CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
GA22634
(
Drosophila pseudoobscura
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
FBgn0244037
T117132_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ovo
M03669_2.00
Drosophila melanogaster
DNMCCGTTA
TAACGGKNH
SELEX
Nitta et al.(2015)
ovo_1
0.827
1.000
ovo
M06064_2.00
Drosophila melanogaster
CHGTTAHW
WDTAACDG
B1H
Zhu et al.(2011)
ovo_FlyReg_FBgn0003028
0.827
1.000
ovo
M06065_2.00
Drosophila melanogaster
RGTHCCGTTAT
ATAACGGDACY
B1H
Zhu et al.(2011)
ovo_SANGER_5_FBgn0003028
0.827
1.000
ovo
M06066_2.00
Drosophila melanogaster
DDTMCCGTTABNYN
NRNVTAACGGKAHH
B1H
Zhu et al.(2011)
ovo_SOLEXA_5_FBgn0003028
0.827
1.000
ovo
M02671_2.00
Drosophila melanogaster
DCNGTTWSD
HSWAACNGH
SELEX
Mathelier et al.(2014)
MA0126.1
0.827
1.000
ovo
M09662_2.00
Drosophila melanogaster
DCNGTTAMWNNDV
BHNNWKTAACNGH
Misc
Kulakovskiy et al.(2009)
ovo
0.827
1.000
ovo
M10373_2.00
Drosophila melanogaster
NNNDCNGTTWSDDNN
NNHHSWAACNGHNNN
Transfac
Matys et al.(2006)
I$OVO_01
0.827
1.000
ovo
M10374_2.00
Drosophila melanogaster
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
I$OVO_Q6
0.827
1.000
lin-48
M00614_2.00
Caenorhabditis elegans
HCCGTTAB
VTAACGGD
PBM
Narasimhan et al.(2015)
pTH9155
0.790
0.826
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0272717
C2H2 ZF
1397
1419
FVCRVCMKTFSLQRLLNRHMKCH
FBpp0272717
C2H2 ZF
1425
1447
YLCTFCGKGFNDTFDLKRHTRTH
FBpp0272717
C2H2 ZF
1453
1476
YKCNLCEKSFTQRCSLESHCQKVH
Links
Other
C2H2 ZF
family TFs
Other
Drosophila pseudoobscura
TFs
69 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ovo
Drosophila melanogaster
FBgn0003028
D
0.827
ovo
Drosophila virilis
FBgn0064309
I
0.827
GF20355
Drosophila ananassae
FBgn0097362
I
0.827
GG18741
Drosophila erecta
FBgn0110950
I
0.827
GH24684
Drosophila grimshawi
FBgn0132140
I
0.827
GI21666
Drosophila mojavensis
FBgn0144396
I
0.827
GL26817
Drosophila persimilis
FBgn0164398
I
0.827
GM12381
Drosophila sechellia
FBgn0167318
I
0.827
GD24377
Drosophila simulans
FBgn0195718
I
0.827
GK10250
Drosophila willistoni
FBgn0212265
I
0.827
GE16381
Drosophila yakuba
FBgn0233910
I
0.827
BGIBMGA000988
Bombyx mori
BGIBMGA000988
I
0.821
KGM_02259
Danaus plexippus
KGM_02259
I
0.821
MCINX009401
Melitaea cinxia
MCINX009401
I
0.821
AAEL017521
Aedes aegypti
AAEL017521
I
0.817
ADAC004491
Anopheles darlingi
ADAC004491
I
0.817
AGAP000114
Anopheles gambiae
AGAP000114
I
0.817
HMEL006827
Heliconius melpomene
HMEL006827
I
0.817
LCUP004963
Lucilia cuprina
LCUP004963
I
0.817
AARA001055
Anopheles arabiensis
AARA001055
I
0.817
AATE002741
Anopheles atroparvus
AATE002741
I
0.817
ACHR004136
Anopheles christyi
ACHR004136
I
0.817
ACUA027175
Anopheles culicifacies
ACUA027175
I
0.817
ADIR001008
Anopheles dirus
ADIR001008
I
0.817
AFUN010393
Anopheles funestus
AFUN010393
I
0.817
AMEC022552
Anopheles melas
AMEC022552
I
0.817
AMEM014020
Anopheles merus
AMEM014020
I
0.817
ASIS014406
Anopheles sinensis
ASIS014406
I
0.817
ASTEI07557
Anopheles stephensi
ASTEI07557
I
0.817
PPAI008669
Phlebotomus papatasi
PPAI008669
I
0.817
ACEP17857
Atta cephalotes
ACEP17857
I
0.808
SINV17081
Solenopsis invicta
SINV17081
I
0.808
Cflo_08035--XP_624482.2_APIME
Camponotus floridanus
Cflo_08035--XP_624482.2_APIME
I
0.808
GB51354
Apis mellifera
GB51354
I
0.805
PHUM086430
Pediculus humanus
PHUM086430
I
0.805
CpipJ_CPIJ018505
Culex pipiens
CpipJ_CPIJ018505
I
0.801
CPIJ018505
Culex quinquefasciatus
CPIJ018505
I
0.801
L798_11303
Zootermopsis nevadensis
L798_11303
I
0.801
ACYPI003064
Acyrthosiphon pisum
ACYPI003064
I
0.797
RPRC002781
Rhodnius prolixus
RPRC002781
I
0.797
TC008099
Tribolium castaneum
TC008099
I
0.797
CLEC002514
Cimex lectularius
CLEC002514
I
0.797
HHAL005991-PA
Halyomorpha halys
HHAL005991-PA
I
0.797
LDEC009536
Leptinotarsa decemlineata
LDEC009536
I
0.797
MDOA012259
Musca domestica
MDOA012259
I
0.797
NECAME_03083
Necator americanus
NECAME_03083
I
0.797
CapteG147941
Capitella teleta
CapteG147941
I
0.794
ISCW013547
Ixodes scapularis
ISCW013547
I
0.794
Bm3814
Brugia malayi
Bm3814
I
0.793
BTMF_0001741201
Brugia timori
BTMF_0001741201
I
0.793
HCOI01936300
Haemonchus contortus
HCOI01936300
I
0.793
L898_g2421
Steinernema monticolum
L898_g2421
I
0.793
TELCIR_07985
Teladorsagia circumcincta
TELCIR_07985
I
0.793
CBG09216
Caenorhabditis briggsae
CBG09216
I
0.790
CBN00506
Caenorhabditis brenneri
CBN00506
I
0.790
CJA03277
Caenorhabditis japonica
CJA03277
I
0.790
CJA37604
Caenorhabditis japonica
CJA37604
I
0.790
CRE25436
Caenorhabditis remanei
CRE25436
I
0.790
lin-48
Caenorhabditis elegans
WBGene00003033
D
0.790
SMAR006131
Strigamia maritima
SMAR006131
I
0.778
tetur12g02770
Tetranychus urticae
tetur12g02770
I
0.777
SBAD_0001064501
Soboliphyme baturini
SBAD_0001064501
I
0.777
SPU_012448
Strongylocentrotus purpuratus
SPU_012448
I
0.774
tetur12g02860
Tetranychus urticae
tetur12g02860
I
0.774
tetur12g02740
Tetranychus urticae
tetur12g02740
I
0.773
tetur12g02760
Tetranychus urticae
tetur12g02760
I
0.773
tetur12g02810
Tetranychus urticae
tetur12g02810
I
0.770
Sakowv30033343m.g
Saccoglossus kowalevskii
Sakowv30033343m.g
I
0.770
tetur157g00030
Tetranychus urticae
tetur157g00030
I
0.766