CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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L898_g2421
(
Steinernema monticolum
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
L898_g2421
T154771_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
lin-48
M00614_2.00
Caenorhabditis elegans
HCCGTTAB
VTAACGGD
PBM
Narasimhan et al.(2015)
pTH9155
0.800
0.899
ovo
M03669_2.00
Drosophila melanogaster
DNMCCGTTA
TAACGGKNH
SELEX
Nitta et al.(2015)
ovo_1
0.793
0.841
ovo
M06064_2.00
Drosophila melanogaster
CHGTTAHW
WDTAACDG
B1H
Zhu et al.(2011)
ovo_FlyReg_FBgn0003028
0.793
0.841
ovo
M06065_2.00
Drosophila melanogaster
RGTHCCGTTAT
ATAACGGDACY
B1H
Zhu et al.(2011)
ovo_SANGER_5_FBgn0003028
0.793
0.841
ovo
M06066_2.00
Drosophila melanogaster
DDTMCCGTTABNYN
NRNVTAACGGKAHH
B1H
Zhu et al.(2011)
ovo_SOLEXA_5_FBgn0003028
0.793
0.841
ovo
M02671_2.00
Drosophila melanogaster
DCNGTTWSD
HSWAACNGH
SELEX
Mathelier et al.(2014)
MA0126.1
0.793
0.841
ovo
M09662_2.00
Drosophila melanogaster
DCNGTTAMWNNDV
BHNNWKTAACNGH
Misc
Kulakovskiy et al.(2009)
ovo
0.793
0.841
ovo
M10373_2.00
Drosophila melanogaster
NNNDCNGTTWSDDNN
NNHHSWAACNGHNNN
Transfac
Matys et al.(2006)
I$OVO_01
0.793
0.841
ovo
M10374_2.00
Drosophila melanogaster
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
I$OVO_Q6
0.793
0.841
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
L898_g2421.t1
C2H2 ZF
141
163
LSCRTCGKKFHLQRLLNRHAKCH
L898_g2421.t1
C2H2 ZF
169
191
YLCTFCGKGFNDTFDLKRHTRTH
L898_g2421.t1
C2H2 ZF
197
220
YKCEMCEKSFTQRCSLESHMRKVH
Links
Other
C2H2 ZF
family TFs
Other
Steinernema monticolum
TFs
69 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
HCOI01936300
Haemonchus contortus
HCOI01936300
I
0.819
ISCW013547
Ixodes scapularis
ISCW013547
I
0.810
L798_11303
Zootermopsis nevadensis
L798_11303
I
0.809
PHUM086430
Pediculus humanus
PHUM086430
I
0.809
CapteG147941
Capitella teleta
CapteG147941
I
0.804
NECAME_03083
Necator americanus
NECAME_03083
I
0.803
TELCIR_07985
Teladorsagia circumcincta
TELCIR_07985
I
0.803
Bm3814
Brugia malayi
Bm3814
I
0.800
CBG09216
Caenorhabditis briggsae
CBG09216
I
0.800
CBN00506
Caenorhabditis brenneri
CBN00506
I
0.800
CJA03277
Caenorhabditis japonica
CJA03277
I
0.800
CJA37604
Caenorhabditis japonica
CJA37604
I
0.800
CRE25436
Caenorhabditis remanei
CRE25436
I
0.800
lin-48
Caenorhabditis elegans
WBGene00003033
D
0.800
BTMF_0001741201
Brugia timori
BTMF_0001741201
I
0.800
CpipJ_CPIJ018505
Culex pipiens
CpipJ_CPIJ018505
I
0.793
AAEL017521
Aedes aegypti
AAEL017521
I
0.793
ACEP17857
Atta cephalotes
ACEP17857
I
0.793
ADAC004491
Anopheles darlingi
ADAC004491
I
0.793
AGAP000114
Anopheles gambiae
AGAP000114
I
0.793
BGIBMGA000988
Bombyx mori
BGIBMGA000988
I
0.793
CPIJ018505
Culex quinquefasciatus
CPIJ018505
I
0.793
ovo
Drosophila melanogaster
FBgn0003028
D
0.793
ovo
Drosophila virilis
FBgn0064309
I
0.793
GF20355
Drosophila ananassae
FBgn0097362
I
0.793
GG18741
Drosophila erecta
FBgn0110950
I
0.793
GH24684
Drosophila grimshawi
FBgn0132140
I
0.793
GI21666
Drosophila mojavensis
FBgn0144396
I
0.793
GL26817
Drosophila persimilis
FBgn0164398
I
0.793
GM12381
Drosophila sechellia
FBgn0167318
I
0.793
GD24377
Drosophila simulans
FBgn0195718
I
0.793
GK10250
Drosophila willistoni
FBgn0212265
I
0.793
GE16381
Drosophila yakuba
FBgn0233910
I
0.793
GA22634
Drosophila pseudoobscura
FBgn0244037
I
0.793
GB51354
Apis mellifera
GB51354
I
0.793
HMEL006827
Heliconius melpomene
HMEL006827
I
0.793
KGM_02259
Danaus plexippus
KGM_02259
I
0.793
MCINX009401
Melitaea cinxia
MCINX009401
I
0.793
SINV17081
Solenopsis invicta
SINV17081
I
0.793
TC008099
Tribolium castaneum
TC008099
I
0.793
Cflo_08035--XP_624482.2_APIME
Camponotus floridanus
Cflo_08035--XP_624482.2_APIME
I
0.793
LCUP004963
Lucilia cuprina
LCUP004963
I
0.793
LDEC009536
Leptinotarsa decemlineata
LDEC009536
I
0.793
AARA001055
Anopheles arabiensis
AARA001055
I
0.793
AATE002741
Anopheles atroparvus
AATE002741
I
0.793
ACHR004136
Anopheles christyi
ACHR004136
I
0.793
ACUA027175
Anopheles culicifacies
ACUA027175
I
0.793
ADIR001008
Anopheles dirus
ADIR001008
I
0.793
AFUN010393
Anopheles funestus
AFUN010393
I
0.793
AMEC022552
Anopheles melas
AMEC022552
I
0.793
AMEM014020
Anopheles merus
AMEM014020
I
0.793
ASIS014406
Anopheles sinensis
ASIS014406
I
0.793
ASTEI07557
Anopheles stephensi
ASTEI07557
I
0.793
PPAI008669
Phlebotomus papatasi
PPAI008669
I
0.793
ACYPI003064
Acyrthosiphon pisum
ACYPI003064
I
0.790
RPRC002781
Rhodnius prolixus
RPRC002781
I
0.790
CLEC002514
Cimex lectularius
CLEC002514
I
0.790
HHAL005991-PA
Halyomorpha halys
HHAL005991-PA
I
0.790
SMAR006131
Strigamia maritima
SMAR006131
I
0.774
SPU_012448
Strongylocentrotus purpuratus
SPU_012448
I
0.774
MDOA012259
Musca domestica
MDOA012259
I
0.773
tetur12g02740
Tetranychus urticae
tetur12g02740
I
0.770
tetur12g02760
Tetranychus urticae
tetur12g02760
I
0.770
tetur12g02770
Tetranychus urticae
tetur12g02770
I
0.770
tetur12g02810
Tetranychus urticae
tetur12g02810
I
0.770
tetur12g02860
Tetranychus urticae
tetur12g02860
I
0.770
tetur157g00030
Tetranychus urticae
tetur157g00030
I
0.770
Sakowv30033343m.g
Saccoglossus kowalevskii
Sakowv30033343m.g
I
0.770
SBAD_0001064501
Soboliphyme baturini
SBAD_0001064501
I
0.757