ACYPI003064 I 0.766
ADAC004491 Anopheles darlingi ADAC004491 I 0.766
AGAP000114 Anopheles gambiae AGAP000114 I 0.766
Bm3814 Brugia malayi Bm3814 I 0.766
CPIJ018505 Culex quinquefasciatus CPIJ018505 I 0.766
HMEL006827 Heliconius melpomene HMEL006827 I 0.766
L798_11303 Zootermopsis nevadensis L798_11303 I 0.766
RPRC002781 Rhodnius prolixus RPRC002781 I 0.766
TC008099 Tribolium castaneum TC008099 I 0.766
CLEC002514 Cimex lectularius CLEC002514 I 0.766
HHAL005991-PA Halyomorpha halys HHAL005991-PA I 0.766
LCUP004963 Lucilia cuprina LCUP004963 I 0.766
LDEC009536 Leptinotarsa decemlineata LDEC009536 I 0.766
AARA001055 Anopheles arabiensis AARA001055 I 0.766
AATE002741 Anopheles atroparvus AATE002741 I 0.766
ACHR004136 Anopheles christyi ACHR004136 I 0.766
ACUA027175 Anopheles culicifacies ACUA027175 I 0.766
ADIR001008 Anopheles dirus ADIR001008 I 0.766
AFUN010393 Anopheles funestus AFUN010393 I 0.766
AMEC022552 Anopheles melas AMEC022552 I 0.766
AMEM014020 Anopheles merus AMEM014020 I 0.766
ASIS014406 Anopheles sinensis ASIS014406 I 0.766
ASTEI07557 Anopheles stephensi ASTEI07557 I 0.766
PPAI008669 Phlebotomus papatasi PPAI008669 I 0.766
BTMF_0001741201 Brugia timori BTMF_0001741201 I 0.766